Catalytic Activity of Human Placental Alkaline Phosphatase (PLAP):Insights from a Computational Study

Autores
Borosky, Gabriela Leonor
Año de publicación
2014
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
Alkaline phosphatases (APs) catalyze the hydrolysis and transphosphorylation of phosphate monoesters. Quantum-mechanical computational methods were employed to study the catalytic mechanism of human placental AP (PLAP). An active-site model was used, constructed on the basis of the X-ray crystal structure of the enzyme. Kinetic and thermodynamic evaluations were achieved foreach reaction step. Calculations shed light on the mechanistic differences that had been experimentally observed between aryl and alkyl phosphates, particularly regarding the rate-determining step. The functional implications of relevant residues in the active site were examined. The present theoretical study rationalizes experimental observations previously reported in the literature.
Fil: Borosky, Gabriela Leonor. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Instituto de Investigaciones en Físico-química de Córdoba. Universidad Nacional de Córdoba. Facultad de Ciencias Químicas. Instituto de Investigaciones en Físico-química de Córdoba; Argentina
Materia
Computational Chemistry
Enzymatic Catalysis
Density Functional Theory
Metalloproteins
Nivel de accesibilidad
acceso abierto
Condiciones de uso
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
Repositorio
CONICET Digital (CONICET)
Institución
Consejo Nacional de Investigaciones Científicas y Técnicas
OAI Identificador
oai:ri.conicet.gov.ar:11336/31360

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network_name_str CONICET Digital (CONICET)
spelling Catalytic Activity of Human Placental Alkaline Phosphatase (PLAP):Insights from a Computational StudyBorosky, Gabriela LeonorComputational ChemistryEnzymatic CatalysisDensity Functional TheoryMetalloproteinshttps://purl.org/becyt/ford/1.4https://purl.org/becyt/ford/1Alkaline phosphatases (APs) catalyze the hydrolysis and transphosphorylation of phosphate monoesters. Quantum-mechanical computational methods were employed to study the catalytic mechanism of human placental AP (PLAP). An active-site model was used, constructed on the basis of the X-ray crystal structure of the enzyme. Kinetic and thermodynamic evaluations were achieved foreach reaction step. Calculations shed light on the mechanistic differences that had been experimentally observed between aryl and alkyl phosphates, particularly regarding the rate-determining step. The functional implications of relevant residues in the active site were examined. The present theoretical study rationalizes experimental observations previously reported in the literature.Fil: Borosky, Gabriela Leonor. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Instituto de Investigaciones en Físico-química de Córdoba. Universidad Nacional de Córdoba. Facultad de Ciencias Químicas. Instituto de Investigaciones en Físico-química de Córdoba; ArgentinaAmerican Chemical Society2014-11info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/31360Catalytic Activity of Human Placental Alkaline Phosphatase (PLAP):Insights from a Computational Study; American Chemical Society; Journal of Physical Chemistry B; 118; 49; 11-2014; 14302-143131089-56471520-5207CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/doi/10.1021/jp511221cinfo:eu-repo/semantics/altIdentifier/url/http://pubs.acs.org/doi/10.1021/jp511221cinfo:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-sa/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-09-10T13:17:11Zoai:ri.conicet.gov.ar:11336/31360instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-09-10 13:17:11.932CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse
dc.title.none.fl_str_mv Catalytic Activity of Human Placental Alkaline Phosphatase (PLAP):Insights from a Computational Study
title Catalytic Activity of Human Placental Alkaline Phosphatase (PLAP):Insights from a Computational Study
spellingShingle Catalytic Activity of Human Placental Alkaline Phosphatase (PLAP):Insights from a Computational Study
Borosky, Gabriela Leonor
Computational Chemistry
Enzymatic Catalysis
Density Functional Theory
Metalloproteins
title_short Catalytic Activity of Human Placental Alkaline Phosphatase (PLAP):Insights from a Computational Study
title_full Catalytic Activity of Human Placental Alkaline Phosphatase (PLAP):Insights from a Computational Study
title_fullStr Catalytic Activity of Human Placental Alkaline Phosphatase (PLAP):Insights from a Computational Study
title_full_unstemmed Catalytic Activity of Human Placental Alkaline Phosphatase (PLAP):Insights from a Computational Study
title_sort Catalytic Activity of Human Placental Alkaline Phosphatase (PLAP):Insights from a Computational Study
dc.creator.none.fl_str_mv Borosky, Gabriela Leonor
author Borosky, Gabriela Leonor
author_facet Borosky, Gabriela Leonor
author_role author
dc.subject.none.fl_str_mv Computational Chemistry
Enzymatic Catalysis
Density Functional Theory
Metalloproteins
topic Computational Chemistry
Enzymatic Catalysis
Density Functional Theory
Metalloproteins
purl_subject.fl_str_mv https://purl.org/becyt/ford/1.4
https://purl.org/becyt/ford/1
dc.description.none.fl_txt_mv Alkaline phosphatases (APs) catalyze the hydrolysis and transphosphorylation of phosphate monoesters. Quantum-mechanical computational methods were employed to study the catalytic mechanism of human placental AP (PLAP). An active-site model was used, constructed on the basis of the X-ray crystal structure of the enzyme. Kinetic and thermodynamic evaluations were achieved foreach reaction step. Calculations shed light on the mechanistic differences that had been experimentally observed between aryl and alkyl phosphates, particularly regarding the rate-determining step. The functional implications of relevant residues in the active site were examined. The present theoretical study rationalizes experimental observations previously reported in the literature.
Fil: Borosky, Gabriela Leonor. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Instituto de Investigaciones en Físico-química de Córdoba. Universidad Nacional de Córdoba. Facultad de Ciencias Químicas. Instituto de Investigaciones en Físico-química de Córdoba; Argentina
description Alkaline phosphatases (APs) catalyze the hydrolysis and transphosphorylation of phosphate monoesters. Quantum-mechanical computational methods were employed to study the catalytic mechanism of human placental AP (PLAP). An active-site model was used, constructed on the basis of the X-ray crystal structure of the enzyme. Kinetic and thermodynamic evaluations were achieved foreach reaction step. Calculations shed light on the mechanistic differences that had been experimentally observed between aryl and alkyl phosphates, particularly regarding the rate-determining step. The functional implications of relevant residues in the active site were examined. The present theoretical study rationalizes experimental observations previously reported in the literature.
publishDate 2014
dc.date.none.fl_str_mv 2014-11
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/11336/31360
Catalytic Activity of Human Placental Alkaline Phosphatase (PLAP):Insights from a Computational Study; American Chemical Society; Journal of Physical Chemistry B; 118; 49; 11-2014; 14302-14313
1089-5647
1520-5207
CONICET Digital
CONICET
url http://hdl.handle.net/11336/31360
identifier_str_mv Catalytic Activity of Human Placental Alkaline Phosphatase (PLAP):Insights from a Computational Study; American Chemical Society; Journal of Physical Chemistry B; 118; 49; 11-2014; 14302-14313
1089-5647
1520-5207
CONICET Digital
CONICET
dc.language.none.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv info:eu-repo/semantics/altIdentifier/doi/10.1021/jp511221c
info:eu-repo/semantics/altIdentifier/url/http://pubs.acs.org/doi/10.1021/jp511221c
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
eu_rights_str_mv openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
dc.format.none.fl_str_mv application/pdf
application/pdf
dc.publisher.none.fl_str_mv American Chemical Society
publisher.none.fl_str_mv American Chemical Society
dc.source.none.fl_str_mv reponame:CONICET Digital (CONICET)
instname:Consejo Nacional de Investigaciones Científicas y Técnicas
reponame_str CONICET Digital (CONICET)
collection CONICET Digital (CONICET)
instname_str Consejo Nacional de Investigaciones Científicas y Técnicas
repository.name.fl_str_mv CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas
repository.mail.fl_str_mv dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar
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score 12.993085