Functional classification of plant long noncoding RNAs: a transcript is known by the company it keeps

Autores
Lucero, Leandro Exequiel; Ferrero, Lucia; Fonouni-farde, Camille Audrey; Ariel, Federico Damian
Año de publicación
2020
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
The extraordinary maturation in high‐throughput sequencing technologies has revealed the existence of a complex network of transcripts in eukaryotic organisms, including thousands of long noncoding (lnc) RNAs with little or no protein‐coding capacity. Subsequent discoveries have shown that lncRNAs participate in a wide range of molecular processes, controlling gene expression and protein activity though direct interactions with proteins, DNA, or other RNA molecules. While significant advances have been achieved in the understanding of lncRNA biology in the animal kingdom, the functional characterization of plant lncRNAs is still in its infancy and remains a major challenge. In this review, we report emerging functional and mechanistic paradigms of plant lncRNAs and partner molecules and discuss how cutting‐edge technologies may help to identify and classify yet uncharacterized transcripts into functional groups.
Fil: Lucero, Leandro Exequiel. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Santa Fe. Instituto de Agrobiotecnología del Litoral. Universidad Nacional del Litoral. Instituto de Agrobiotecnología del Litoral; Argentina
Fil: Ferrero, Lucia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Santa Fe. Instituto de Agrobiotecnología del Litoral. Universidad Nacional del Litoral. Instituto de Agrobiotecnología del Litoral; Argentina
Fil: Fonouni-farde, Camille Audrey. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Santa Fe. Instituto de Agrobiotecnología del Litoral. Universidad Nacional del Litoral. Instituto de Agrobiotecnología del Litoral; Argentina
Fil: Ariel, Federico Damian. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Santa Fe. Instituto de Agrobiotecnología del Litoral. Universidad Nacional del Litoral. Instituto de Agrobiotecnología del Litoral; Argentina
Materia
PLANT LONG NONCODING RNAS
GENOME TOPOLOGY
RNA RELATED METHODOLOGIES
TRANSCRIPTION
Nivel de accesibilidad
acceso abierto
Condiciones de uso
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
Repositorio
CONICET Digital (CONICET)
Institución
Consejo Nacional de Investigaciones Científicas y Técnicas
OAI Identificador
oai:ri.conicet.gov.ar:11336/115729
Acceder
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spelling Functional classification of plant long noncoding RNAs: a transcript is known by the company it keepsLucero, Leandro ExequielFerrero, LuciaFonouni-farde, Camille AudreyAriel, Federico DamianPLANT LONG NONCODING RNASGENOME TOPOLOGYRNA RELATED METHODOLOGIESTRANSCRIPTIONhttps://purl.org/becyt/ford/1.6https://purl.org/becyt/ford/1The extraordinary maturation in high‐throughput sequencing technologies has revealed the existence of a complex network of transcripts in eukaryotic organisms, including thousands of long noncoding (lnc) RNAs with little or no protein‐coding capacity. Subsequent discoveries have shown that lncRNAs participate in a wide range of molecular processes, controlling gene expression and protein activity though direct interactions with proteins, DNA, or other RNA molecules. While significant advances have been achieved in the understanding of lncRNA biology in the animal kingdom, the functional characterization of plant lncRNAs is still in its infancy and remains a major challenge. In this review, we report emerging functional and mechanistic paradigms of plant lncRNAs and partner molecules and discuss how cutting‐edge technologies may help to identify and classify yet uncharacterized transcripts into functional groups.Fil: Lucero, Leandro Exequiel. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Santa Fe. Instituto de Agrobiotecnología del Litoral. Universidad Nacional del Litoral. Instituto de Agrobiotecnología del Litoral; ArgentinaFil: Ferrero, Lucia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Santa Fe. Instituto de Agrobiotecnología del Litoral. Universidad Nacional del Litoral. Instituto de Agrobiotecnología del Litoral; ArgentinaFil: Fonouni-farde, Camille Audrey. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Santa Fe. Instituto de Agrobiotecnología del Litoral. Universidad Nacional del Litoral. Instituto de Agrobiotecnología del Litoral; ArgentinaFil: Ariel, Federico Damian. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Santa Fe. Instituto de Agrobiotecnología del Litoral. Universidad Nacional del Litoral. Instituto de Agrobiotecnología del Litoral; ArgentinaWiley Blackwell Publishing, Inc2020-09info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/115729Lucero, Leandro Exequiel; Ferrero, Lucia; Fonouni-farde, Camille Audrey; Ariel, Federico Damian; Functional classification of plant long noncoding RNAs: a transcript is known by the company it keeps; Wiley Blackwell Publishing, Inc; New Phytologist; 9-20200028-646XCONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/url/https://onlinelibrary.wiley.com/doi/abs/10.1111/nph.16903info:eu-repo/semantics/altIdentifier/doi/10.1111/nph.16903info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-sa/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-09-03T10:04:18Zoai:ri.conicet.gov.ar:11336/115729instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-09-03 10:04:19.099CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse
dc.title.none.fl_str_mv Functional classification of plant long noncoding RNAs: a transcript is known by the company it keeps
title Functional classification of plant long noncoding RNAs: a transcript is known by the company it keeps
spellingShingle Functional classification of plant long noncoding RNAs: a transcript is known by the company it keeps
Lucero, Leandro Exequiel
PLANT LONG NONCODING RNAS
GENOME TOPOLOGY
RNA RELATED METHODOLOGIES
TRANSCRIPTION
title_short Functional classification of plant long noncoding RNAs: a transcript is known by the company it keeps
title_full Functional classification of plant long noncoding RNAs: a transcript is known by the company it keeps
title_fullStr Functional classification of plant long noncoding RNAs: a transcript is known by the company it keeps
title_full_unstemmed Functional classification of plant long noncoding RNAs: a transcript is known by the company it keeps
title_sort Functional classification of plant long noncoding RNAs: a transcript is known by the company it keeps
dc.creator.none.fl_str_mv Lucero, Leandro Exequiel
Ferrero, Lucia
Fonouni-farde, Camille Audrey
Ariel, Federico Damian
author Lucero, Leandro Exequiel
author_facet Lucero, Leandro Exequiel
Ferrero, Lucia
Fonouni-farde, Camille Audrey
Ariel, Federico Damian
author_role author
author2 Ferrero, Lucia
Fonouni-farde, Camille Audrey
Ariel, Federico Damian
author2_role author
author
author
dc.subject.none.fl_str_mv PLANT LONG NONCODING RNAS
GENOME TOPOLOGY
RNA RELATED METHODOLOGIES
TRANSCRIPTION
topic PLANT LONG NONCODING RNAS
GENOME TOPOLOGY
RNA RELATED METHODOLOGIES
TRANSCRIPTION
purl_subject.fl_str_mv https://purl.org/becyt/ford/1.6
https://purl.org/becyt/ford/1
dc.description.none.fl_txt_mv The extraordinary maturation in high‐throughput sequencing technologies has revealed the existence of a complex network of transcripts in eukaryotic organisms, including thousands of long noncoding (lnc) RNAs with little or no protein‐coding capacity. Subsequent discoveries have shown that lncRNAs participate in a wide range of molecular processes, controlling gene expression and protein activity though direct interactions with proteins, DNA, or other RNA molecules. While significant advances have been achieved in the understanding of lncRNA biology in the animal kingdom, the functional characterization of plant lncRNAs is still in its infancy and remains a major challenge. In this review, we report emerging functional and mechanistic paradigms of plant lncRNAs and partner molecules and discuss how cutting‐edge technologies may help to identify and classify yet uncharacterized transcripts into functional groups.
Fil: Lucero, Leandro Exequiel. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Santa Fe. Instituto de Agrobiotecnología del Litoral. Universidad Nacional del Litoral. Instituto de Agrobiotecnología del Litoral; Argentina
Fil: Ferrero, Lucia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Santa Fe. Instituto de Agrobiotecnología del Litoral. Universidad Nacional del Litoral. Instituto de Agrobiotecnología del Litoral; Argentina
Fil: Fonouni-farde, Camille Audrey. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Santa Fe. Instituto de Agrobiotecnología del Litoral. Universidad Nacional del Litoral. Instituto de Agrobiotecnología del Litoral; Argentina
Fil: Ariel, Federico Damian. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Santa Fe. Instituto de Agrobiotecnología del Litoral. Universidad Nacional del Litoral. Instituto de Agrobiotecnología del Litoral; Argentina
description The extraordinary maturation in high‐throughput sequencing technologies has revealed the existence of a complex network of transcripts in eukaryotic organisms, including thousands of long noncoding (lnc) RNAs with little or no protein‐coding capacity. Subsequent discoveries have shown that lncRNAs participate in a wide range of molecular processes, controlling gene expression and protein activity though direct interactions with proteins, DNA, or other RNA molecules. While significant advances have been achieved in the understanding of lncRNA biology in the animal kingdom, the functional characterization of plant lncRNAs is still in its infancy and remains a major challenge. In this review, we report emerging functional and mechanistic paradigms of plant lncRNAs and partner molecules and discuss how cutting‐edge technologies may help to identify and classify yet uncharacterized transcripts into functional groups.
publishDate 2020
dc.date.none.fl_str_mv 2020-09
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/11336/115729
Lucero, Leandro Exequiel; Ferrero, Lucia; Fonouni-farde, Camille Audrey; Ariel, Federico Damian; Functional classification of plant long noncoding RNAs: a transcript is known by the company it keeps; Wiley Blackwell Publishing, Inc; New Phytologist; 9-2020
0028-646X
CONICET Digital
CONICET
url http://hdl.handle.net/11336/115729
identifier_str_mv Lucero, Leandro Exequiel; Ferrero, Lucia; Fonouni-farde, Camille Audrey; Ariel, Federico Damian; Functional classification of plant long noncoding RNAs: a transcript is known by the company it keeps; Wiley Blackwell Publishing, Inc; New Phytologist; 9-2020
0028-646X
CONICET Digital
CONICET
dc.language.none.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv info:eu-repo/semantics/altIdentifier/url/https://onlinelibrary.wiley.com/doi/abs/10.1111/nph.16903
info:eu-repo/semantics/altIdentifier/doi/10.1111/nph.16903
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
eu_rights_str_mv openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
dc.format.none.fl_str_mv application/pdf
application/pdf
dc.publisher.none.fl_str_mv Wiley Blackwell Publishing, Inc
publisher.none.fl_str_mv Wiley Blackwell Publishing, Inc
dc.source.none.fl_str_mv reponame:CONICET Digital (CONICET)
instname:Consejo Nacional de Investigaciones Científicas y Técnicas
reponame_str CONICET Digital (CONICET)
collection CONICET Digital (CONICET)
instname_str Consejo Nacional de Investigaciones Científicas y Técnicas
repository.name.fl_str_mv CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas
repository.mail.fl_str_mv dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar
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score 13.13397

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