Biodiversity into your hands - A call for a virtual global natural history ‘metacollection’
- Autores
- Balke, Michael; Schmidt, Stefan; Hausmann, Axel; Toussaint, Emmanuel F. A.; Bergsten, Johannes; Buffington, Matthew; Häuser, Christoph L.; Kroupa, Alexander; Hagedorn, Gregor; Riedel, Alexander; Polaszek, Andrew; Ubaidillah, Rosichon; Krogmann, Lars; Zwick, Andreas; Fikácek, Martin; Hájek, Jiří; Michat, Mariano Cruz; Dietrich, Christopher; la Salle, John; Mantle, Beth; Ng, Peter K. L.; Hobern, Donald
- Año de publicación
- 2013
- Idioma
- inglés
- Tipo de recurso
- artículo
- Estado
- versión publicada
- Descripción
- Background: Many scientific disciplines rely on correct taxon delineations and identifications. So does a great part of the general public as well as decision makers. Researchers, students and enthusiastic amateurs often feel frustrated because information about species remains scattered, difficult to access, or difficult to decipher. Together, this affects almost anyone who wishes to identify species or verify identifications. Many remedies have been proposed, but we argue that the role of natural history collections remains insufficiently appreciated. We suggest using state-of-the-art mass imaging technology and to join forces to create a global natural history metacollection on the internet, providing access to the morphology of tens of millions of specimens and making them available for automated digital image analysis. Discussion: Robotic high-resolution imaging technology and fast (high performance) computer-based image stitching make it now feasible to digitize entire collection drawers typically used for arthropod collections, or trays or containers used for other objects. Resolutions of 500 megapixels and much higher are already utilized to capture the contents of 40x50 cm collection drawers, providing amazing detail of specimens. Flanked by metadata entry, this helps to create access to tens of thousands of specimens in days. By setting priorities and combining the holdings of the most comprehensive collections for certain taxa, drawer digitizing offers the unique opportunity to create a global, virtual metacollection. The taxonomic and geographic coverage of such a collection could never be achieved by a single institution or individual. We argue that by joining forces, many new impulses will emerge for systematic biology, related fields and understanding of biodiversity in general. Digitizing drawers containing unidentified, little-curated specimens is a contribution towards the beginning of a new era of online curation. It also will help taxonomists and curators to discover and process the millions of “gems” of undescribed species hidden in museum accessions. Summary: Our proposal suggests creating virtual, high-resolution image resources that will, for the first time in history, provide access for expert scientists as well as students and the general public to the enormous wealth of the world’s natural history collections. We foresee that this will contribute to a better understanding, appreciation and increased use of biodiversity resources and the natural history collections serving this cause.
Fil: Balke, Michael. Ludwig Maximilians Universitat; Alemania. Zoologische Staatssammlung; Alemania
Fil: Schmidt, Stefan. Zoologische Staatssammlung; Alemania
Fil: Hausmann, Axel. Zoologische Staatssammlung; Alemania
Fil: Toussaint, Emmanuel F. A.. Ludwig Maximilians Universitat; Alemania. Zoologische Staatssammlung; Alemania
Fil: Bergsten, Johannes. Swedish Museum of Natural History; Suecia
Fil: Buffington, Matthew. United States Department of Agriculture. Agricultural Research Service; Estados Unidos
Fil: Häuser, Christoph L.. Museum für Naturkunde; Alemania
Fil: Kroupa, Alexander. Museum für Naturkunde; Alemania
Fil: Hagedorn, Gregor. Museum für Naturkunde; Alemania
Fil: Riedel, Alexander. Staatliches Museum für Naturkunde Karlsruhe; Alemania
Fil: Polaszek, Andrew. Natural History Museum; Reino Unido
Fil: Ubaidillah, Rosichon. Museum Zoologicum Bogoriense; Indonesia
Fil: Krogmann, Lars. Staatliches Museum für Naturkunde Stuttgart; Alemania
Fil: Zwick, Andreas. Staatliches Museum für Naturkunde Stuttgart; Alemania
Fil: Fikácek, Martin. National Museum; República Checa
Fil: Hájek, Jiří. National Museum; República Checa
Fil: Michat, Mariano Cruz. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Departamento de Biodiversidad y Biología Experimental; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina
Fil: Dietrich, Christopher. University of Illinois; Estados Unidos
Fil: la Salle, John. CSIRO Ecosystem Sciences; Australia
Fil: Mantle, Beth. CSIRO Ecosystem Sciences; Australia
Fil: Ng, Peter K. L.. National University of Singapore; Singapur
Fil: Hobern, Donald. GBIF Secretariat; Dinamarca - Materia
-
MASS DIGITIZATION
NATURAL HISTORY COLLECTIONS
COLLECTION ACCESS
METACOLLECTION
CYBERTAXONOMY
ONLINE RESOURCES
ROBOTIC IMAGING
ACCESSIONS
DNA EXTRACTION VOUCHERS - Nivel de accesibilidad
- acceso abierto
- Condiciones de uso
- https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
- Repositorio
- Institución
- Consejo Nacional de Investigaciones Científicas y Técnicas
- OAI Identificador
- oai:ri.conicet.gov.ar:11336/29067
Ver los metadatos del registro completo
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Biodiversity into your hands - A call for a virtual global natural history ‘metacollection’Balke, MichaelSchmidt, StefanHausmann, AxelToussaint, Emmanuel F. A.Bergsten, JohannesBuffington, MatthewHäuser, Christoph L.Kroupa, AlexanderHagedorn, GregorRiedel, AlexanderPolaszek, AndrewUbaidillah, RosichonKrogmann, LarsZwick, AndreasFikácek, MartinHájek, JiříMichat, Mariano CruzDietrich, Christopherla Salle, JohnMantle, BethNg, Peter K. L.Hobern, DonaldMASS DIGITIZATIONNATURAL HISTORY COLLECTIONSCOLLECTION ACCESSMETACOLLECTIONCYBERTAXONOMYONLINE RESOURCESROBOTIC IMAGINGACCESSIONSDNA EXTRACTION VOUCHERShttps://purl.org/becyt/ford/1.6https://purl.org/becyt/ford/1Background: Many scientific disciplines rely on correct taxon delineations and identifications. So does a great part of the general public as well as decision makers. Researchers, students and enthusiastic amateurs often feel frustrated because information about species remains scattered, difficult to access, or difficult to decipher. Together, this affects almost anyone who wishes to identify species or verify identifications. Many remedies have been proposed, but we argue that the role of natural history collections remains insufficiently appreciated. We suggest using state-of-the-art mass imaging technology and to join forces to create a global natural history metacollection on the internet, providing access to the morphology of tens of millions of specimens and making them available for automated digital image analysis. Discussion: Robotic high-resolution imaging technology and fast (high performance) computer-based image stitching make it now feasible to digitize entire collection drawers typically used for arthropod collections, or trays or containers used for other objects. Resolutions of 500 megapixels and much higher are already utilized to capture the contents of 40x50 cm collection drawers, providing amazing detail of specimens. Flanked by metadata entry, this helps to create access to tens of thousands of specimens in days. By setting priorities and combining the holdings of the most comprehensive collections for certain taxa, drawer digitizing offers the unique opportunity to create a global, virtual metacollection. The taxonomic and geographic coverage of such a collection could never be achieved by a single institution or individual. We argue that by joining forces, many new impulses will emerge for systematic biology, related fields and understanding of biodiversity in general. Digitizing drawers containing unidentified, little-curated specimens is a contribution towards the beginning of a new era of online curation. It also will help taxonomists and curators to discover and process the millions of “gems” of undescribed species hidden in museum accessions. Summary: Our proposal suggests creating virtual, high-resolution image resources that will, for the first time in history, provide access for expert scientists as well as students and the general public to the enormous wealth of the world’s natural history collections. We foresee that this will contribute to a better understanding, appreciation and increased use of biodiversity resources and the natural history collections serving this cause.Fil: Balke, Michael. Ludwig Maximilians Universitat; Alemania. Zoologische Staatssammlung; AlemaniaFil: Schmidt, Stefan. Zoologische Staatssammlung; AlemaniaFil: Hausmann, Axel. Zoologische Staatssammlung; AlemaniaFil: Toussaint, Emmanuel F. A.. Ludwig Maximilians Universitat; Alemania. Zoologische Staatssammlung; AlemaniaFil: Bergsten, Johannes. Swedish Museum of Natural History; SueciaFil: Buffington, Matthew. United States Department of Agriculture. Agricultural Research Service; Estados UnidosFil: Häuser, Christoph L.. Museum für Naturkunde; AlemaniaFil: Kroupa, Alexander. Museum für Naturkunde; AlemaniaFil: Hagedorn, Gregor. Museum für Naturkunde; AlemaniaFil: Riedel, Alexander. Staatliches Museum für Naturkunde Karlsruhe; AlemaniaFil: Polaszek, Andrew. Natural History Museum; Reino UnidoFil: Ubaidillah, Rosichon. Museum Zoologicum Bogoriense; IndonesiaFil: Krogmann, Lars. Staatliches Museum für Naturkunde Stuttgart; AlemaniaFil: Zwick, Andreas. Staatliches Museum für Naturkunde Stuttgart; AlemaniaFil: Fikácek, Martin. National Museum; República ChecaFil: Hájek, Jiří. National Museum; República ChecaFil: Michat, Mariano Cruz. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Departamento de Biodiversidad y Biología Experimental; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; ArgentinaFil: Dietrich, Christopher. University of Illinois; Estados UnidosFil: la Salle, John. CSIRO Ecosystem Sciences; AustraliaFil: Mantle, Beth. CSIRO Ecosystem Sciences; AustraliaFil: Ng, Peter K. L.. National University of Singapore; SingapurFil: Hobern, Donald. GBIF Secretariat; DinamarcaBiomed Central2013-09info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/29067Balke, Michael; Schmidt, Stefan; Hausmann, Axel; Toussaint, Emmanuel F. A.; Bergsten, Johannes; et al.; Biodiversity into your hands - A call for a virtual global natural history ‘metacollection’ ; Biomed Central; Frontiers In Zoology; 10; 55; 9-2013; 1-91742-9994CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/url/https://frontiersinzoology.biomedcentral.com/articles/10.1186/1742-9994-10-55info:eu-repo/semantics/altIdentifier/doi/10.1186/1742-9994-10-55info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-sa/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-10-15T15:11:42Zoai:ri.conicet.gov.ar:11336/29067instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-10-15 15:11:42.352CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse |
dc.title.none.fl_str_mv |
Biodiversity into your hands - A call for a virtual global natural history ‘metacollection’ |
title |
Biodiversity into your hands - A call for a virtual global natural history ‘metacollection’ |
spellingShingle |
Biodiversity into your hands - A call for a virtual global natural history ‘metacollection’ Balke, Michael MASS DIGITIZATION NATURAL HISTORY COLLECTIONS COLLECTION ACCESS METACOLLECTION CYBERTAXONOMY ONLINE RESOURCES ROBOTIC IMAGING ACCESSIONS DNA EXTRACTION VOUCHERS |
title_short |
Biodiversity into your hands - A call for a virtual global natural history ‘metacollection’ |
title_full |
Biodiversity into your hands - A call for a virtual global natural history ‘metacollection’ |
title_fullStr |
Biodiversity into your hands - A call for a virtual global natural history ‘metacollection’ |
title_full_unstemmed |
Biodiversity into your hands - A call for a virtual global natural history ‘metacollection’ |
title_sort |
Biodiversity into your hands - A call for a virtual global natural history ‘metacollection’ |
dc.creator.none.fl_str_mv |
Balke, Michael Schmidt, Stefan Hausmann, Axel Toussaint, Emmanuel F. A. Bergsten, Johannes Buffington, Matthew Häuser, Christoph L. Kroupa, Alexander Hagedorn, Gregor Riedel, Alexander Polaszek, Andrew Ubaidillah, Rosichon Krogmann, Lars Zwick, Andreas Fikácek, Martin Hájek, Jiří Michat, Mariano Cruz Dietrich, Christopher la Salle, John Mantle, Beth Ng, Peter K. L. Hobern, Donald |
author |
Balke, Michael |
author_facet |
Balke, Michael Schmidt, Stefan Hausmann, Axel Toussaint, Emmanuel F. A. Bergsten, Johannes Buffington, Matthew Häuser, Christoph L. Kroupa, Alexander Hagedorn, Gregor Riedel, Alexander Polaszek, Andrew Ubaidillah, Rosichon Krogmann, Lars Zwick, Andreas Fikácek, Martin Hájek, Jiří Michat, Mariano Cruz Dietrich, Christopher la Salle, John Mantle, Beth Ng, Peter K. L. Hobern, Donald |
author_role |
author |
author2 |
Schmidt, Stefan Hausmann, Axel Toussaint, Emmanuel F. A. Bergsten, Johannes Buffington, Matthew Häuser, Christoph L. Kroupa, Alexander Hagedorn, Gregor Riedel, Alexander Polaszek, Andrew Ubaidillah, Rosichon Krogmann, Lars Zwick, Andreas Fikácek, Martin Hájek, Jiří Michat, Mariano Cruz Dietrich, Christopher la Salle, John Mantle, Beth Ng, Peter K. L. Hobern, Donald |
author2_role |
author author author author author author author author author author author author author author author author author author author author author |
dc.subject.none.fl_str_mv |
MASS DIGITIZATION NATURAL HISTORY COLLECTIONS COLLECTION ACCESS METACOLLECTION CYBERTAXONOMY ONLINE RESOURCES ROBOTIC IMAGING ACCESSIONS DNA EXTRACTION VOUCHERS |
topic |
MASS DIGITIZATION NATURAL HISTORY COLLECTIONS COLLECTION ACCESS METACOLLECTION CYBERTAXONOMY ONLINE RESOURCES ROBOTIC IMAGING ACCESSIONS DNA EXTRACTION VOUCHERS |
purl_subject.fl_str_mv |
https://purl.org/becyt/ford/1.6 https://purl.org/becyt/ford/1 |
dc.description.none.fl_txt_mv |
Background: Many scientific disciplines rely on correct taxon delineations and identifications. So does a great part of the general public as well as decision makers. Researchers, students and enthusiastic amateurs often feel frustrated because information about species remains scattered, difficult to access, or difficult to decipher. Together, this affects almost anyone who wishes to identify species or verify identifications. Many remedies have been proposed, but we argue that the role of natural history collections remains insufficiently appreciated. We suggest using state-of-the-art mass imaging technology and to join forces to create a global natural history metacollection on the internet, providing access to the morphology of tens of millions of specimens and making them available for automated digital image analysis. Discussion: Robotic high-resolution imaging technology and fast (high performance) computer-based image stitching make it now feasible to digitize entire collection drawers typically used for arthropod collections, or trays or containers used for other objects. Resolutions of 500 megapixels and much higher are already utilized to capture the contents of 40x50 cm collection drawers, providing amazing detail of specimens. Flanked by metadata entry, this helps to create access to tens of thousands of specimens in days. By setting priorities and combining the holdings of the most comprehensive collections for certain taxa, drawer digitizing offers the unique opportunity to create a global, virtual metacollection. The taxonomic and geographic coverage of such a collection could never be achieved by a single institution or individual. We argue that by joining forces, many new impulses will emerge for systematic biology, related fields and understanding of biodiversity in general. Digitizing drawers containing unidentified, little-curated specimens is a contribution towards the beginning of a new era of online curation. It also will help taxonomists and curators to discover and process the millions of “gems” of undescribed species hidden in museum accessions. Summary: Our proposal suggests creating virtual, high-resolution image resources that will, for the first time in history, provide access for expert scientists as well as students and the general public to the enormous wealth of the world’s natural history collections. We foresee that this will contribute to a better understanding, appreciation and increased use of biodiversity resources and the natural history collections serving this cause. Fil: Balke, Michael. Ludwig Maximilians Universitat; Alemania. Zoologische Staatssammlung; Alemania Fil: Schmidt, Stefan. Zoologische Staatssammlung; Alemania Fil: Hausmann, Axel. Zoologische Staatssammlung; Alemania Fil: Toussaint, Emmanuel F. A.. Ludwig Maximilians Universitat; Alemania. Zoologische Staatssammlung; Alemania Fil: Bergsten, Johannes. Swedish Museum of Natural History; Suecia Fil: Buffington, Matthew. United States Department of Agriculture. Agricultural Research Service; Estados Unidos Fil: Häuser, Christoph L.. Museum für Naturkunde; Alemania Fil: Kroupa, Alexander. Museum für Naturkunde; Alemania Fil: Hagedorn, Gregor. Museum für Naturkunde; Alemania Fil: Riedel, Alexander. Staatliches Museum für Naturkunde Karlsruhe; Alemania Fil: Polaszek, Andrew. Natural History Museum; Reino Unido Fil: Ubaidillah, Rosichon. Museum Zoologicum Bogoriense; Indonesia Fil: Krogmann, Lars. Staatliches Museum für Naturkunde Stuttgart; Alemania Fil: Zwick, Andreas. Staatliches Museum für Naturkunde Stuttgart; Alemania Fil: Fikácek, Martin. National Museum; República Checa Fil: Hájek, Jiří. National Museum; República Checa Fil: Michat, Mariano Cruz. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Departamento de Biodiversidad y Biología Experimental; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina Fil: Dietrich, Christopher. University of Illinois; Estados Unidos Fil: la Salle, John. CSIRO Ecosystem Sciences; Australia Fil: Mantle, Beth. CSIRO Ecosystem Sciences; Australia Fil: Ng, Peter K. L.. National University of Singapore; Singapur Fil: Hobern, Donald. GBIF Secretariat; Dinamarca |
description |
Background: Many scientific disciplines rely on correct taxon delineations and identifications. So does a great part of the general public as well as decision makers. Researchers, students and enthusiastic amateurs often feel frustrated because information about species remains scattered, difficult to access, or difficult to decipher. Together, this affects almost anyone who wishes to identify species or verify identifications. Many remedies have been proposed, but we argue that the role of natural history collections remains insufficiently appreciated. We suggest using state-of-the-art mass imaging technology and to join forces to create a global natural history metacollection on the internet, providing access to the morphology of tens of millions of specimens and making them available for automated digital image analysis. Discussion: Robotic high-resolution imaging technology and fast (high performance) computer-based image stitching make it now feasible to digitize entire collection drawers typically used for arthropod collections, or trays or containers used for other objects. Resolutions of 500 megapixels and much higher are already utilized to capture the contents of 40x50 cm collection drawers, providing amazing detail of specimens. Flanked by metadata entry, this helps to create access to tens of thousands of specimens in days. By setting priorities and combining the holdings of the most comprehensive collections for certain taxa, drawer digitizing offers the unique opportunity to create a global, virtual metacollection. The taxonomic and geographic coverage of such a collection could never be achieved by a single institution or individual. We argue that by joining forces, many new impulses will emerge for systematic biology, related fields and understanding of biodiversity in general. Digitizing drawers containing unidentified, little-curated specimens is a contribution towards the beginning of a new era of online curation. It also will help taxonomists and curators to discover and process the millions of “gems” of undescribed species hidden in museum accessions. Summary: Our proposal suggests creating virtual, high-resolution image resources that will, for the first time in history, provide access for expert scientists as well as students and the general public to the enormous wealth of the world’s natural history collections. We foresee that this will contribute to a better understanding, appreciation and increased use of biodiversity resources and the natural history collections serving this cause. |
publishDate |
2013 |
dc.date.none.fl_str_mv |
2013-09 |
dc.type.none.fl_str_mv |
info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion http://purl.org/coar/resource_type/c_6501 info:ar-repo/semantics/articulo |
format |
article |
status_str |
publishedVersion |
dc.identifier.none.fl_str_mv |
http://hdl.handle.net/11336/29067 Balke, Michael; Schmidt, Stefan; Hausmann, Axel; Toussaint, Emmanuel F. A.; Bergsten, Johannes; et al.; Biodiversity into your hands - A call for a virtual global natural history ‘metacollection’ ; Biomed Central; Frontiers In Zoology; 10; 55; 9-2013; 1-9 1742-9994 CONICET Digital CONICET |
url |
http://hdl.handle.net/11336/29067 |
identifier_str_mv |
Balke, Michael; Schmidt, Stefan; Hausmann, Axel; Toussaint, Emmanuel F. A.; Bergsten, Johannes; et al.; Biodiversity into your hands - A call for a virtual global natural history ‘metacollection’ ; Biomed Central; Frontiers In Zoology; 10; 55; 9-2013; 1-9 1742-9994 CONICET Digital CONICET |
dc.language.none.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
info:eu-repo/semantics/altIdentifier/url/https://frontiersinzoology.biomedcentral.com/articles/10.1186/1742-9994-10-55 info:eu-repo/semantics/altIdentifier/doi/10.1186/1742-9994-10-55 |
dc.rights.none.fl_str_mv |
info:eu-repo/semantics/openAccess https://creativecommons.org/licenses/by-nc-sa/2.5/ar/ |
eu_rights_str_mv |
openAccess |
rights_invalid_str_mv |
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/ |
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application/pdf application/pdf |
dc.publisher.none.fl_str_mv |
Biomed Central |
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Biomed Central |
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CONICET Digital (CONICET) |
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Consejo Nacional de Investigaciones Científicas y Técnicas |
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CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas |
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dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar |
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