A Network of Hydrophobic Residues Impeding Helix αC Rotation Maintains Latency of Kinase Gcn2, Which Phosphorylates the α Subunit of Translation Initiation Factor 2

Autores
Gárriz, Andrés; Qiu, Hongfang; Dey, Madhusudan; Seo, Eun Joo; Dever, Thomas E.; Hinnebusch, Alan G.
Año de publicación
2009
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
Kinase Gcn2 is activated by amino acid starvation and down-regulates translation initiation by phosphorylating eIF2á. The Gcn2 kinase domain (KD) is inert and must be activated by tRNA binding to the adjacent regulatory domain. Previous work indicated that yeast Gcn2 latency results from inflexibility of the hinge connecting N- and C-lobes and a partially obstructed ATP-binding site. Here we provide strong evidence that a network of hydrophobic interactions centered on Leu-856 also promotes latency by constraining helix áC rotation, in a manner relieved during amino acid starvation by tRNA binding and autophosphorylation of Thr-882 in the activation loop. Thus, we show that mutationally disrupting the hydrophobic network in various ways constitutively activates eIF2á phosphorylation in vivo and bypasses the requirement for a key tRNA binding motif (m2) and Thr-882 in Gcn2. In particular,  replacing Leu-856 with any non-hydrophobic residue activates Gcn2, while substitutions with various hydrophobic residues maintain kinase latency. We further provide strong evidence that parallel, back-to back dimerization of the KD is a step on the Gcn2 activation pathway promoted by tRNA binding and  autophosphorylation. Remarkably, mutations that disrupt the L856-hydrophobic network or enhance  hinge flexibility eliminate the need for the conserved salt-bridge at the parallel dimer interface, implying  that KD dimerization facilitates reorientation of áC and remodeling of the active site for enhanced ATP  binding and catalysis. We propose that hinge remodeling, parallel dimerization, and reorientation of áC  are mutually reinforcing conformational transitions stimulated by tRNA binding and secured by the  ensuing autophosphorylation of T882 for stable kinase activation.
Fil: Gárriz, Andrés. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - La Plata. Instituto de Investigaciones Biotecnológicas. Instituto de Investigaciones Biotecnológicas "Dr. Raúl Alfonsín" (sede Chascomús). Universidad Nacional de San Martín. Instituto de Investigaciones Biotecnológicas. Instituto de Investigaciones Biotecnológicas "Dr. Raúl Alfonsín" (sede Chascomús); Argentina
Fil: Qiu, Hongfang. National Institute of Child Health and Human Development; Estados Unidos
Fil: Dey, Madhusudan. National Institute of Child Health and Human Development; Estados Unidos
Fil: Seo, Eun Joo. National Institute of Child Health and Human Development; Estados Unidos
Fil: Dever, Thomas E.. National Institute of Child Health and Human Development; Estados Unidos
Fil: Hinnebusch, Alan G.. National Institute of Child Health and Human Development; Estados Unidos
Materia
GCN2
kinase
translation initiation
Nivel de accesibilidad
acceso abierto
Condiciones de uso
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
Repositorio
CONICET Digital (CONICET)
Institución
Consejo Nacional de Investigaciones Científicas y Técnicas
OAI Identificador
oai:ri.conicet.gov.ar:11336/241802

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network_name_str CONICET Digital (CONICET)
spelling A Network of Hydrophobic Residues Impeding Helix αC Rotation Maintains Latency of Kinase Gcn2, Which Phosphorylates the α Subunit of Translation Initiation Factor 2Gárriz, AndrésQiu, HongfangDey, MadhusudanSeo, Eun JooDever, Thomas E.Hinnebusch, Alan G.GCN2kinasetranslation initiationhttps://purl.org/becyt/ford/1.6https://purl.org/becyt/ford/1Kinase Gcn2 is activated by amino acid starvation and down-regulates translation initiation by phosphorylating eIF2á. The Gcn2 kinase domain (KD) is inert and must be activated by tRNA binding to the adjacent regulatory domain. Previous work indicated that yeast Gcn2 latency results from inflexibility of the hinge connecting N- and C-lobes and a partially obstructed ATP-binding site. Here we provide strong evidence that a network of hydrophobic interactions centered on Leu-856 also promotes latency by constraining helix áC rotation, in a manner relieved during amino acid starvation by tRNA binding and autophosphorylation of Thr-882 in the activation loop. Thus, we show that mutationally disrupting the hydrophobic network in various ways constitutively activates eIF2á phosphorylation in vivo and bypasses the requirement for a key tRNA binding motif (m2) and Thr-882 in Gcn2. In particular,  replacing Leu-856 with any non-hydrophobic residue activates Gcn2, while substitutions with various hydrophobic residues maintain kinase latency. We further provide strong evidence that parallel, back-to back dimerization of the KD is a step on the Gcn2 activation pathway promoted by tRNA binding and  autophosphorylation. Remarkably, mutations that disrupt the L856-hydrophobic network or enhance  hinge flexibility eliminate the need for the conserved salt-bridge at the parallel dimer interface, implying  that KD dimerization facilitates reorientation of áC and remodeling of the active site for enhanced ATP  binding and catalysis. We propose that hinge remodeling, parallel dimerization, and reorientation of áC  are mutually reinforcing conformational transitions stimulated by tRNA binding and secured by the  ensuing autophosphorylation of T882 for stable kinase activation.Fil: Gárriz, Andrés. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - La Plata. Instituto de Investigaciones Biotecnológicas. Instituto de Investigaciones Biotecnológicas "Dr. Raúl Alfonsín" (sede Chascomús). Universidad Nacional de San Martín. Instituto de Investigaciones Biotecnológicas. Instituto de Investigaciones Biotecnológicas "Dr. Raúl Alfonsín" (sede Chascomús); ArgentinaFil: Qiu, Hongfang. National Institute of Child Health and Human Development; Estados UnidosFil: Dey, Madhusudan. National Institute of Child Health and Human Development; Estados UnidosFil: Seo, Eun Joo. National Institute of Child Health and Human Development; Estados UnidosFil: Dever, Thomas E.. National Institute of Child Health and Human Development; Estados UnidosFil: Hinnebusch, Alan G.. National Institute of Child Health and Human Development; Estados UnidosAmerican Society for Microbiology2009-03info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/241802Gárriz, Andrés; Qiu, Hongfang; Dey, Madhusudan; Seo, Eun Joo; Dever, Thomas E.; et al.; A Network of Hydrophobic Residues Impeding Helix αC Rotation Maintains Latency of Kinase Gcn2, Which Phosphorylates the α Subunit of Translation Initiation Factor 2; American Society for Microbiology; Molecular and Cellular Biology; 29; 6; 3-2009; 1592-16070270-73061098-5549CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/url/https://www.tandfonline.com/doi/full/10.1128/MCB.01446-08info:eu-repo/semantics/altIdentifier/doi/10.1128/MCB.01446-08info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-sa/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-09-29T09:42:27Zoai:ri.conicet.gov.ar:11336/241802instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-09-29 09:42:27.929CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse
dc.title.none.fl_str_mv A Network of Hydrophobic Residues Impeding Helix αC Rotation Maintains Latency of Kinase Gcn2, Which Phosphorylates the α Subunit of Translation Initiation Factor 2
title A Network of Hydrophobic Residues Impeding Helix αC Rotation Maintains Latency of Kinase Gcn2, Which Phosphorylates the α Subunit of Translation Initiation Factor 2
spellingShingle A Network of Hydrophobic Residues Impeding Helix αC Rotation Maintains Latency of Kinase Gcn2, Which Phosphorylates the α Subunit of Translation Initiation Factor 2
Gárriz, Andrés
GCN2
kinase
translation initiation
title_short A Network of Hydrophobic Residues Impeding Helix αC Rotation Maintains Latency of Kinase Gcn2, Which Phosphorylates the α Subunit of Translation Initiation Factor 2
title_full A Network of Hydrophobic Residues Impeding Helix αC Rotation Maintains Latency of Kinase Gcn2, Which Phosphorylates the α Subunit of Translation Initiation Factor 2
title_fullStr A Network of Hydrophobic Residues Impeding Helix αC Rotation Maintains Latency of Kinase Gcn2, Which Phosphorylates the α Subunit of Translation Initiation Factor 2
title_full_unstemmed A Network of Hydrophobic Residues Impeding Helix αC Rotation Maintains Latency of Kinase Gcn2, Which Phosphorylates the α Subunit of Translation Initiation Factor 2
title_sort A Network of Hydrophobic Residues Impeding Helix αC Rotation Maintains Latency of Kinase Gcn2, Which Phosphorylates the α Subunit of Translation Initiation Factor 2
dc.creator.none.fl_str_mv Gárriz, Andrés
Qiu, Hongfang
Dey, Madhusudan
Seo, Eun Joo
Dever, Thomas E.
Hinnebusch, Alan G.
author Gárriz, Andrés
author_facet Gárriz, Andrés
Qiu, Hongfang
Dey, Madhusudan
Seo, Eun Joo
Dever, Thomas E.
Hinnebusch, Alan G.
author_role author
author2 Qiu, Hongfang
Dey, Madhusudan
Seo, Eun Joo
Dever, Thomas E.
Hinnebusch, Alan G.
author2_role author
author
author
author
author
dc.subject.none.fl_str_mv GCN2
kinase
translation initiation
topic GCN2
kinase
translation initiation
purl_subject.fl_str_mv https://purl.org/becyt/ford/1.6
https://purl.org/becyt/ford/1
dc.description.none.fl_txt_mv Kinase Gcn2 is activated by amino acid starvation and down-regulates translation initiation by phosphorylating eIF2á. The Gcn2 kinase domain (KD) is inert and must be activated by tRNA binding to the adjacent regulatory domain. Previous work indicated that yeast Gcn2 latency results from inflexibility of the hinge connecting N- and C-lobes and a partially obstructed ATP-binding site. Here we provide strong evidence that a network of hydrophobic interactions centered on Leu-856 also promotes latency by constraining helix áC rotation, in a manner relieved during amino acid starvation by tRNA binding and autophosphorylation of Thr-882 in the activation loop. Thus, we show that mutationally disrupting the hydrophobic network in various ways constitutively activates eIF2á phosphorylation in vivo and bypasses the requirement for a key tRNA binding motif (m2) and Thr-882 in Gcn2. In particular,  replacing Leu-856 with any non-hydrophobic residue activates Gcn2, while substitutions with various hydrophobic residues maintain kinase latency. We further provide strong evidence that parallel, back-to back dimerization of the KD is a step on the Gcn2 activation pathway promoted by tRNA binding and  autophosphorylation. Remarkably, mutations that disrupt the L856-hydrophobic network or enhance  hinge flexibility eliminate the need for the conserved salt-bridge at the parallel dimer interface, implying  that KD dimerization facilitates reorientation of áC and remodeling of the active site for enhanced ATP  binding and catalysis. We propose that hinge remodeling, parallel dimerization, and reorientation of áC  are mutually reinforcing conformational transitions stimulated by tRNA binding and secured by the  ensuing autophosphorylation of T882 for stable kinase activation.
Fil: Gárriz, Andrés. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - La Plata. Instituto de Investigaciones Biotecnológicas. Instituto de Investigaciones Biotecnológicas "Dr. Raúl Alfonsín" (sede Chascomús). Universidad Nacional de San Martín. Instituto de Investigaciones Biotecnológicas. Instituto de Investigaciones Biotecnológicas "Dr. Raúl Alfonsín" (sede Chascomús); Argentina
Fil: Qiu, Hongfang. National Institute of Child Health and Human Development; Estados Unidos
Fil: Dey, Madhusudan. National Institute of Child Health and Human Development; Estados Unidos
Fil: Seo, Eun Joo. National Institute of Child Health and Human Development; Estados Unidos
Fil: Dever, Thomas E.. National Institute of Child Health and Human Development; Estados Unidos
Fil: Hinnebusch, Alan G.. National Institute of Child Health and Human Development; Estados Unidos
description Kinase Gcn2 is activated by amino acid starvation and down-regulates translation initiation by phosphorylating eIF2á. The Gcn2 kinase domain (KD) is inert and must be activated by tRNA binding to the adjacent regulatory domain. Previous work indicated that yeast Gcn2 latency results from inflexibility of the hinge connecting N- and C-lobes and a partially obstructed ATP-binding site. Here we provide strong evidence that a network of hydrophobic interactions centered on Leu-856 also promotes latency by constraining helix áC rotation, in a manner relieved during amino acid starvation by tRNA binding and autophosphorylation of Thr-882 in the activation loop. Thus, we show that mutationally disrupting the hydrophobic network in various ways constitutively activates eIF2á phosphorylation in vivo and bypasses the requirement for a key tRNA binding motif (m2) and Thr-882 in Gcn2. In particular,  replacing Leu-856 with any non-hydrophobic residue activates Gcn2, while substitutions with various hydrophobic residues maintain kinase latency. We further provide strong evidence that parallel, back-to back dimerization of the KD is a step on the Gcn2 activation pathway promoted by tRNA binding and  autophosphorylation. Remarkably, mutations that disrupt the L856-hydrophobic network or enhance  hinge flexibility eliminate the need for the conserved salt-bridge at the parallel dimer interface, implying  that KD dimerization facilitates reorientation of áC and remodeling of the active site for enhanced ATP  binding and catalysis. We propose that hinge remodeling, parallel dimerization, and reorientation of áC  are mutually reinforcing conformational transitions stimulated by tRNA binding and secured by the  ensuing autophosphorylation of T882 for stable kinase activation.
publishDate 2009
dc.date.none.fl_str_mv 2009-03
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/11336/241802
Gárriz, Andrés; Qiu, Hongfang; Dey, Madhusudan; Seo, Eun Joo; Dever, Thomas E.; et al.; A Network of Hydrophobic Residues Impeding Helix αC Rotation Maintains Latency of Kinase Gcn2, Which Phosphorylates the α Subunit of Translation Initiation Factor 2; American Society for Microbiology; Molecular and Cellular Biology; 29; 6; 3-2009; 1592-1607
0270-7306
1098-5549
CONICET Digital
CONICET
url http://hdl.handle.net/11336/241802
identifier_str_mv Gárriz, Andrés; Qiu, Hongfang; Dey, Madhusudan; Seo, Eun Joo; Dever, Thomas E.; et al.; A Network of Hydrophobic Residues Impeding Helix αC Rotation Maintains Latency of Kinase Gcn2, Which Phosphorylates the α Subunit of Translation Initiation Factor 2; American Society for Microbiology; Molecular and Cellular Biology; 29; 6; 3-2009; 1592-1607
0270-7306
1098-5549
CONICET Digital
CONICET
dc.language.none.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv info:eu-repo/semantics/altIdentifier/url/https://www.tandfonline.com/doi/full/10.1128/MCB.01446-08
info:eu-repo/semantics/altIdentifier/doi/10.1128/MCB.01446-08
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
eu_rights_str_mv openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
dc.format.none.fl_str_mv application/pdf
application/pdf
dc.publisher.none.fl_str_mv American Society for Microbiology
publisher.none.fl_str_mv American Society for Microbiology
dc.source.none.fl_str_mv reponame:CONICET Digital (CONICET)
instname:Consejo Nacional de Investigaciones Científicas y Técnicas
reponame_str CONICET Digital (CONICET)
collection CONICET Digital (CONICET)
instname_str Consejo Nacional de Investigaciones Científicas y Técnicas
repository.name.fl_str_mv CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas
repository.mail.fl_str_mv dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar
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