Global population divergence and admixture of the brown rat (Rattus norvegicus)

Autores: Puckett, Emily E.; Park, Jane; Combs, Matthew; Blum, Michael J.; Bryant, Juliet E.; Caccone, Adalgisa; Costa, Federico; Deinum, Eva E.; Esther, Alexandra; Himsworth, Chelsea G.; Keightley, Peter D.; Ko, Albert; Lundkvist, Åke; McElhinney, Lorraine M.; Morand, Serge; Robins, Judith; Russell, James; Strand, Tanja M.; Suarez, Olga Virginia; Yon, Lisa; Munshi South, Jason
Año de publicación: 2016
Idioma: inglés
Tipo de recurso: artículo
Estado: versión publicada
Descripción: Native to China and Mongolia, the brown rat (Rattus norvegicus) now enjoys a worldwide distribution. While black rats and the house mouse tracked the regional development of human agricultural settlements, brown rats did not appear in Europe until the 1500s, suggesting their range expansion was a response to relatively recent increases in global trade. We inferred the global phylogeography of brown rats using 32 k SNPs, and detected 13 evolutionary clusters within five expansion routes. One cluster arose following a southward expansion into Southeast Asia. Three additional clusters arose from two independent eastward expansions: one expansion from Russia to the Aleutian Archipelago, and a second to western North America. Westward expansion resulted in the colonization of Europe from which subsequent rapid colonization of Africa, the Americas and Australasia occurred, and multiple evolutionary clusters were detected. An astonishing degree of fine-grained clustering between and within sampling sites underscored the extent to which urban heterogeneity shaped genetic structure of commensal rodents. Surprisingly, few individuals were recent migrants, suggesting that recruitment into established populations is limited. Understanding the global population structure of R. norvegicus offers novel perspectives on the forces driving the spread of zoonotic disease, and aids in development of rat eradication programmes.
Fil: Puckett, Emily E.. Fordham University; Estados Unidos
Fil: Park, Jane. Fordham University; Estados Unidos
Fil: Combs, Matthew. Fordham University; Estados Unidos
Fil: Blum, Michael J.. University of Tulane; Estados Unidos
Fil: Bryant, Juliet E.. Oxford University; Vietnam
Fil: Caccone, Adalgisa. University of Yale; Estados Unidos
Fil: Costa, Federico. Universidade Federal da Bahia; Brasil
Fil: Deinum, Eva E.. University of Edinburgh; Reino Unido. Wageningen University; Países Bajos
Fil: Esther, Alexandra. Julius Kühn Institute; Alemania
Fil: Himsworth, Chelsea G.. British Columbia Ministry of Agriculture; Canadá
Fil: Keightley, Peter D.. University of Edinburgh; Reino Unido
Fil: Ko, Albert. University of Yale; Estados Unidos
Fil: Lundkvist, Åke. Uppsala University; Suecia
Fil: McElhinney, Lorraine M.. Animal and Plant Health Agency; Reino Unido
Fil: Morand, Serge. Centre d’Infectiologie Christophe Mérieux du Laos; Laos
Fil: Robins, Judith. University of Auckland; Nueva Zelanda
Fil: Russell, James. University of Auckland; Nueva Zelanda
Fil: Strand, Tanja M.. Uppsala University; Suecia
Fil: Suarez, Olga Virginia. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Ecología, Genética y Evolución de Buenos Aires. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Ecología, Genética y Evolución de Buenos Aires; Argentina
Fil: Yon, Lisa. University of Nottingham; Reino Unido
Fil: Munshi South, Jason. Fordham University; Estados Unidos
Materia: CITYSCAPES
COMMENSAL
INVASIVE SPECIES
PHYLOGEOGRAPHY
POPULATION GENOMICS
RAD-SEQ
Nivel de accesibilidad: acceso abierto
Condiciones de uso: https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
Repositorio
Institución: Consejo Nacional de Investigaciones Científicas y Técnicas
OAI Identificador: oai:ri.conicet.gov.ar:11336/86051

Acceder

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spelling	Global population divergence and admixture of the brown rat (Rattus norvegicus)Puckett, Emily E.Park, JaneCombs, MatthewBlum, Michael J.Bryant, Juliet E.Caccone, AdalgisaCosta, FedericoDeinum, Eva E.Esther, AlexandraHimsworth, Chelsea G.Keightley, Peter D.Ko, AlbertLundkvist, ÅkeMcElhinney, Lorraine M.Morand, SergeRobins, JudithRussell, JamesStrand, Tanja M.Suarez, Olga VirginiaYon, LisaMunshi South, JasonCITYSCAPESCOMMENSALINVASIVE SPECIESPHYLOGEOGRAPHYPOPULATION GENOMICSRAD-SEQhttps://purl.org/becyt/ford/1.6https://purl.org/becyt/ford/1Native to China and Mongolia, the brown rat (Rattus norvegicus) now enjoys a worldwide distribution. While black rats and the house mouse tracked the regional development of human agricultural settlements, brown rats did not appear in Europe until the 1500s, suggesting their range expansion was a response to relatively recent increases in global trade. We inferred the global phylogeography of brown rats using 32 k SNPs, and detected 13 evolutionary clusters within five expansion routes. One cluster arose following a southward expansion into Southeast Asia. Three additional clusters arose from two independent eastward expansions: one expansion from Russia to the Aleutian Archipelago, and a second to western North America. Westward expansion resulted in the colonization of Europe from which subsequent rapid colonization of Africa, the Americas and Australasia occurred, and multiple evolutionary clusters were detected. An astonishing degree of fine-grained clustering between and within sampling sites underscored the extent to which urban heterogeneity shaped genetic structure of commensal rodents. Surprisingly, few individuals were recent migrants, suggesting that recruitment into established populations is limited. Understanding the global population structure of R. norvegicus offers novel perspectives on the forces driving the spread of zoonotic disease, and aids in development of rat eradication programmes.Fil: Puckett, Emily E.. Fordham University; Estados UnidosFil: Park, Jane. Fordham University; Estados UnidosFil: Combs, Matthew. Fordham University; Estados UnidosFil: Blum, Michael J.. University of Tulane; Estados UnidosFil: Bryant, Juliet E.. Oxford University; VietnamFil: Caccone, Adalgisa. University of Yale; Estados UnidosFil: Costa, Federico. Universidade Federal da Bahia; BrasilFil: Deinum, Eva E.. University of Edinburgh; Reino Unido. Wageningen University; Países BajosFil: Esther, Alexandra. Julius Kühn Institute; AlemaniaFil: Himsworth, Chelsea G.. British Columbia Ministry of Agriculture; CanadáFil: Keightley, Peter D.. University of Edinburgh; Reino UnidoFil: Ko, Albert. University of Yale; Estados UnidosFil: Lundkvist, Åke. Uppsala University; SueciaFil: McElhinney, Lorraine M.. Animal and Plant Health Agency; Reino UnidoFil: Morand, Serge. Centre d’Infectiologie Christophe Mérieux du Laos; LaosFil: Robins, Judith. University of Auckland; Nueva ZelandaFil: Russell, James. University of Auckland; Nueva ZelandaFil: Strand, Tanja M.. Uppsala University; SueciaFil: Suarez, Olga Virginia. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Ecología, Genética y Evolución de Buenos Aires. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Ecología, Genética y Evolución de Buenos Aires; ArgentinaFil: Yon, Lisa. University of Nottingham; Reino UnidoFil: Munshi South, Jason. Fordham University; Estados UnidosThe Royal Society2016-10info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/86051Puckett, Emily E.; Park, Jane; Combs, Matthew; Blum, Michael J.; Bryant, Juliet E.; et al.; Global population divergence and admixture of the brown rat (Rattus norvegicus); The Royal Society; Proceedings of the Royal Society of London. Series B: Biological Sciences; 283; 1841; 10-2016; 1-90962-8452CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/doi/10.1098/rspb.2016.1762info:eu-repo/semantics/altIdentifier/url/https://royalsocietypublishing.org/doi/10.1098/rspb.2016.1762info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-sa/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-10-22T11:19:51Zoai:ri.conicet.gov.ar:11336/86051instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-10-22 11:19:51.51CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse
dc.title.none.fl_str_mv	Global population divergence and admixture of the brown rat (Rattus norvegicus)
title	Global population divergence and admixture of the brown rat (Rattus norvegicus)
spellingShingle	Global population divergence and admixture of the brown rat (Rattus norvegicus) Puckett, Emily E. CITYSCAPES COMMENSAL INVASIVE SPECIES PHYLOGEOGRAPHY POPULATION GENOMICS RAD-SEQ
title_short	Global population divergence and admixture of the brown rat (Rattus norvegicus)
title_full	Global population divergence and admixture of the brown rat (Rattus norvegicus)
title_fullStr	Global population divergence and admixture of the brown rat (Rattus norvegicus)
title_full_unstemmed	Global population divergence and admixture of the brown rat (Rattus norvegicus)
title_sort	Global population divergence and admixture of the brown rat (Rattus norvegicus)
dc.creator.none.fl_str_mv	Puckett, Emily E. Park, Jane Combs, Matthew Blum, Michael J. Bryant, Juliet E. Caccone, Adalgisa Costa, Federico Deinum, Eva E. Esther, Alexandra Himsworth, Chelsea G. Keightley, Peter D. Ko, Albert Lundkvist, Åke McElhinney, Lorraine M. Morand, Serge Robins, Judith Russell, James Strand, Tanja M. Suarez, Olga Virginia Yon, Lisa Munshi South, Jason
author	Puckett, Emily E.
author_facet	Puckett, Emily E. Park, Jane Combs, Matthew Blum, Michael J. Bryant, Juliet E. Caccone, Adalgisa Costa, Federico Deinum, Eva E. Esther, Alexandra Himsworth, Chelsea G. Keightley, Peter D. Ko, Albert Lundkvist, Åke McElhinney, Lorraine M. Morand, Serge Robins, Judith Russell, James Strand, Tanja M. Suarez, Olga Virginia Yon, Lisa Munshi South, Jason
author_role	author
author2	Park, Jane Combs, Matthew Blum, Michael J. Bryant, Juliet E. Caccone, Adalgisa Costa, Federico Deinum, Eva E. Esther, Alexandra Himsworth, Chelsea G. Keightley, Peter D. Ko, Albert Lundkvist, Åke McElhinney, Lorraine M. Morand, Serge Robins, Judith Russell, James Strand, Tanja M. Suarez, Olga Virginia Yon, Lisa Munshi South, Jason
author2_role	author author author author author author author author author author author author author author author author author author author author
dc.subject.none.fl_str_mv	CITYSCAPES COMMENSAL INVASIVE SPECIES PHYLOGEOGRAPHY POPULATION GENOMICS RAD-SEQ
topic	CITYSCAPES COMMENSAL INVASIVE SPECIES PHYLOGEOGRAPHY POPULATION GENOMICS RAD-SEQ
purl_subject.fl_str_mv	https://purl.org/becyt/ford/1.6 https://purl.org/becyt/ford/1
dc.description.none.fl_txt_mv	Native to China and Mongolia, the brown rat (Rattus norvegicus) now enjoys a worldwide distribution. While black rats and the house mouse tracked the regional development of human agricultural settlements, brown rats did not appear in Europe until the 1500s, suggesting their range expansion was a response to relatively recent increases in global trade. We inferred the global phylogeography of brown rats using 32 k SNPs, and detected 13 evolutionary clusters within five expansion routes. One cluster arose following a southward expansion into Southeast Asia. Three additional clusters arose from two independent eastward expansions: one expansion from Russia to the Aleutian Archipelago, and a second to western North America. Westward expansion resulted in the colonization of Europe from which subsequent rapid colonization of Africa, the Americas and Australasia occurred, and multiple evolutionary clusters were detected. An astonishing degree of fine-grained clustering between and within sampling sites underscored the extent to which urban heterogeneity shaped genetic structure of commensal rodents. Surprisingly, few individuals were recent migrants, suggesting that recruitment into established populations is limited. Understanding the global population structure of R. norvegicus offers novel perspectives on the forces driving the spread of zoonotic disease, and aids in development of rat eradication programmes. Fil: Puckett, Emily E.. Fordham University; Estados Unidos Fil: Park, Jane. Fordham University; Estados Unidos Fil: Combs, Matthew. Fordham University; Estados Unidos Fil: Blum, Michael J.. University of Tulane; Estados Unidos Fil: Bryant, Juliet E.. Oxford University; Vietnam Fil: Caccone, Adalgisa. University of Yale; Estados Unidos Fil: Costa, Federico. Universidade Federal da Bahia; Brasil Fil: Deinum, Eva E.. University of Edinburgh; Reino Unido. Wageningen University; Países Bajos Fil: Esther, Alexandra. Julius Kühn Institute; Alemania Fil: Himsworth, Chelsea G.. British Columbia Ministry of Agriculture; Canadá Fil: Keightley, Peter D.. University of Edinburgh; Reino Unido Fil: Ko, Albert. University of Yale; Estados Unidos Fil: Lundkvist, Åke. Uppsala University; Suecia Fil: McElhinney, Lorraine M.. Animal and Plant Health Agency; Reino Unido Fil: Morand, Serge. Centre d’Infectiologie Christophe Mérieux du Laos; Laos Fil: Robins, Judith. University of Auckland; Nueva Zelanda Fil: Russell, James. University of Auckland; Nueva Zelanda Fil: Strand, Tanja M.. Uppsala University; Suecia Fil: Suarez, Olga Virginia. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Ecología, Genética y Evolución de Buenos Aires. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Ecología, Genética y Evolución de Buenos Aires; Argentina Fil: Yon, Lisa. University of Nottingham; Reino Unido Fil: Munshi South, Jason. Fordham University; Estados Unidos
description	Native to China and Mongolia, the brown rat (Rattus norvegicus) now enjoys a worldwide distribution. While black rats and the house mouse tracked the regional development of human agricultural settlements, brown rats did not appear in Europe until the 1500s, suggesting their range expansion was a response to relatively recent increases in global trade. We inferred the global phylogeography of brown rats using 32 k SNPs, and detected 13 evolutionary clusters within five expansion routes. One cluster arose following a southward expansion into Southeast Asia. Three additional clusters arose from two independent eastward expansions: one expansion from Russia to the Aleutian Archipelago, and a second to western North America. Westward expansion resulted in the colonization of Europe from which subsequent rapid colonization of Africa, the Americas and Australasia occurred, and multiple evolutionary clusters were detected. An astonishing degree of fine-grained clustering between and within sampling sites underscored the extent to which urban heterogeneity shaped genetic structure of commensal rodents. Surprisingly, few individuals were recent migrants, suggesting that recruitment into established populations is limited. Understanding the global population structure of R. norvegicus offers novel perspectives on the forces driving the spread of zoonotic disease, and aids in development of rat eradication programmes.
publishDate	2016
dc.date.none.fl_str_mv	2016-10
dc.type.none.fl_str_mv	info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion http://purl.org/coar/resource_type/c_6501 info:ar-repo/semantics/articulo
format	article
status_str	publishedVersion
dc.identifier.none.fl_str_mv	http://hdl.handle.net/11336/86051 Puckett, Emily E.; Park, Jane; Combs, Matthew; Blum, Michael J.; Bryant, Juliet E.; et al.; Global population divergence and admixture of the brown rat (Rattus norvegicus); The Royal Society; Proceedings of the Royal Society of London. Series B: Biological Sciences; 283; 1841; 10-2016; 1-9 0962-8452 CONICET Digital CONICET
url	http://hdl.handle.net/11336/86051
identifier_str_mv	Puckett, Emily E.; Park, Jane; Combs, Matthew; Blum, Michael J.; Bryant, Juliet E.; et al.; Global population divergence and admixture of the brown rat (Rattus norvegicus); The Royal Society; Proceedings of the Royal Society of London. Series B: Biological Sciences; 283; 1841; 10-2016; 1-9 0962-8452 CONICET Digital CONICET
dc.language.none.fl_str_mv	eng
language	eng
dc.relation.none.fl_str_mv	info:eu-repo/semantics/altIdentifier/doi/10.1098/rspb.2016.1762 info:eu-repo/semantics/altIdentifier/url/https://royalsocietypublishing.org/doi/10.1098/rspb.2016.1762
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dc.publisher.none.fl_str_mv	The Royal Society
publisher.none.fl_str_mv	The Royal Society
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repository.mail.fl_str_mv	dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar
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Global population divergence and admixture of the brown rat (Rattus norvegicus)

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