Distribution patterns of the abundance of major bacterial and archaeal groups in Patagonian lakes

Autores
Schiaffino, María Romina; Sánchez, María Laura; Gerea, Marina; Unrein, Fernando; Balagué, Vanessa; Gasol, Josep M.; Izaguirre, Irina
Año de publicación
2016
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
We explored the distribution patterns of bacterial and archaeal abundances at the phylum and class level using cata-lyzed reporter deposition-fluorescencein situhybridization (CARD-FISH), examining the among (across 35 waterbodies) and within-lake (intra-annual seasonality) patterns in Patagonia (Argentina).Alphaproteobacteria,BetaproteobacteriaandActinobacteriaglobally dominated the bacterioplankton, whereasGammaproteobacteriaandArchaeanever exceeded 3and 6% of the community, respectively. The different groups showed seasonality, with simultaneous peaks of all bacter-ial group absolute abundances during late winter or spring, and with peaks ofArchaeaduring winter, late spring andsummer. The bacterial groups presented roughly similar relative abundances in all seasons, whereasArchaeavaried intheir relative contribution to community structure. Multivariate analyses showed that dissolved organic carbon was animportant variable structuring the community at the studied taxonomic resolution (using absolute and relative abun-dances), in both among and within-lake patterns. The absolute abundance of most bacterial groups was significantlyhigher in mesotrophic and eutrophic systems than in oligotrophic ones (exceptActinobacteria), whereas their relativeabundances did not change among trophic states (exceptBacteroidetes). The lake grouping obtained from CARD-FISHwas consistent with previous work using polymerase chain reaction-denaturing gradient gel electrophoresis data: deepoligotrophic lakes clustered together, whereas small and shallow water bodies grouped separately
Fil: Schiaffino, María Romina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro de Investigaciones y Transferencia del Noroeste de la Provincia de Buenos Aires. Universidad Nacional del Noroeste de la Provincia de Buenos Aires. Centro de Investigaciones y Transferencia del Noroeste de la Provincia de Buenos Aires; Argentina
Fil: Sánchez, María Laura. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Ecología, Genética y Evolución de Buenos Aires. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Ecología, Genética y Evolución de Buenos Aires; Argentina
Fil: Gerea, Marina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Patagonia Norte. Instituto de Investigaciones en Biodiversidad y Medioambiente. Universidad Nacional del Comahue. Centro Regional Universidad Bariloche. Instituto de Investigaciones en Biodiversidad y Medioambiente; Argentina
Fil: Unrein, Fernando. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - La Plata. Instituto de Investigaciones Biotecnológicas. Instituto de Investigaciones Biotecnológicas ; Argentina
Fil: Balagué, Vanessa. Consejo Superior de Investigaciones Científicas. Institut de Ciències del Mar; España
Fil: Gasol, Josep M.. Consejo Superior de Investigaciones Científicas. Institut de Ciències del Mar; España
Fil: Izaguirre, Irina. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Ecología, Genética y Evolución de Buenos Aires. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Ecología, Genética y Evolución de Buenos Aires; Argentina
Materia
Bacteria
Archaea
Patagonian Water Bodies
Prokaryotic Group Distribution Patterns
Card-Fish
Nivel de accesibilidad
acceso abierto
Condiciones de uso
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
Repositorio
CONICET Digital (CONICET)
Institución
Consejo Nacional de Investigaciones Científicas y Técnicas
OAI Identificador
oai:ri.conicet.gov.ar:11336/41605
Acceder
id CONICETDig_ceb1091870fcc5a68a3aa3521d2f5d23
oai_identifier_str oai:ri.conicet.gov.ar:11336/41605
network_acronym_str CONICETDig
repository_id_str 3498
network_name_str CONICET Digital (CONICET)
spelling Distribution patterns of the abundance of major bacterial and archaeal groups in Patagonian lakesSchiaffino, María RominaSánchez, María LauraGerea, MarinaUnrein, FernandoBalagué, VanessaGasol, Josep M.Izaguirre, IrinaBacteriaArchaeaPatagonian Water BodiesProkaryotic Group Distribution PatternsCard-Fishhttps://purl.org/becyt/ford/1.6https://purl.org/becyt/ford/1We explored the distribution patterns of bacterial and archaeal abundances at the phylum and class level using cata-lyzed reporter deposition-fluorescencein situhybridization (CARD-FISH), examining the among (across 35 waterbodies) and within-lake (intra-annual seasonality) patterns in Patagonia (Argentina).Alphaproteobacteria,BetaproteobacteriaandActinobacteriaglobally dominated the bacterioplankton, whereasGammaproteobacteriaandArchaeanever exceeded 3and 6% of the community, respectively. The different groups showed seasonality, with simultaneous peaks of all bacter-ial group absolute abundances during late winter or spring, and with peaks ofArchaeaduring winter, late spring andsummer. The bacterial groups presented roughly similar relative abundances in all seasons, whereasArchaeavaried intheir relative contribution to community structure. Multivariate analyses showed that dissolved organic carbon was animportant variable structuring the community at the studied taxonomic resolution (using absolute and relative abun-dances), in both among and within-lake patterns. The absolute abundance of most bacterial groups was significantlyhigher in mesotrophic and eutrophic systems than in oligotrophic ones (exceptActinobacteria), whereas their relativeabundances did not change among trophic states (exceptBacteroidetes). The lake grouping obtained from CARD-FISHwas consistent with previous work using polymerase chain reaction-denaturing gradient gel electrophoresis data: deepoligotrophic lakes clustered together, whereas small and shallow water bodies grouped separatelyFil: Schiaffino, María Romina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro de Investigaciones y Transferencia del Noroeste de la Provincia de Buenos Aires. Universidad Nacional del Noroeste de la Provincia de Buenos Aires. Centro de Investigaciones y Transferencia del Noroeste de la Provincia de Buenos Aires; ArgentinaFil: Sánchez, María Laura. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Ecología, Genética y Evolución de Buenos Aires. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Ecología, Genética y Evolución de Buenos Aires; ArgentinaFil: Gerea, Marina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Patagonia Norte. Instituto de Investigaciones en Biodiversidad y Medioambiente. Universidad Nacional del Comahue. Centro Regional Universidad Bariloche. Instituto de Investigaciones en Biodiversidad y Medioambiente; ArgentinaFil: Unrein, Fernando. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - La Plata. Instituto de Investigaciones Biotecnológicas. Instituto de Investigaciones Biotecnológicas ; ArgentinaFil: Balagué, Vanessa. Consejo Superior de Investigaciones Científicas. Institut de Ciències del Mar; EspañaFil: Gasol, Josep M.. Consejo Superior de Investigaciones Científicas. Institut de Ciències del Mar; EspañaFil: Izaguirre, Irina. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Ecología, Genética y Evolución de Buenos Aires. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Ecología, Genética y Evolución de Buenos Aires; ArgentinaOxford University Press2016-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfapplication/pdfapplication/pdfapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/41605Schiaffino, María Romina; Sánchez, María Laura; Gerea, Marina; Unrein, Fernando; Balagué, Vanessa; et al.; Distribution patterns of the abundance of major bacterial and archaeal groups in Patagonian lakes; Oxford University Press; Journal of Plankton Research; 38; 1; 1-2016; 64-820142-7873CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/url/https://academic.oup.com/plankt/article/38/1/64/2380231info:eu-repo/semantics/altIdentifier/doi/10.1093/plankt/fbv105info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-sa/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-09-29T09:37:49Zoai:ri.conicet.gov.ar:11336/41605instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-09-29 09:37:49.402CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse
dc.title.none.fl_str_mv Distribution patterns of the abundance of major bacterial and archaeal groups in Patagonian lakes
title Distribution patterns of the abundance of major bacterial and archaeal groups in Patagonian lakes
spellingShingle Distribution patterns of the abundance of major bacterial and archaeal groups in Patagonian lakes
Schiaffino, María Romina
Bacteria
Archaea
Patagonian Water Bodies
Prokaryotic Group Distribution Patterns
Card-Fish
title_short Distribution patterns of the abundance of major bacterial and archaeal groups in Patagonian lakes
title_full Distribution patterns of the abundance of major bacterial and archaeal groups in Patagonian lakes
title_fullStr Distribution patterns of the abundance of major bacterial and archaeal groups in Patagonian lakes
title_full_unstemmed Distribution patterns of the abundance of major bacterial and archaeal groups in Patagonian lakes
title_sort Distribution patterns of the abundance of major bacterial and archaeal groups in Patagonian lakes
dc.creator.none.fl_str_mv Schiaffino, María Romina
Sánchez, María Laura
Gerea, Marina
Unrein, Fernando
Balagué, Vanessa
Gasol, Josep M.
Izaguirre, Irina
author Schiaffino, María Romina
author_facet Schiaffino, María Romina
Sánchez, María Laura
Gerea, Marina
Unrein, Fernando
Balagué, Vanessa
Gasol, Josep M.
Izaguirre, Irina
author_role author
author2 Sánchez, María Laura
Gerea, Marina
Unrein, Fernando
Balagué, Vanessa
Gasol, Josep M.
Izaguirre, Irina
author2_role author
author
author
author
author
author
dc.subject.none.fl_str_mv Bacteria
Archaea
Patagonian Water Bodies
Prokaryotic Group Distribution Patterns
Card-Fish
topic Bacteria
Archaea
Patagonian Water Bodies
Prokaryotic Group Distribution Patterns
Card-Fish
purl_subject.fl_str_mv https://purl.org/becyt/ford/1.6
https://purl.org/becyt/ford/1
dc.description.none.fl_txt_mv We explored the distribution patterns of bacterial and archaeal abundances at the phylum and class level using cata-lyzed reporter deposition-fluorescencein situhybridization (CARD-FISH), examining the among (across 35 waterbodies) and within-lake (intra-annual seasonality) patterns in Patagonia (Argentina).Alphaproteobacteria,BetaproteobacteriaandActinobacteriaglobally dominated the bacterioplankton, whereasGammaproteobacteriaandArchaeanever exceeded 3and 6% of the community, respectively. The different groups showed seasonality, with simultaneous peaks of all bacter-ial group absolute abundances during late winter or spring, and with peaks ofArchaeaduring winter, late spring andsummer. The bacterial groups presented roughly similar relative abundances in all seasons, whereasArchaeavaried intheir relative contribution to community structure. Multivariate analyses showed that dissolved organic carbon was animportant variable structuring the community at the studied taxonomic resolution (using absolute and relative abun-dances), in both among and within-lake patterns. The absolute abundance of most bacterial groups was significantlyhigher in mesotrophic and eutrophic systems than in oligotrophic ones (exceptActinobacteria), whereas their relativeabundances did not change among trophic states (exceptBacteroidetes). The lake grouping obtained from CARD-FISHwas consistent with previous work using polymerase chain reaction-denaturing gradient gel electrophoresis data: deepoligotrophic lakes clustered together, whereas small and shallow water bodies grouped separately
Fil: Schiaffino, María Romina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro de Investigaciones y Transferencia del Noroeste de la Provincia de Buenos Aires. Universidad Nacional del Noroeste de la Provincia de Buenos Aires. Centro de Investigaciones y Transferencia del Noroeste de la Provincia de Buenos Aires; Argentina
Fil: Sánchez, María Laura. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Ecología, Genética y Evolución de Buenos Aires. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Ecología, Genética y Evolución de Buenos Aires; Argentina
Fil: Gerea, Marina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Patagonia Norte. Instituto de Investigaciones en Biodiversidad y Medioambiente. Universidad Nacional del Comahue. Centro Regional Universidad Bariloche. Instituto de Investigaciones en Biodiversidad y Medioambiente; Argentina
Fil: Unrein, Fernando. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - La Plata. Instituto de Investigaciones Biotecnológicas. Instituto de Investigaciones Biotecnológicas ; Argentina
Fil: Balagué, Vanessa. Consejo Superior de Investigaciones Científicas. Institut de Ciències del Mar; España
Fil: Gasol, Josep M.. Consejo Superior de Investigaciones Científicas. Institut de Ciències del Mar; España
Fil: Izaguirre, Irina. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Ecología, Genética y Evolución de Buenos Aires. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Ecología, Genética y Evolución de Buenos Aires; Argentina
description We explored the distribution patterns of bacterial and archaeal abundances at the phylum and class level using cata-lyzed reporter deposition-fluorescencein situhybridization (CARD-FISH), examining the among (across 35 waterbodies) and within-lake (intra-annual seasonality) patterns in Patagonia (Argentina).Alphaproteobacteria,BetaproteobacteriaandActinobacteriaglobally dominated the bacterioplankton, whereasGammaproteobacteriaandArchaeanever exceeded 3and 6% of the community, respectively. The different groups showed seasonality, with simultaneous peaks of all bacter-ial group absolute abundances during late winter or spring, and with peaks ofArchaeaduring winter, late spring andsummer. The bacterial groups presented roughly similar relative abundances in all seasons, whereasArchaeavaried intheir relative contribution to community structure. Multivariate analyses showed that dissolved organic carbon was animportant variable structuring the community at the studied taxonomic resolution (using absolute and relative abun-dances), in both among and within-lake patterns. The absolute abundance of most bacterial groups was significantlyhigher in mesotrophic and eutrophic systems than in oligotrophic ones (exceptActinobacteria), whereas their relativeabundances did not change among trophic states (exceptBacteroidetes). The lake grouping obtained from CARD-FISHwas consistent with previous work using polymerase chain reaction-denaturing gradient gel electrophoresis data: deepoligotrophic lakes clustered together, whereas small and shallow water bodies grouped separately
publishDate 2016
dc.date.none.fl_str_mv 2016-01
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/11336/41605
Schiaffino, María Romina; Sánchez, María Laura; Gerea, Marina; Unrein, Fernando; Balagué, Vanessa; et al.; Distribution patterns of the abundance of major bacterial and archaeal groups in Patagonian lakes; Oxford University Press; Journal of Plankton Research; 38; 1; 1-2016; 64-82
0142-7873
CONICET Digital
CONICET
url http://hdl.handle.net/11336/41605
identifier_str_mv Schiaffino, María Romina; Sánchez, María Laura; Gerea, Marina; Unrein, Fernando; Balagué, Vanessa; et al.; Distribution patterns of the abundance of major bacterial and archaeal groups in Patagonian lakes; Oxford University Press; Journal of Plankton Research; 38; 1; 1-2016; 64-82
0142-7873
CONICET Digital
CONICET
dc.language.none.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv info:eu-repo/semantics/altIdentifier/url/https://academic.oup.com/plankt/article/38/1/64/2380231
info:eu-repo/semantics/altIdentifier/doi/10.1093/plankt/fbv105
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
eu_rights_str_mv openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
dc.format.none.fl_str_mv application/pdf
application/pdf
application/pdf
application/pdf
application/pdf
application/pdf
dc.publisher.none.fl_str_mv Oxford University Press
publisher.none.fl_str_mv Oxford University Press
dc.source.none.fl_str_mv reponame:CONICET Digital (CONICET)
instname:Consejo Nacional de Investigaciones Científicas y Técnicas
reponame_str CONICET Digital (CONICET)
collection CONICET Digital (CONICET)
instname_str Consejo Nacional de Investigaciones Científicas y Técnicas
repository.name.fl_str_mv CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas
repository.mail.fl_str_mv dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar
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score 13.070432

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