Frequent, phylogenetically local horizontal transfer of the cox1 group I intron in flowering plant mitochondria

Autores
Sánchez Puerta, María Virginia; Cho, Yangrae; Mower, Jeffrey P.; Alverson, Andrew J.; Palmer, Jeffrey D.
Año de publicación
2008
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
Horizontal gene transfer is surprisingly common among plant mitochondrial genomes. The first well-established case involves a homing group I intron in the mitochondrial cox1 gene shown to have been frequently acquired via horizontal transfer in angiosperms. Here, we report extensive additional sampling of angiosperms, including 85 newly sequenced introns from 30 families. Analysis of all available data leads us to conclude that, among the 640 angiosperms (from 212 families) whose cox1 intron status has been characterized thus far, the intron has been acquired via roughly 70 separate horizontal transfer events. We propose that the intron was originally seeded into angiosperms by a single transfer from fungi, with all subsequent inferred transfers occurring from one angiosperm to another. The pattern of angiosperm-to- angiosperm transfer is biased toward exchanges between plants belonging to the same family. Illegitimate pollination is proposed as one potential factor responsible for this pattern, given that aberrant, cross-species pollination is more likely between close relatives. Other potential factors include shared vectoring agents or common geographic locations. We report the first apparent cases of loss of the cox1 intron; losses are accompanied by retention of the exonic coconversion tract, which is located immediately downstream of the intron and which is a product of the intron’s self-insertion mechanism. We discuss the many reasons why the cox1 intron is so frequently and detectably transferred, and rarely lost, and conclude that it should be regarded as the ‘‘canary in the coal mine’’ with respect to horizontal transfer in angiosperm mitochondria.
Fil: Sánchez Puerta, María Virginia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Mendoza. Instituto de Biología Agrícola de Mendoza. Universidad Nacional de Cuyo. Facultad de Ciencias Agrarias. Instituto de Biología Agrícola de Mendoza; Argentina. Indiana University; Estados Unidos
Fil: Cho, Yangrae. Indiana University; Estados Unidos
Fil: Mower, Jeffrey P.. Indiana University; Estados Unidos
Fil: Alverson, Andrew J.. Indiana University; Estados Unidos
Fil: Palmer, Jeffrey D.. Indiana University; Estados Unidos
Materia
COX1
GROUP 1 INTRON
HORIZONTAL TRANSFER
ANGIOSPERM
Nivel de accesibilidad
acceso abierto
Condiciones de uso
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
Repositorio
CONICET Digital (CONICET)
Institución
Consejo Nacional de Investigaciones Científicas y Técnicas
OAI Identificador
oai:ri.conicet.gov.ar:11336/157717

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network_name_str CONICET Digital (CONICET)
spelling Frequent, phylogenetically local horizontal transfer of the cox1 group I intron in flowering plant mitochondriaSánchez Puerta, María VirginiaCho, YangraeMower, Jeffrey P.Alverson, Andrew J.Palmer, Jeffrey D.COX1GROUP 1 INTRONHORIZONTAL TRANSFERANGIOSPERMhttps://purl.org/becyt/ford/1.6https://purl.org/becyt/ford/1Horizontal gene transfer is surprisingly common among plant mitochondrial genomes. The first well-established case involves a homing group I intron in the mitochondrial cox1 gene shown to have been frequently acquired via horizontal transfer in angiosperms. Here, we report extensive additional sampling of angiosperms, including 85 newly sequenced introns from 30 families. Analysis of all available data leads us to conclude that, among the 640 angiosperms (from 212 families) whose cox1 intron status has been characterized thus far, the intron has been acquired via roughly 70 separate horizontal transfer events. We propose that the intron was originally seeded into angiosperms by a single transfer from fungi, with all subsequent inferred transfers occurring from one angiosperm to another. The pattern of angiosperm-to- angiosperm transfer is biased toward exchanges between plants belonging to the same family. Illegitimate pollination is proposed as one potential factor responsible for this pattern, given that aberrant, cross-species pollination is more likely between close relatives. Other potential factors include shared vectoring agents or common geographic locations. We report the first apparent cases of loss of the cox1 intron; losses are accompanied by retention of the exonic coconversion tract, which is located immediately downstream of the intron and which is a product of the intron’s self-insertion mechanism. We discuss the many reasons why the cox1 intron is so frequently and detectably transferred, and rarely lost, and conclude that it should be regarded as the ‘‘canary in the coal mine’’ with respect to horizontal transfer in angiosperm mitochondria.Fil: Sánchez Puerta, María Virginia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Mendoza. Instituto de Biología Agrícola de Mendoza. Universidad Nacional de Cuyo. Facultad de Ciencias Agrarias. Instituto de Biología Agrícola de Mendoza; Argentina. Indiana University; Estados UnidosFil: Cho, Yangrae. Indiana University; Estados UnidosFil: Mower, Jeffrey P.. Indiana University; Estados UnidosFil: Alverson, Andrew J.. Indiana University; Estados UnidosFil: Palmer, Jeffrey D.. Indiana University; Estados UnidosOxford University Press2008-06info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/157717Sánchez Puerta, María Virginia; Cho, Yangrae; Mower, Jeffrey P.; Alverson, Andrew J.; Palmer, Jeffrey D.; Frequent, phylogenetically local horizontal transfer of the cox1 group I intron in flowering plant mitochondria; Oxford University Press; Molecular Biology and Evolution; 25; 8; 6-2008; 1762-17770737-4038CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/doi/10.1093/molbev/msn129info:eu-repo/semantics/altIdentifier/url/https://academic.oup.com/mbe/article/25/8/1762/1116655info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-sa/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-09-10T13:04:39Zoai:ri.conicet.gov.ar:11336/157717instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-09-10 13:04:39.789CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse
dc.title.none.fl_str_mv Frequent, phylogenetically local horizontal transfer of the cox1 group I intron in flowering plant mitochondria
title Frequent, phylogenetically local horizontal transfer of the cox1 group I intron in flowering plant mitochondria
spellingShingle Frequent, phylogenetically local horizontal transfer of the cox1 group I intron in flowering plant mitochondria
Sánchez Puerta, María Virginia
COX1
GROUP 1 INTRON
HORIZONTAL TRANSFER
ANGIOSPERM
title_short Frequent, phylogenetically local horizontal transfer of the cox1 group I intron in flowering plant mitochondria
title_full Frequent, phylogenetically local horizontal transfer of the cox1 group I intron in flowering plant mitochondria
title_fullStr Frequent, phylogenetically local horizontal transfer of the cox1 group I intron in flowering plant mitochondria
title_full_unstemmed Frequent, phylogenetically local horizontal transfer of the cox1 group I intron in flowering plant mitochondria
title_sort Frequent, phylogenetically local horizontal transfer of the cox1 group I intron in flowering plant mitochondria
dc.creator.none.fl_str_mv Sánchez Puerta, María Virginia
Cho, Yangrae
Mower, Jeffrey P.
Alverson, Andrew J.
Palmer, Jeffrey D.
author Sánchez Puerta, María Virginia
author_facet Sánchez Puerta, María Virginia
Cho, Yangrae
Mower, Jeffrey P.
Alverson, Andrew J.
Palmer, Jeffrey D.
author_role author
author2 Cho, Yangrae
Mower, Jeffrey P.
Alverson, Andrew J.
Palmer, Jeffrey D.
author2_role author
author
author
author
dc.subject.none.fl_str_mv COX1
GROUP 1 INTRON
HORIZONTAL TRANSFER
ANGIOSPERM
topic COX1
GROUP 1 INTRON
HORIZONTAL TRANSFER
ANGIOSPERM
purl_subject.fl_str_mv https://purl.org/becyt/ford/1.6
https://purl.org/becyt/ford/1
dc.description.none.fl_txt_mv Horizontal gene transfer is surprisingly common among plant mitochondrial genomes. The first well-established case involves a homing group I intron in the mitochondrial cox1 gene shown to have been frequently acquired via horizontal transfer in angiosperms. Here, we report extensive additional sampling of angiosperms, including 85 newly sequenced introns from 30 families. Analysis of all available data leads us to conclude that, among the 640 angiosperms (from 212 families) whose cox1 intron status has been characterized thus far, the intron has been acquired via roughly 70 separate horizontal transfer events. We propose that the intron was originally seeded into angiosperms by a single transfer from fungi, with all subsequent inferred transfers occurring from one angiosperm to another. The pattern of angiosperm-to- angiosperm transfer is biased toward exchanges between plants belonging to the same family. Illegitimate pollination is proposed as one potential factor responsible for this pattern, given that aberrant, cross-species pollination is more likely between close relatives. Other potential factors include shared vectoring agents or common geographic locations. We report the first apparent cases of loss of the cox1 intron; losses are accompanied by retention of the exonic coconversion tract, which is located immediately downstream of the intron and which is a product of the intron’s self-insertion mechanism. We discuss the many reasons why the cox1 intron is so frequently and detectably transferred, and rarely lost, and conclude that it should be regarded as the ‘‘canary in the coal mine’’ with respect to horizontal transfer in angiosperm mitochondria.
Fil: Sánchez Puerta, María Virginia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Mendoza. Instituto de Biología Agrícola de Mendoza. Universidad Nacional de Cuyo. Facultad de Ciencias Agrarias. Instituto de Biología Agrícola de Mendoza; Argentina. Indiana University; Estados Unidos
Fil: Cho, Yangrae. Indiana University; Estados Unidos
Fil: Mower, Jeffrey P.. Indiana University; Estados Unidos
Fil: Alverson, Andrew J.. Indiana University; Estados Unidos
Fil: Palmer, Jeffrey D.. Indiana University; Estados Unidos
description Horizontal gene transfer is surprisingly common among plant mitochondrial genomes. The first well-established case involves a homing group I intron in the mitochondrial cox1 gene shown to have been frequently acquired via horizontal transfer in angiosperms. Here, we report extensive additional sampling of angiosperms, including 85 newly sequenced introns from 30 families. Analysis of all available data leads us to conclude that, among the 640 angiosperms (from 212 families) whose cox1 intron status has been characterized thus far, the intron has been acquired via roughly 70 separate horizontal transfer events. We propose that the intron was originally seeded into angiosperms by a single transfer from fungi, with all subsequent inferred transfers occurring from one angiosperm to another. The pattern of angiosperm-to- angiosperm transfer is biased toward exchanges between plants belonging to the same family. Illegitimate pollination is proposed as one potential factor responsible for this pattern, given that aberrant, cross-species pollination is more likely between close relatives. Other potential factors include shared vectoring agents or common geographic locations. We report the first apparent cases of loss of the cox1 intron; losses are accompanied by retention of the exonic coconversion tract, which is located immediately downstream of the intron and which is a product of the intron’s self-insertion mechanism. We discuss the many reasons why the cox1 intron is so frequently and detectably transferred, and rarely lost, and conclude that it should be regarded as the ‘‘canary in the coal mine’’ with respect to horizontal transfer in angiosperm mitochondria.
publishDate 2008
dc.date.none.fl_str_mv 2008-06
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/11336/157717
Sánchez Puerta, María Virginia; Cho, Yangrae; Mower, Jeffrey P.; Alverson, Andrew J.; Palmer, Jeffrey D.; Frequent, phylogenetically local horizontal transfer of the cox1 group I intron in flowering plant mitochondria; Oxford University Press; Molecular Biology and Evolution; 25; 8; 6-2008; 1762-1777
0737-4038
CONICET Digital
CONICET
url http://hdl.handle.net/11336/157717
identifier_str_mv Sánchez Puerta, María Virginia; Cho, Yangrae; Mower, Jeffrey P.; Alverson, Andrew J.; Palmer, Jeffrey D.; Frequent, phylogenetically local horizontal transfer of the cox1 group I intron in flowering plant mitochondria; Oxford University Press; Molecular Biology and Evolution; 25; 8; 6-2008; 1762-1777
0737-4038
CONICET Digital
CONICET
dc.language.none.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv info:eu-repo/semantics/altIdentifier/doi/10.1093/molbev/msn129
info:eu-repo/semantics/altIdentifier/url/https://academic.oup.com/mbe/article/25/8/1762/1116655
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
eu_rights_str_mv openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
dc.format.none.fl_str_mv application/pdf
application/pdf
dc.publisher.none.fl_str_mv Oxford University Press
publisher.none.fl_str_mv Oxford University Press
dc.source.none.fl_str_mv reponame:CONICET Digital (CONICET)
instname:Consejo Nacional de Investigaciones Científicas y Técnicas
reponame_str CONICET Digital (CONICET)
collection CONICET Digital (CONICET)
instname_str Consejo Nacional de Investigaciones Científicas y Técnicas
repository.name.fl_str_mv CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas
repository.mail.fl_str_mv dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar
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