Relationships of the wild peanut species, section Arachis : A resource for botanical classification, crop improvement, and germplasm management

Autores
Leal Bertioli, Soraya C.M.; de Blas, Francisco Javier; Carolina Chavarro, M.; Simpson, Charles E.; Valls, José Francisco M.; Tallury, Shyam P.; Moretzsohn, Márcio C.; Custodio, Adriana R.; Thomas Stalker, H.; Seijo, José Guillermo; Bertioli, David J.
Año de publicación
2024
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
Premise: Wild species are strategic sources of valuable traits to be introduced into crops through hybridization. For peanut, the 33 currently described wild species in the section Arachis are particularly important because of their sexual compatibility with the domesticated species, Arachis hypogaea. Although numerous wild accessions are carefully preserved in seed banks, their morphological similarities pose challenges to routine classification. Methods: Using a high‐density array, we genotyped 272 accessions encompassing all diploid species in section Arachis. Detailed relationships between accessions and species were revealed through phylogenetic analyses and interpreted using the expertise of germplasm collectors and curators. Results: Two main groups were identified: one with A genome species and the other with B, D, F, G, and K genomes. Species groupings generally showed clear boundaries. Structure within groups was informative, for instance, revealing the history of the proto‐domesticate A. stenosperma. However, some groupings suggested multiple sibling species. Others were polyphyletic, indicating the need for taxonomic revision. Annual species were better defined than perennial ones, revealing limitations in applying classical and phylogenetic species concepts to the genus. We suggest new species assignments for several accessions. Conclusions: Curated by germplasm collectors and curators, this analysis of species relationships lays the foundation for future species descriptions, classification of unknown accessions, and germplasm use for peanut improvement. It supports the conservation and curation of current germplasm, both critical tasks considering the threats to the genus posed by habitat loss and the current restrictions on new collections and germplasm transfer.
Fil: Leal Bertioli, Soraya C.M.. University Of Georgia. College Of Agricultural & Environmental Sciences;
Fil: de Blas, Francisco Javier. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Nordeste. Instituto de Botánica del Nordeste. Universidad Nacional del Nordeste. Facultad de Ciencias Agrarias. Instituto de Botánica del Nordeste; Argentina. University Of Georgia. College Of Agricultural & Environmental Sciences;
Fil: Carolina Chavarro, M.. University Of Georgia. College Of Agricultural & Environmental Sciences;
Fil: Simpson, Charles E.. Texas A&M University; Estados Unidos
Fil: Valls, José Francisco M.. Ministerio da Agricultura Pecuaria e Abastecimento de Brasil. Empresa Brasileira de Pesquisa Agropecuaria; Brasil
Fil: Tallury, Shyam P.. The Federal Government of the United States. Department of Agriculture; Argentina
Fil: Moretzsohn, Márcio C.. Ministerio da Agricultura Pecuaria e Abastecimento de Brasil. Empresa Brasileira de Pesquisa Agropecuaria; Brasil
Fil: Custodio, Adriana R.. Ministerio da Agricultura Pecuaria e Abastecimento de Brasil. Empresa Brasileira de Pesquisa Agropecuaria; Brasil
Fil: Thomas Stalker, H.. North Carolina State University; Estados Unidos
Fil: Seijo, José Guillermo. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Nordeste. Instituto de Botánica del Nordeste. Universidad Nacional del Nordeste. Facultad de Ciencias Agrarias. Instituto de Botánica del Nordeste; Argentina. Universidad Nacional del Nordeste. Facultad de Ciencias Exactas y Naturales y Agrimensura; Argentina
Fil: Bertioli, David J.. University Of Georgia. College Of Agricultural & Environmental Sciences;
Materia
Crop wild relatives
Fabaceae
Germplasm banks
Introgression
Legume
Peanut
Phylogeny
Pre-breeding
Single nucleotide polymorphism (SNP)
Taxonomy
Nivel de accesibilidad
acceso abierto
Condiciones de uso
https://creativecommons.org/licenses/by-nc/2.5/ar/
Repositorio
CONICET Digital (CONICET)
Institución
Consejo Nacional de Investigaciones Científicas y Técnicas
OAI Identificador
oai:ri.conicet.gov.ar:11336/262056

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network_acronym_str CONICETDig
repository_id_str 3498
network_name_str CONICET Digital (CONICET)
spelling Relationships of the wild peanut species, section Arachis : A resource for botanical classification, crop improvement, and germplasm managementLeal Bertioli, Soraya C.M.de Blas, Francisco JavierCarolina Chavarro, M.Simpson, Charles E.Valls, José Francisco M.Tallury, Shyam P.Moretzsohn, Márcio C.Custodio, Adriana R.Thomas Stalker, H.Seijo, José GuillermoBertioli, David J.Crop wild relativesFabaceaeGermplasm banksIntrogressionLegumePeanutPhylogenyPre-breedingSingle nucleotide polymorphism (SNP)Taxonomyhttps://purl.org/becyt/ford/1.6https://purl.org/becyt/ford/1Premise: Wild species are strategic sources of valuable traits to be introduced into crops through hybridization. For peanut, the 33 currently described wild species in the section Arachis are particularly important because of their sexual compatibility with the domesticated species, Arachis hypogaea. Although numerous wild accessions are carefully preserved in seed banks, their morphological similarities pose challenges to routine classification. Methods: Using a high‐density array, we genotyped 272 accessions encompassing all diploid species in section Arachis. Detailed relationships between accessions and species were revealed through phylogenetic analyses and interpreted using the expertise of germplasm collectors and curators. Results: Two main groups were identified: one with A genome species and the other with B, D, F, G, and K genomes. Species groupings generally showed clear boundaries. Structure within groups was informative, for instance, revealing the history of the proto‐domesticate A. stenosperma. However, some groupings suggested multiple sibling species. Others were polyphyletic, indicating the need for taxonomic revision. Annual species were better defined than perennial ones, revealing limitations in applying classical and phylogenetic species concepts to the genus. We suggest new species assignments for several accessions. Conclusions: Curated by germplasm collectors and curators, this analysis of species relationships lays the foundation for future species descriptions, classification of unknown accessions, and germplasm use for peanut improvement. It supports the conservation and curation of current germplasm, both critical tasks considering the threats to the genus posed by habitat loss and the current restrictions on new collections and germplasm transfer.Fil: Leal Bertioli, Soraya C.M.. University Of Georgia. College Of Agricultural & Environmental Sciences;Fil: de Blas, Francisco Javier. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Nordeste. Instituto de Botánica del Nordeste. Universidad Nacional del Nordeste. Facultad de Ciencias Agrarias. Instituto de Botánica del Nordeste; Argentina. University Of Georgia. College Of Agricultural & Environmental Sciences;Fil: Carolina Chavarro, M.. University Of Georgia. College Of Agricultural & Environmental Sciences;Fil: Simpson, Charles E.. Texas A&M University; Estados UnidosFil: Valls, José Francisco M.. Ministerio da Agricultura Pecuaria e Abastecimento de Brasil. Empresa Brasileira de Pesquisa Agropecuaria; BrasilFil: Tallury, Shyam P.. The Federal Government of the United States. Department of Agriculture; ArgentinaFil: Moretzsohn, Márcio C.. Ministerio da Agricultura Pecuaria e Abastecimento de Brasil. Empresa Brasileira de Pesquisa Agropecuaria; BrasilFil: Custodio, Adriana R.. Ministerio da Agricultura Pecuaria e Abastecimento de Brasil. Empresa Brasileira de Pesquisa Agropecuaria; BrasilFil: Thomas Stalker, H.. North Carolina State University; Estados UnidosFil: Seijo, José Guillermo. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Nordeste. Instituto de Botánica del Nordeste. Universidad Nacional del Nordeste. Facultad de Ciencias Agrarias. Instituto de Botánica del Nordeste; Argentina. Universidad Nacional del Nordeste. Facultad de Ciencias Exactas y Naturales y Agrimensura; ArgentinaFil: Bertioli, David J.. University Of Georgia. College Of Agricultural & Environmental Sciences;Botanical Society of America2024-06info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/262056Leal Bertioli, Soraya C.M.; de Blas, Francisco Javier; Carolina Chavarro, M.; Simpson, Charles E.; Valls, José Francisco M.; et al.; Relationships of the wild peanut species, section Arachis : A resource for botanical classification, crop improvement, and germplasm management; Botanical Society of America; American Journal of Botany; 111; 6; 6-2024; 1-210002-9122CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/url/https://bsapubs.onlinelibrary.wiley.com/doi/10.1002/ajb2.16357info:eu-repo/semantics/altIdentifier/doi/10.1002/ajb2.16357info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-09-03T10:01:14Zoai:ri.conicet.gov.ar:11336/262056instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-09-03 10:01:14.432CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse
dc.title.none.fl_str_mv Relationships of the wild peanut species, section Arachis : A resource for botanical classification, crop improvement, and germplasm management
title Relationships of the wild peanut species, section Arachis : A resource for botanical classification, crop improvement, and germplasm management
spellingShingle Relationships of the wild peanut species, section Arachis : A resource for botanical classification, crop improvement, and germplasm management
Leal Bertioli, Soraya C.M.
Crop wild relatives
Fabaceae
Germplasm banks
Introgression
Legume
Peanut
Phylogeny
Pre-breeding
Single nucleotide polymorphism (SNP)
Taxonomy
title_short Relationships of the wild peanut species, section Arachis : A resource for botanical classification, crop improvement, and germplasm management
title_full Relationships of the wild peanut species, section Arachis : A resource for botanical classification, crop improvement, and germplasm management
title_fullStr Relationships of the wild peanut species, section Arachis : A resource for botanical classification, crop improvement, and germplasm management
title_full_unstemmed Relationships of the wild peanut species, section Arachis : A resource for botanical classification, crop improvement, and germplasm management
title_sort Relationships of the wild peanut species, section Arachis : A resource for botanical classification, crop improvement, and germplasm management
dc.creator.none.fl_str_mv Leal Bertioli, Soraya C.M.
de Blas, Francisco Javier
Carolina Chavarro, M.
Simpson, Charles E.
Valls, José Francisco M.
Tallury, Shyam P.
Moretzsohn, Márcio C.
Custodio, Adriana R.
Thomas Stalker, H.
Seijo, José Guillermo
Bertioli, David J.
author Leal Bertioli, Soraya C.M.
author_facet Leal Bertioli, Soraya C.M.
de Blas, Francisco Javier
Carolina Chavarro, M.
Simpson, Charles E.
Valls, José Francisco M.
Tallury, Shyam P.
Moretzsohn, Márcio C.
Custodio, Adriana R.
Thomas Stalker, H.
Seijo, José Guillermo
Bertioli, David J.
author_role author
author2 de Blas, Francisco Javier
Carolina Chavarro, M.
Simpson, Charles E.
Valls, José Francisco M.
Tallury, Shyam P.
Moretzsohn, Márcio C.
Custodio, Adriana R.
Thomas Stalker, H.
Seijo, José Guillermo
Bertioli, David J.
author2_role author
author
author
author
author
author
author
author
author
author
dc.subject.none.fl_str_mv Crop wild relatives
Fabaceae
Germplasm banks
Introgression
Legume
Peanut
Phylogeny
Pre-breeding
Single nucleotide polymorphism (SNP)
Taxonomy
topic Crop wild relatives
Fabaceae
Germplasm banks
Introgression
Legume
Peanut
Phylogeny
Pre-breeding
Single nucleotide polymorphism (SNP)
Taxonomy
purl_subject.fl_str_mv https://purl.org/becyt/ford/1.6
https://purl.org/becyt/ford/1
dc.description.none.fl_txt_mv Premise: Wild species are strategic sources of valuable traits to be introduced into crops through hybridization. For peanut, the 33 currently described wild species in the section Arachis are particularly important because of their sexual compatibility with the domesticated species, Arachis hypogaea. Although numerous wild accessions are carefully preserved in seed banks, their morphological similarities pose challenges to routine classification. Methods: Using a high‐density array, we genotyped 272 accessions encompassing all diploid species in section Arachis. Detailed relationships between accessions and species were revealed through phylogenetic analyses and interpreted using the expertise of germplasm collectors and curators. Results: Two main groups were identified: one with A genome species and the other with B, D, F, G, and K genomes. Species groupings generally showed clear boundaries. Structure within groups was informative, for instance, revealing the history of the proto‐domesticate A. stenosperma. However, some groupings suggested multiple sibling species. Others were polyphyletic, indicating the need for taxonomic revision. Annual species were better defined than perennial ones, revealing limitations in applying classical and phylogenetic species concepts to the genus. We suggest new species assignments for several accessions. Conclusions: Curated by germplasm collectors and curators, this analysis of species relationships lays the foundation for future species descriptions, classification of unknown accessions, and germplasm use for peanut improvement. It supports the conservation and curation of current germplasm, both critical tasks considering the threats to the genus posed by habitat loss and the current restrictions on new collections and germplasm transfer.
Fil: Leal Bertioli, Soraya C.M.. University Of Georgia. College Of Agricultural & Environmental Sciences;
Fil: de Blas, Francisco Javier. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Nordeste. Instituto de Botánica del Nordeste. Universidad Nacional del Nordeste. Facultad de Ciencias Agrarias. Instituto de Botánica del Nordeste; Argentina. University Of Georgia. College Of Agricultural & Environmental Sciences;
Fil: Carolina Chavarro, M.. University Of Georgia. College Of Agricultural & Environmental Sciences;
Fil: Simpson, Charles E.. Texas A&M University; Estados Unidos
Fil: Valls, José Francisco M.. Ministerio da Agricultura Pecuaria e Abastecimento de Brasil. Empresa Brasileira de Pesquisa Agropecuaria; Brasil
Fil: Tallury, Shyam P.. The Federal Government of the United States. Department of Agriculture; Argentina
Fil: Moretzsohn, Márcio C.. Ministerio da Agricultura Pecuaria e Abastecimento de Brasil. Empresa Brasileira de Pesquisa Agropecuaria; Brasil
Fil: Custodio, Adriana R.. Ministerio da Agricultura Pecuaria e Abastecimento de Brasil. Empresa Brasileira de Pesquisa Agropecuaria; Brasil
Fil: Thomas Stalker, H.. North Carolina State University; Estados Unidos
Fil: Seijo, José Guillermo. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Nordeste. Instituto de Botánica del Nordeste. Universidad Nacional del Nordeste. Facultad de Ciencias Agrarias. Instituto de Botánica del Nordeste; Argentina. Universidad Nacional del Nordeste. Facultad de Ciencias Exactas y Naturales y Agrimensura; Argentina
Fil: Bertioli, David J.. University Of Georgia. College Of Agricultural & Environmental Sciences;
description Premise: Wild species are strategic sources of valuable traits to be introduced into crops through hybridization. For peanut, the 33 currently described wild species in the section Arachis are particularly important because of their sexual compatibility with the domesticated species, Arachis hypogaea. Although numerous wild accessions are carefully preserved in seed banks, their morphological similarities pose challenges to routine classification. Methods: Using a high‐density array, we genotyped 272 accessions encompassing all diploid species in section Arachis. Detailed relationships between accessions and species were revealed through phylogenetic analyses and interpreted using the expertise of germplasm collectors and curators. Results: Two main groups were identified: one with A genome species and the other with B, D, F, G, and K genomes. Species groupings generally showed clear boundaries. Structure within groups was informative, for instance, revealing the history of the proto‐domesticate A. stenosperma. However, some groupings suggested multiple sibling species. Others were polyphyletic, indicating the need for taxonomic revision. Annual species were better defined than perennial ones, revealing limitations in applying classical and phylogenetic species concepts to the genus. We suggest new species assignments for several accessions. Conclusions: Curated by germplasm collectors and curators, this analysis of species relationships lays the foundation for future species descriptions, classification of unknown accessions, and germplasm use for peanut improvement. It supports the conservation and curation of current germplasm, both critical tasks considering the threats to the genus posed by habitat loss and the current restrictions on new collections and germplasm transfer.
publishDate 2024
dc.date.none.fl_str_mv 2024-06
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/11336/262056
Leal Bertioli, Soraya C.M.; de Blas, Francisco Javier; Carolina Chavarro, M.; Simpson, Charles E.; Valls, José Francisco M.; et al.; Relationships of the wild peanut species, section Arachis : A resource for botanical classification, crop improvement, and germplasm management; Botanical Society of America; American Journal of Botany; 111; 6; 6-2024; 1-21
0002-9122
CONICET Digital
CONICET
url http://hdl.handle.net/11336/262056
identifier_str_mv Leal Bertioli, Soraya C.M.; de Blas, Francisco Javier; Carolina Chavarro, M.; Simpson, Charles E.; Valls, José Francisco M.; et al.; Relationships of the wild peanut species, section Arachis : A resource for botanical classification, crop improvement, and germplasm management; Botanical Society of America; American Journal of Botany; 111; 6; 6-2024; 1-21
0002-9122
CONICET Digital
CONICET
dc.language.none.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv info:eu-repo/semantics/altIdentifier/url/https://bsapubs.onlinelibrary.wiley.com/doi/10.1002/ajb2.16357
info:eu-repo/semantics/altIdentifier/doi/10.1002/ajb2.16357
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
https://creativecommons.org/licenses/by-nc/2.5/ar/
eu_rights_str_mv openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by-nc/2.5/ar/
dc.format.none.fl_str_mv application/pdf
application/pdf
application/pdf
dc.publisher.none.fl_str_mv Botanical Society of America
publisher.none.fl_str_mv Botanical Society of America
dc.source.none.fl_str_mv reponame:CONICET Digital (CONICET)
instname:Consejo Nacional de Investigaciones Científicas y Técnicas
reponame_str CONICET Digital (CONICET)
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instname_str Consejo Nacional de Investigaciones Científicas y Técnicas
repository.name.fl_str_mv CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas
repository.mail.fl_str_mv dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar
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