Argonaute2 attenuates active transcription by limiting RNA Polymerase II elongation in Drosophila melanogaster
- Autores
- Nazer, Ezequiel; Dale, Ryan K.; Palmer, Cameron; Lei, Elissa P.
- Año de publicación
- 2018
- Idioma
- inglés
- Tipo de recurso
- artículo
- Estado
- versión publicada
- Descripción
- Increasing lines of evidence support that Argonaute2 (AGO2) harbors several nuclear functions in metazoa. In particular, Drosophila AGO2 modulates transcription of developmentally regulated genes; however, the molecular mechanisms behind AGO2 recruitment into chromatin and its function in transcription have not been deeply explored. In this study, we show that Drosophila AGO2 chromatin association depends on active transcription. In order to gain insight into how AGO2 controls transcription, we performed differential ChIP-seq analysis for RNA Polymerase II (Pol II) upon depletion of AGO2. Remarkably, we find specific accumulation of the elongating but not initiating form of Pol II after AGO2 knockdown, suggesting that AGO2 impairs transcription elongation. Finally, AGO2 also affects Negative Elongation Factor (NELF) chromatin association but not the Cyclin Dependent Kinase 9 (CDK9). Altogether, these results provide key insights into the molecular role of AGO2 in attenuating elongation of certain actively transcribed genes.
Fil: Nazer, Ezequiel. Nuclear Organization And Gene Expression Section; Estados Unidos. National Institutes of Health; Estados Unidos. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Fisiología, Biología Molecular y Neurociencias. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Fisiología, Biología Molecular y Neurociencias; Argentina
Fil: Dale, Ryan K.. National Institutes of Health; Estados Unidos
Fil: Palmer, Cameron. National Institutes of Health; Estados Unidos
Fil: Lei, Elissa P.. National Institutes of Health; Estados Unidos. Nuclear Organization And Gene Expression Section; Estados Unidos - Materia
-
Argonaute2
Transcription regulation
Chromatin
RNA PoL II - Nivel de accesibilidad
- acceso abierto
- Condiciones de uso
- https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
- Repositorio
- Institución
- Consejo Nacional de Investigaciones Científicas y Técnicas
- OAI Identificador
- oai:ri.conicet.gov.ar:11336/88525
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Argonaute2 attenuates active transcription by limiting RNA Polymerase II elongation in Drosophila melanogasterNazer, EzequielDale, Ryan K.Palmer, CameronLei, Elissa P.Argonaute2Transcription regulationChromatinRNA PoL IIhttps://purl.org/becyt/ford/1.6https://purl.org/becyt/ford/1Increasing lines of evidence support that Argonaute2 (AGO2) harbors several nuclear functions in metazoa. In particular, Drosophila AGO2 modulates transcription of developmentally regulated genes; however, the molecular mechanisms behind AGO2 recruitment into chromatin and its function in transcription have not been deeply explored. In this study, we show that Drosophila AGO2 chromatin association depends on active transcription. In order to gain insight into how AGO2 controls transcription, we performed differential ChIP-seq analysis for RNA Polymerase II (Pol II) upon depletion of AGO2. Remarkably, we find specific accumulation of the elongating but not initiating form of Pol II after AGO2 knockdown, suggesting that AGO2 impairs transcription elongation. Finally, AGO2 also affects Negative Elongation Factor (NELF) chromatin association but not the Cyclin Dependent Kinase 9 (CDK9). Altogether, these results provide key insights into the molecular role of AGO2 in attenuating elongation of certain actively transcribed genes.Fil: Nazer, Ezequiel. Nuclear Organization And Gene Expression Section; Estados Unidos. National Institutes of Health; Estados Unidos. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Fisiología, Biología Molecular y Neurociencias. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Fisiología, Biología Molecular y Neurociencias; ArgentinaFil: Dale, Ryan K.. National Institutes of Health; Estados UnidosFil: Palmer, Cameron. National Institutes of Health; Estados UnidosFil: Lei, Elissa P.. National Institutes of Health; Estados Unidos. Nuclear Organization And Gene Expression Section; Estados UnidosNature2018-12info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/88525Nazer, Ezequiel; Dale, Ryan K.; Palmer, Cameron; Lei, Elissa P.; Argonaute2 attenuates active transcription by limiting RNA Polymerase II elongation in Drosophila melanogaster; Nature; Scientific Reports; 8; 1; 12-2018; 1-102045-2322CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/doi/10.1038/s41598-018-34115-1info:eu-repo/semantics/altIdentifier/url/https://www.nature.com/articles/s41598-018-34115-1info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-sa/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-10-15T14:23:12Zoai:ri.conicet.gov.ar:11336/88525instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-10-15 14:23:12.878CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse |
dc.title.none.fl_str_mv |
Argonaute2 attenuates active transcription by limiting RNA Polymerase II elongation in Drosophila melanogaster |
title |
Argonaute2 attenuates active transcription by limiting RNA Polymerase II elongation in Drosophila melanogaster |
spellingShingle |
Argonaute2 attenuates active transcription by limiting RNA Polymerase II elongation in Drosophila melanogaster Nazer, Ezequiel Argonaute2 Transcription regulation Chromatin RNA PoL II |
title_short |
Argonaute2 attenuates active transcription by limiting RNA Polymerase II elongation in Drosophila melanogaster |
title_full |
Argonaute2 attenuates active transcription by limiting RNA Polymerase II elongation in Drosophila melanogaster |
title_fullStr |
Argonaute2 attenuates active transcription by limiting RNA Polymerase II elongation in Drosophila melanogaster |
title_full_unstemmed |
Argonaute2 attenuates active transcription by limiting RNA Polymerase II elongation in Drosophila melanogaster |
title_sort |
Argonaute2 attenuates active transcription by limiting RNA Polymerase II elongation in Drosophila melanogaster |
dc.creator.none.fl_str_mv |
Nazer, Ezequiel Dale, Ryan K. Palmer, Cameron Lei, Elissa P. |
author |
Nazer, Ezequiel |
author_facet |
Nazer, Ezequiel Dale, Ryan K. Palmer, Cameron Lei, Elissa P. |
author_role |
author |
author2 |
Dale, Ryan K. Palmer, Cameron Lei, Elissa P. |
author2_role |
author author author |
dc.subject.none.fl_str_mv |
Argonaute2 Transcription regulation Chromatin RNA PoL II |
topic |
Argonaute2 Transcription regulation Chromatin RNA PoL II |
purl_subject.fl_str_mv |
https://purl.org/becyt/ford/1.6 https://purl.org/becyt/ford/1 |
dc.description.none.fl_txt_mv |
Increasing lines of evidence support that Argonaute2 (AGO2) harbors several nuclear functions in metazoa. In particular, Drosophila AGO2 modulates transcription of developmentally regulated genes; however, the molecular mechanisms behind AGO2 recruitment into chromatin and its function in transcription have not been deeply explored. In this study, we show that Drosophila AGO2 chromatin association depends on active transcription. In order to gain insight into how AGO2 controls transcription, we performed differential ChIP-seq analysis for RNA Polymerase II (Pol II) upon depletion of AGO2. Remarkably, we find specific accumulation of the elongating but not initiating form of Pol II after AGO2 knockdown, suggesting that AGO2 impairs transcription elongation. Finally, AGO2 also affects Negative Elongation Factor (NELF) chromatin association but not the Cyclin Dependent Kinase 9 (CDK9). Altogether, these results provide key insights into the molecular role of AGO2 in attenuating elongation of certain actively transcribed genes. Fil: Nazer, Ezequiel. Nuclear Organization And Gene Expression Section; Estados Unidos. National Institutes of Health; Estados Unidos. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Fisiología, Biología Molecular y Neurociencias. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Fisiología, Biología Molecular y Neurociencias; Argentina Fil: Dale, Ryan K.. National Institutes of Health; Estados Unidos Fil: Palmer, Cameron. National Institutes of Health; Estados Unidos Fil: Lei, Elissa P.. National Institutes of Health; Estados Unidos. Nuclear Organization And Gene Expression Section; Estados Unidos |
description |
Increasing lines of evidence support that Argonaute2 (AGO2) harbors several nuclear functions in metazoa. In particular, Drosophila AGO2 modulates transcription of developmentally regulated genes; however, the molecular mechanisms behind AGO2 recruitment into chromatin and its function in transcription have not been deeply explored. In this study, we show that Drosophila AGO2 chromatin association depends on active transcription. In order to gain insight into how AGO2 controls transcription, we performed differential ChIP-seq analysis for RNA Polymerase II (Pol II) upon depletion of AGO2. Remarkably, we find specific accumulation of the elongating but not initiating form of Pol II after AGO2 knockdown, suggesting that AGO2 impairs transcription elongation. Finally, AGO2 also affects Negative Elongation Factor (NELF) chromatin association but not the Cyclin Dependent Kinase 9 (CDK9). Altogether, these results provide key insights into the molecular role of AGO2 in attenuating elongation of certain actively transcribed genes. |
publishDate |
2018 |
dc.date.none.fl_str_mv |
2018-12 |
dc.type.none.fl_str_mv |
info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion http://purl.org/coar/resource_type/c_6501 info:ar-repo/semantics/articulo |
format |
article |
status_str |
publishedVersion |
dc.identifier.none.fl_str_mv |
http://hdl.handle.net/11336/88525 Nazer, Ezequiel; Dale, Ryan K.; Palmer, Cameron; Lei, Elissa P.; Argonaute2 attenuates active transcription by limiting RNA Polymerase II elongation in Drosophila melanogaster; Nature; Scientific Reports; 8; 1; 12-2018; 1-10 2045-2322 CONICET Digital CONICET |
url |
http://hdl.handle.net/11336/88525 |
identifier_str_mv |
Nazer, Ezequiel; Dale, Ryan K.; Palmer, Cameron; Lei, Elissa P.; Argonaute2 attenuates active transcription by limiting RNA Polymerase II elongation in Drosophila melanogaster; Nature; Scientific Reports; 8; 1; 12-2018; 1-10 2045-2322 CONICET Digital CONICET |
dc.language.none.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
info:eu-repo/semantics/altIdentifier/doi/10.1038/s41598-018-34115-1 info:eu-repo/semantics/altIdentifier/url/https://www.nature.com/articles/s41598-018-34115-1 |
dc.rights.none.fl_str_mv |
info:eu-repo/semantics/openAccess https://creativecommons.org/licenses/by-nc-sa/2.5/ar/ |
eu_rights_str_mv |
openAccess |
rights_invalid_str_mv |
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/ |
dc.format.none.fl_str_mv |
application/pdf application/pdf |
dc.publisher.none.fl_str_mv |
Nature |
publisher.none.fl_str_mv |
Nature |
dc.source.none.fl_str_mv |
reponame:CONICET Digital (CONICET) instname:Consejo Nacional de Investigaciones Científicas y Técnicas |
reponame_str |
CONICET Digital (CONICET) |
collection |
CONICET Digital (CONICET) |
instname_str |
Consejo Nacional de Investigaciones Científicas y Técnicas |
repository.name.fl_str_mv |
CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas |
repository.mail.fl_str_mv |
dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar |
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1846082638371094528 |
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13.221938 |