Frequent, phylogenetically local horizontal transfer of the cox1 group I intron in flowering plant mitochondria
- Autores
- Sánchez Puerta, María Virginia; Cho, Yangrae; Mower, Jeffrey P.; Alverson, Andrew J.; Palmer, Jeffrey D.
- Año de publicación
- 2008
- Idioma
- inglés
- Tipo de recurso
- artículo
- Estado
- versión publicada
- Descripción
- Horizontal gene transfer is surprisingly common among plant mitochondrial genomes. The first well-established case involves a homing group I intron in the mitochondrial cox1 gene shown to have been frequently acquired via horizontal transfer in angiosperms. Here, we report extensive additional sampling of angiosperms, including 85 newly sequenced introns from 30 families. Analysis of all available data leads us to conclude that, among the 640 angiosperms (from 212 families) whose cox1 intron status has been characterized thus far, the intron has been acquired via roughly 70 separate horizontal transfer events. We propose that the intron was originally seeded into angiosperms by a single transfer from fungi, with all subsequent inferred transfers occurring from one angiosperm to another. The pattern of angiosperm-to- angiosperm transfer is biased toward exchanges between plants belonging to the same family. Illegitimate pollination is proposed as one potential factor responsible for this pattern, given that aberrant, cross-species pollination is more likely between close relatives. Other potential factors include shared vectoring agents or common geographic locations. We report the first apparent cases of loss of the cox1 intron; losses are accompanied by retention of the exonic coconversion tract, which is located immediately downstream of the intron and which is a product of the intron’s self-insertion mechanism. We discuss the many reasons why the cox1 intron is so frequently and detectably transferred, and rarely lost, and conclude that it should be regarded as the ‘‘canary in the coal mine’’ with respect to horizontal transfer in angiosperm mitochondria.
Fil: Sánchez Puerta, María Virginia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Mendoza. Instituto de Biología Agrícola de Mendoza. Universidad Nacional de Cuyo. Facultad de Ciencias Agrarias. Instituto de Biología Agrícola de Mendoza; Argentina. Indiana University; Estados Unidos
Fil: Cho, Yangrae. Indiana University; Estados Unidos
Fil: Mower, Jeffrey P.. Indiana University; Estados Unidos
Fil: Alverson, Andrew J.. Indiana University; Estados Unidos
Fil: Palmer, Jeffrey D.. Indiana University; Estados Unidos - Materia
-
COX1
GROUP 1 INTRON
HORIZONTAL TRANSFER
ANGIOSPERM - Nivel de accesibilidad
- acceso abierto
- Condiciones de uso
- https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
- Repositorio
- Institución
- Consejo Nacional de Investigaciones Científicas y Técnicas
- OAI Identificador
- oai:ri.conicet.gov.ar:11336/157717
Ver los metadatos del registro completo
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Frequent, phylogenetically local horizontal transfer of the cox1 group I intron in flowering plant mitochondriaSánchez Puerta, María VirginiaCho, YangraeMower, Jeffrey P.Alverson, Andrew J.Palmer, Jeffrey D.COX1GROUP 1 INTRONHORIZONTAL TRANSFERANGIOSPERMhttps://purl.org/becyt/ford/1.6https://purl.org/becyt/ford/1Horizontal gene transfer is surprisingly common among plant mitochondrial genomes. The first well-established case involves a homing group I intron in the mitochondrial cox1 gene shown to have been frequently acquired via horizontal transfer in angiosperms. Here, we report extensive additional sampling of angiosperms, including 85 newly sequenced introns from 30 families. Analysis of all available data leads us to conclude that, among the 640 angiosperms (from 212 families) whose cox1 intron status has been characterized thus far, the intron has been acquired via roughly 70 separate horizontal transfer events. We propose that the intron was originally seeded into angiosperms by a single transfer from fungi, with all subsequent inferred transfers occurring from one angiosperm to another. The pattern of angiosperm-to- angiosperm transfer is biased toward exchanges between plants belonging to the same family. Illegitimate pollination is proposed as one potential factor responsible for this pattern, given that aberrant, cross-species pollination is more likely between close relatives. Other potential factors include shared vectoring agents or common geographic locations. We report the first apparent cases of loss of the cox1 intron; losses are accompanied by retention of the exonic coconversion tract, which is located immediately downstream of the intron and which is a product of the intron’s self-insertion mechanism. We discuss the many reasons why the cox1 intron is so frequently and detectably transferred, and rarely lost, and conclude that it should be regarded as the ‘‘canary in the coal mine’’ with respect to horizontal transfer in angiosperm mitochondria.Fil: Sánchez Puerta, María Virginia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Mendoza. Instituto de Biología Agrícola de Mendoza. Universidad Nacional de Cuyo. Facultad de Ciencias Agrarias. Instituto de Biología Agrícola de Mendoza; Argentina. Indiana University; Estados UnidosFil: Cho, Yangrae. Indiana University; Estados UnidosFil: Mower, Jeffrey P.. Indiana University; Estados UnidosFil: Alverson, Andrew J.. Indiana University; Estados UnidosFil: Palmer, Jeffrey D.. Indiana University; Estados UnidosOxford University Press2008-06info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/157717Sánchez Puerta, María Virginia; Cho, Yangrae; Mower, Jeffrey P.; Alverson, Andrew J.; Palmer, Jeffrey D.; Frequent, phylogenetically local horizontal transfer of the cox1 group I intron in flowering plant mitochondria; Oxford University Press; Molecular Biology and Evolution; 25; 8; 6-2008; 1762-17770737-4038CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/doi/10.1093/molbev/msn129info:eu-repo/semantics/altIdentifier/url/https://academic.oup.com/mbe/article/25/8/1762/1116655info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-sa/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-09-10T13:04:39Zoai:ri.conicet.gov.ar:11336/157717instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-09-10 13:04:39.789CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse |
dc.title.none.fl_str_mv |
Frequent, phylogenetically local horizontal transfer of the cox1 group I intron in flowering plant mitochondria |
title |
Frequent, phylogenetically local horizontal transfer of the cox1 group I intron in flowering plant mitochondria |
spellingShingle |
Frequent, phylogenetically local horizontal transfer of the cox1 group I intron in flowering plant mitochondria Sánchez Puerta, María Virginia COX1 GROUP 1 INTRON HORIZONTAL TRANSFER ANGIOSPERM |
title_short |
Frequent, phylogenetically local horizontal transfer of the cox1 group I intron in flowering plant mitochondria |
title_full |
Frequent, phylogenetically local horizontal transfer of the cox1 group I intron in flowering plant mitochondria |
title_fullStr |
Frequent, phylogenetically local horizontal transfer of the cox1 group I intron in flowering plant mitochondria |
title_full_unstemmed |
Frequent, phylogenetically local horizontal transfer of the cox1 group I intron in flowering plant mitochondria |
title_sort |
Frequent, phylogenetically local horizontal transfer of the cox1 group I intron in flowering plant mitochondria |
dc.creator.none.fl_str_mv |
Sánchez Puerta, María Virginia Cho, Yangrae Mower, Jeffrey P. Alverson, Andrew J. Palmer, Jeffrey D. |
author |
Sánchez Puerta, María Virginia |
author_facet |
Sánchez Puerta, María Virginia Cho, Yangrae Mower, Jeffrey P. Alverson, Andrew J. Palmer, Jeffrey D. |
author_role |
author |
author2 |
Cho, Yangrae Mower, Jeffrey P. Alverson, Andrew J. Palmer, Jeffrey D. |
author2_role |
author author author author |
dc.subject.none.fl_str_mv |
COX1 GROUP 1 INTRON HORIZONTAL TRANSFER ANGIOSPERM |
topic |
COX1 GROUP 1 INTRON HORIZONTAL TRANSFER ANGIOSPERM |
purl_subject.fl_str_mv |
https://purl.org/becyt/ford/1.6 https://purl.org/becyt/ford/1 |
dc.description.none.fl_txt_mv |
Horizontal gene transfer is surprisingly common among plant mitochondrial genomes. The first well-established case involves a homing group I intron in the mitochondrial cox1 gene shown to have been frequently acquired via horizontal transfer in angiosperms. Here, we report extensive additional sampling of angiosperms, including 85 newly sequenced introns from 30 families. Analysis of all available data leads us to conclude that, among the 640 angiosperms (from 212 families) whose cox1 intron status has been characterized thus far, the intron has been acquired via roughly 70 separate horizontal transfer events. We propose that the intron was originally seeded into angiosperms by a single transfer from fungi, with all subsequent inferred transfers occurring from one angiosperm to another. The pattern of angiosperm-to- angiosperm transfer is biased toward exchanges between plants belonging to the same family. Illegitimate pollination is proposed as one potential factor responsible for this pattern, given that aberrant, cross-species pollination is more likely between close relatives. Other potential factors include shared vectoring agents or common geographic locations. We report the first apparent cases of loss of the cox1 intron; losses are accompanied by retention of the exonic coconversion tract, which is located immediately downstream of the intron and which is a product of the intron’s self-insertion mechanism. We discuss the many reasons why the cox1 intron is so frequently and detectably transferred, and rarely lost, and conclude that it should be regarded as the ‘‘canary in the coal mine’’ with respect to horizontal transfer in angiosperm mitochondria. Fil: Sánchez Puerta, María Virginia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Mendoza. Instituto de Biología Agrícola de Mendoza. Universidad Nacional de Cuyo. Facultad de Ciencias Agrarias. Instituto de Biología Agrícola de Mendoza; Argentina. Indiana University; Estados Unidos Fil: Cho, Yangrae. Indiana University; Estados Unidos Fil: Mower, Jeffrey P.. Indiana University; Estados Unidos Fil: Alverson, Andrew J.. Indiana University; Estados Unidos Fil: Palmer, Jeffrey D.. Indiana University; Estados Unidos |
description |
Horizontal gene transfer is surprisingly common among plant mitochondrial genomes. The first well-established case involves a homing group I intron in the mitochondrial cox1 gene shown to have been frequently acquired via horizontal transfer in angiosperms. Here, we report extensive additional sampling of angiosperms, including 85 newly sequenced introns from 30 families. Analysis of all available data leads us to conclude that, among the 640 angiosperms (from 212 families) whose cox1 intron status has been characterized thus far, the intron has been acquired via roughly 70 separate horizontal transfer events. We propose that the intron was originally seeded into angiosperms by a single transfer from fungi, with all subsequent inferred transfers occurring from one angiosperm to another. The pattern of angiosperm-to- angiosperm transfer is biased toward exchanges between plants belonging to the same family. Illegitimate pollination is proposed as one potential factor responsible for this pattern, given that aberrant, cross-species pollination is more likely between close relatives. Other potential factors include shared vectoring agents or common geographic locations. We report the first apparent cases of loss of the cox1 intron; losses are accompanied by retention of the exonic coconversion tract, which is located immediately downstream of the intron and which is a product of the intron’s self-insertion mechanism. We discuss the many reasons why the cox1 intron is so frequently and detectably transferred, and rarely lost, and conclude that it should be regarded as the ‘‘canary in the coal mine’’ with respect to horizontal transfer in angiosperm mitochondria. |
publishDate |
2008 |
dc.date.none.fl_str_mv |
2008-06 |
dc.type.none.fl_str_mv |
info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion http://purl.org/coar/resource_type/c_6501 info:ar-repo/semantics/articulo |
format |
article |
status_str |
publishedVersion |
dc.identifier.none.fl_str_mv |
http://hdl.handle.net/11336/157717 Sánchez Puerta, María Virginia; Cho, Yangrae; Mower, Jeffrey P.; Alverson, Andrew J.; Palmer, Jeffrey D.; Frequent, phylogenetically local horizontal transfer of the cox1 group I intron in flowering plant mitochondria; Oxford University Press; Molecular Biology and Evolution; 25; 8; 6-2008; 1762-1777 0737-4038 CONICET Digital CONICET |
url |
http://hdl.handle.net/11336/157717 |
identifier_str_mv |
Sánchez Puerta, María Virginia; Cho, Yangrae; Mower, Jeffrey P.; Alverson, Andrew J.; Palmer, Jeffrey D.; Frequent, phylogenetically local horizontal transfer of the cox1 group I intron in flowering plant mitochondria; Oxford University Press; Molecular Biology and Evolution; 25; 8; 6-2008; 1762-1777 0737-4038 CONICET Digital CONICET |
dc.language.none.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
info:eu-repo/semantics/altIdentifier/doi/10.1093/molbev/msn129 info:eu-repo/semantics/altIdentifier/url/https://academic.oup.com/mbe/article/25/8/1762/1116655 |
dc.rights.none.fl_str_mv |
info:eu-repo/semantics/openAccess https://creativecommons.org/licenses/by-nc-sa/2.5/ar/ |
eu_rights_str_mv |
openAccess |
rights_invalid_str_mv |
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/ |
dc.format.none.fl_str_mv |
application/pdf application/pdf |
dc.publisher.none.fl_str_mv |
Oxford University Press |
publisher.none.fl_str_mv |
Oxford University Press |
dc.source.none.fl_str_mv |
reponame:CONICET Digital (CONICET) instname:Consejo Nacional de Investigaciones Científicas y Técnicas |
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CONICET Digital (CONICET) |
collection |
CONICET Digital (CONICET) |
instname_str |
Consejo Nacional de Investigaciones Científicas y Técnicas |
repository.name.fl_str_mv |
CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas |
repository.mail.fl_str_mv |
dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar |
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1842980161092321280 |
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12.993085 |