Biodiversity into your hands - A call for a virtual global natural history ‘metacollection’

Autores
Balke, Michael; Schmidt, Stefan; Hausmann, Axel; Toussaint, Emmanuel F. A.; Bergsten, Johannes; Buffington, Matthew; Häuser, Christoph L.; Kroupa, Alexander; Hagedorn, Gregor; Riedel, Alexander; Polaszek, Andrew; Ubaidillah, Rosichon; Krogmann, Lars; Zwick, Andreas; Fikácek, Martin; Hájek, Jiří; Michat, Mariano Cruz; Dietrich, Christopher; la Salle, John; Mantle, Beth; Ng, Peter K. L.; Hobern, Donald
Año de publicación
2013
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
Background: Many scientific disciplines rely on correct taxon delineations and identifications. So does a great part of the general public as well as decision makers. Researchers, students and enthusiastic amateurs often feel frustrated because information about species remains scattered, difficult to access, or difficult to decipher. Together, this affects almost anyone who wishes to identify species or verify identifications. Many remedies have been proposed, but we argue that the role of natural history collections remains insufficiently appreciated. We suggest using state-of-the-art mass imaging technology and to join forces to create a global natural history metacollection on the internet, providing access to the morphology of tens of millions of specimens and making them available for automated digital image analysis. Discussion: Robotic high-resolution imaging technology and fast (high performance) computer-based image stitching make it now feasible to digitize entire collection drawers typically used for arthropod collections, or trays or containers used for other objects. Resolutions of 500 megapixels and much higher are already utilized to capture the contents of 40x50 cm collection drawers, providing amazing detail of specimens. Flanked by metadata entry, this helps to create access to tens of thousands of specimens in days. By setting priorities and combining the holdings of the most comprehensive collections for certain taxa, drawer digitizing offers the unique opportunity to create a global, virtual metacollection. The taxonomic and geographic coverage of such a collection could never be achieved by a single institution or individual. We argue that by joining forces, many new impulses will emerge for systematic biology, related fields and understanding of biodiversity in general. Digitizing drawers containing unidentified, little-curated specimens is a contribution towards the beginning of a new era of online curation. It also will help taxonomists and curators to discover and process the millions of “gems” of undescribed species hidden in museum accessions. Summary: Our proposal suggests creating virtual, high-resolution image resources that will, for the first time in history, provide access for expert scientists as well as students and the general public to the enormous wealth of the world’s natural history collections. We foresee that this will contribute to a better understanding, appreciation and increased use of biodiversity resources and the natural history collections serving this cause.
Fil: Balke, Michael. Ludwig Maximilians Universitat; Alemania. Zoologische Staatssammlung; Alemania
Fil: Schmidt, Stefan. Zoologische Staatssammlung; Alemania
Fil: Hausmann, Axel. Zoologische Staatssammlung; Alemania
Fil: Toussaint, Emmanuel F. A.. Ludwig Maximilians Universitat; Alemania. Zoologische Staatssammlung; Alemania
Fil: Bergsten, Johannes. Swedish Museum of Natural History; Suecia
Fil: Buffington, Matthew. United States Department of Agriculture. Agricultural Research Service; Estados Unidos
Fil: Häuser, Christoph L.. Museum für Naturkunde; Alemania
Fil: Kroupa, Alexander. Museum für Naturkunde; Alemania
Fil: Hagedorn, Gregor. Museum für Naturkunde; Alemania
Fil: Riedel, Alexander. Staatliches Museum für Naturkunde Karlsruhe; Alemania
Fil: Polaszek, Andrew. Natural History Museum; Reino Unido
Fil: Ubaidillah, Rosichon. Museum Zoologicum Bogoriense; Indonesia
Fil: Krogmann, Lars. Staatliches Museum für Naturkunde Stuttgart; Alemania
Fil: Zwick, Andreas. Staatliches Museum für Naturkunde Stuttgart; Alemania
Fil: Fikácek, Martin. National Museum; República Checa
Fil: Hájek, Jiří. National Museum; República Checa
Fil: Michat, Mariano Cruz. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Departamento de Biodiversidad y Biología Experimental; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina
Fil: Dietrich, Christopher. University of Illinois; Estados Unidos
Fil: la Salle, John. CSIRO Ecosystem Sciences; Australia
Fil: Mantle, Beth. CSIRO Ecosystem Sciences; Australia
Fil: Ng, Peter K. L.. National University of Singapore; Singapur
Fil: Hobern, Donald. GBIF Secretariat; Dinamarca
Materia
MASS DIGITIZATION
NATURAL HISTORY COLLECTIONS
COLLECTION ACCESS
METACOLLECTION
CYBERTAXONOMY
ONLINE RESOURCES
ROBOTIC IMAGING
ACCESSIONS
DNA EXTRACTION VOUCHERS
Nivel de accesibilidad
acceso abierto
Condiciones de uso
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
Repositorio
CONICET Digital (CONICET)
Institución
Consejo Nacional de Investigaciones Científicas y Técnicas
OAI Identificador
oai:ri.conicet.gov.ar:11336/29067

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network_acronym_str CONICETDig
repository_id_str 3498
network_name_str CONICET Digital (CONICET)
spelling Biodiversity into your hands - A call for a virtual global natural history ‘metacollection’Balke, MichaelSchmidt, StefanHausmann, AxelToussaint, Emmanuel F. A.Bergsten, JohannesBuffington, MatthewHäuser, Christoph L.Kroupa, AlexanderHagedorn, GregorRiedel, AlexanderPolaszek, AndrewUbaidillah, RosichonKrogmann, LarsZwick, AndreasFikácek, MartinHájek, JiříMichat, Mariano CruzDietrich, Christopherla Salle, JohnMantle, BethNg, Peter K. L.Hobern, DonaldMASS DIGITIZATIONNATURAL HISTORY COLLECTIONSCOLLECTION ACCESSMETACOLLECTIONCYBERTAXONOMYONLINE RESOURCESROBOTIC IMAGINGACCESSIONSDNA EXTRACTION VOUCHERShttps://purl.org/becyt/ford/1.6https://purl.org/becyt/ford/1Background: Many scientific disciplines rely on correct taxon delineations and identifications. So does a great part of the general public as well as decision makers. Researchers, students and enthusiastic amateurs often feel frustrated because information about species remains scattered, difficult to access, or difficult to decipher. Together, this affects almost anyone who wishes to identify species or verify identifications. Many remedies have been proposed, but we argue that the role of natural history collections remains insufficiently appreciated. We suggest using state-of-the-art mass imaging technology and to join forces to create a global natural history metacollection on the internet, providing access to the morphology of tens of millions of specimens and making them available for automated digital image analysis. Discussion: Robotic high-resolution imaging technology and fast (high performance) computer-based image stitching make it now feasible to digitize entire collection drawers typically used for arthropod collections, or trays or containers used for other objects. Resolutions of 500 megapixels and much higher are already utilized to capture the contents of 40x50 cm collection drawers, providing amazing detail of specimens. Flanked by metadata entry, this helps to create access to tens of thousands of specimens in days. By setting priorities and combining the holdings of the most comprehensive collections for certain taxa, drawer digitizing offers the unique opportunity to create a global, virtual metacollection. The taxonomic and geographic coverage of such a collection could never be achieved by a single institution or individual. We argue that by joining forces, many new impulses will emerge for systematic biology, related fields and understanding of biodiversity in general. Digitizing drawers containing unidentified, little-curated specimens is a contribution towards the beginning of a new era of online curation. It also will help taxonomists and curators to discover and process the millions of “gems” of undescribed species hidden in museum accessions. Summary: Our proposal suggests creating virtual, high-resolution image resources that will, for the first time in history, provide access for expert scientists as well as students and the general public to the enormous wealth of the world’s natural history collections. We foresee that this will contribute to a better understanding, appreciation and increased use of biodiversity resources and the natural history collections serving this cause.Fil: Balke, Michael. Ludwig Maximilians Universitat; Alemania. Zoologische Staatssammlung; AlemaniaFil: Schmidt, Stefan. Zoologische Staatssammlung; AlemaniaFil: Hausmann, Axel. Zoologische Staatssammlung; AlemaniaFil: Toussaint, Emmanuel F. A.. Ludwig Maximilians Universitat; Alemania. Zoologische Staatssammlung; AlemaniaFil: Bergsten, Johannes. Swedish Museum of Natural History; SueciaFil: Buffington, Matthew. United States Department of Agriculture. Agricultural Research Service; Estados UnidosFil: Häuser, Christoph L.. Museum für Naturkunde; AlemaniaFil: Kroupa, Alexander. Museum für Naturkunde; AlemaniaFil: Hagedorn, Gregor. Museum für Naturkunde; AlemaniaFil: Riedel, Alexander. Staatliches Museum für Naturkunde Karlsruhe; AlemaniaFil: Polaszek, Andrew. Natural History Museum; Reino UnidoFil: Ubaidillah, Rosichon. Museum Zoologicum Bogoriense; IndonesiaFil: Krogmann, Lars. Staatliches Museum für Naturkunde Stuttgart; AlemaniaFil: Zwick, Andreas. Staatliches Museum für Naturkunde Stuttgart; AlemaniaFil: Fikácek, Martin. National Museum; República ChecaFil: Hájek, Jiří. National Museum; República ChecaFil: Michat, Mariano Cruz. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Departamento de Biodiversidad y Biología Experimental; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; ArgentinaFil: Dietrich, Christopher. University of Illinois; Estados UnidosFil: la Salle, John. CSIRO Ecosystem Sciences; AustraliaFil: Mantle, Beth. CSIRO Ecosystem Sciences; AustraliaFil: Ng, Peter K. L.. National University of Singapore; SingapurFil: Hobern, Donald. GBIF Secretariat; DinamarcaBiomed Central2013-09info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/29067Balke, Michael; Schmidt, Stefan; Hausmann, Axel; Toussaint, Emmanuel F. A.; Bergsten, Johannes; et al.; Biodiversity into your hands - A call for a virtual global natural history ‘metacollection’ ; Biomed Central; Frontiers In Zoology; 10; 55; 9-2013; 1-91742-9994CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/url/https://frontiersinzoology.biomedcentral.com/articles/10.1186/1742-9994-10-55info:eu-repo/semantics/altIdentifier/doi/10.1186/1742-9994-10-55info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-sa/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-10-15T15:11:42Zoai:ri.conicet.gov.ar:11336/29067instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-10-15 15:11:42.352CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse
dc.title.none.fl_str_mv Biodiversity into your hands - A call for a virtual global natural history ‘metacollection’
title Biodiversity into your hands - A call for a virtual global natural history ‘metacollection’
spellingShingle Biodiversity into your hands - A call for a virtual global natural history ‘metacollection’
Balke, Michael
MASS DIGITIZATION
NATURAL HISTORY COLLECTIONS
COLLECTION ACCESS
METACOLLECTION
CYBERTAXONOMY
ONLINE RESOURCES
ROBOTIC IMAGING
ACCESSIONS
DNA EXTRACTION VOUCHERS
title_short Biodiversity into your hands - A call for a virtual global natural history ‘metacollection’
title_full Biodiversity into your hands - A call for a virtual global natural history ‘metacollection’
title_fullStr Biodiversity into your hands - A call for a virtual global natural history ‘metacollection’
title_full_unstemmed Biodiversity into your hands - A call for a virtual global natural history ‘metacollection’
title_sort Biodiversity into your hands - A call for a virtual global natural history ‘metacollection’
dc.creator.none.fl_str_mv Balke, Michael
Schmidt, Stefan
Hausmann, Axel
Toussaint, Emmanuel F. A.
Bergsten, Johannes
Buffington, Matthew
Häuser, Christoph L.
Kroupa, Alexander
Hagedorn, Gregor
Riedel, Alexander
Polaszek, Andrew
Ubaidillah, Rosichon
Krogmann, Lars
Zwick, Andreas
Fikácek, Martin
Hájek, Jiří
Michat, Mariano Cruz
Dietrich, Christopher
la Salle, John
Mantle, Beth
Ng, Peter K. L.
Hobern, Donald
author Balke, Michael
author_facet Balke, Michael
Schmidt, Stefan
Hausmann, Axel
Toussaint, Emmanuel F. A.
Bergsten, Johannes
Buffington, Matthew
Häuser, Christoph L.
Kroupa, Alexander
Hagedorn, Gregor
Riedel, Alexander
Polaszek, Andrew
Ubaidillah, Rosichon
Krogmann, Lars
Zwick, Andreas
Fikácek, Martin
Hájek, Jiří
Michat, Mariano Cruz
Dietrich, Christopher
la Salle, John
Mantle, Beth
Ng, Peter K. L.
Hobern, Donald
author_role author
author2 Schmidt, Stefan
Hausmann, Axel
Toussaint, Emmanuel F. A.
Bergsten, Johannes
Buffington, Matthew
Häuser, Christoph L.
Kroupa, Alexander
Hagedorn, Gregor
Riedel, Alexander
Polaszek, Andrew
Ubaidillah, Rosichon
Krogmann, Lars
Zwick, Andreas
Fikácek, Martin
Hájek, Jiří
Michat, Mariano Cruz
Dietrich, Christopher
la Salle, John
Mantle, Beth
Ng, Peter K. L.
Hobern, Donald
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.subject.none.fl_str_mv MASS DIGITIZATION
NATURAL HISTORY COLLECTIONS
COLLECTION ACCESS
METACOLLECTION
CYBERTAXONOMY
ONLINE RESOURCES
ROBOTIC IMAGING
ACCESSIONS
DNA EXTRACTION VOUCHERS
topic MASS DIGITIZATION
NATURAL HISTORY COLLECTIONS
COLLECTION ACCESS
METACOLLECTION
CYBERTAXONOMY
ONLINE RESOURCES
ROBOTIC IMAGING
ACCESSIONS
DNA EXTRACTION VOUCHERS
purl_subject.fl_str_mv https://purl.org/becyt/ford/1.6
https://purl.org/becyt/ford/1
dc.description.none.fl_txt_mv Background: Many scientific disciplines rely on correct taxon delineations and identifications. So does a great part of the general public as well as decision makers. Researchers, students and enthusiastic amateurs often feel frustrated because information about species remains scattered, difficult to access, or difficult to decipher. Together, this affects almost anyone who wishes to identify species or verify identifications. Many remedies have been proposed, but we argue that the role of natural history collections remains insufficiently appreciated. We suggest using state-of-the-art mass imaging technology and to join forces to create a global natural history metacollection on the internet, providing access to the morphology of tens of millions of specimens and making them available for automated digital image analysis. Discussion: Robotic high-resolution imaging technology and fast (high performance) computer-based image stitching make it now feasible to digitize entire collection drawers typically used for arthropod collections, or trays or containers used for other objects. Resolutions of 500 megapixels and much higher are already utilized to capture the contents of 40x50 cm collection drawers, providing amazing detail of specimens. Flanked by metadata entry, this helps to create access to tens of thousands of specimens in days. By setting priorities and combining the holdings of the most comprehensive collections for certain taxa, drawer digitizing offers the unique opportunity to create a global, virtual metacollection. The taxonomic and geographic coverage of such a collection could never be achieved by a single institution or individual. We argue that by joining forces, many new impulses will emerge for systematic biology, related fields and understanding of biodiversity in general. Digitizing drawers containing unidentified, little-curated specimens is a contribution towards the beginning of a new era of online curation. It also will help taxonomists and curators to discover and process the millions of “gems” of undescribed species hidden in museum accessions. Summary: Our proposal suggests creating virtual, high-resolution image resources that will, for the first time in history, provide access for expert scientists as well as students and the general public to the enormous wealth of the world’s natural history collections. We foresee that this will contribute to a better understanding, appreciation and increased use of biodiversity resources and the natural history collections serving this cause.
Fil: Balke, Michael. Ludwig Maximilians Universitat; Alemania. Zoologische Staatssammlung; Alemania
Fil: Schmidt, Stefan. Zoologische Staatssammlung; Alemania
Fil: Hausmann, Axel. Zoologische Staatssammlung; Alemania
Fil: Toussaint, Emmanuel F. A.. Ludwig Maximilians Universitat; Alemania. Zoologische Staatssammlung; Alemania
Fil: Bergsten, Johannes. Swedish Museum of Natural History; Suecia
Fil: Buffington, Matthew. United States Department of Agriculture. Agricultural Research Service; Estados Unidos
Fil: Häuser, Christoph L.. Museum für Naturkunde; Alemania
Fil: Kroupa, Alexander. Museum für Naturkunde; Alemania
Fil: Hagedorn, Gregor. Museum für Naturkunde; Alemania
Fil: Riedel, Alexander. Staatliches Museum für Naturkunde Karlsruhe; Alemania
Fil: Polaszek, Andrew. Natural History Museum; Reino Unido
Fil: Ubaidillah, Rosichon. Museum Zoologicum Bogoriense; Indonesia
Fil: Krogmann, Lars. Staatliches Museum für Naturkunde Stuttgart; Alemania
Fil: Zwick, Andreas. Staatliches Museum für Naturkunde Stuttgart; Alemania
Fil: Fikácek, Martin. National Museum; República Checa
Fil: Hájek, Jiří. National Museum; República Checa
Fil: Michat, Mariano Cruz. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Departamento de Biodiversidad y Biología Experimental; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina
Fil: Dietrich, Christopher. University of Illinois; Estados Unidos
Fil: la Salle, John. CSIRO Ecosystem Sciences; Australia
Fil: Mantle, Beth. CSIRO Ecosystem Sciences; Australia
Fil: Ng, Peter K. L.. National University of Singapore; Singapur
Fil: Hobern, Donald. GBIF Secretariat; Dinamarca
description Background: Many scientific disciplines rely on correct taxon delineations and identifications. So does a great part of the general public as well as decision makers. Researchers, students and enthusiastic amateurs often feel frustrated because information about species remains scattered, difficult to access, or difficult to decipher. Together, this affects almost anyone who wishes to identify species or verify identifications. Many remedies have been proposed, but we argue that the role of natural history collections remains insufficiently appreciated. We suggest using state-of-the-art mass imaging technology and to join forces to create a global natural history metacollection on the internet, providing access to the morphology of tens of millions of specimens and making them available for automated digital image analysis. Discussion: Robotic high-resolution imaging technology and fast (high performance) computer-based image stitching make it now feasible to digitize entire collection drawers typically used for arthropod collections, or trays or containers used for other objects. Resolutions of 500 megapixels and much higher are already utilized to capture the contents of 40x50 cm collection drawers, providing amazing detail of specimens. Flanked by metadata entry, this helps to create access to tens of thousands of specimens in days. By setting priorities and combining the holdings of the most comprehensive collections for certain taxa, drawer digitizing offers the unique opportunity to create a global, virtual metacollection. The taxonomic and geographic coverage of such a collection could never be achieved by a single institution or individual. We argue that by joining forces, many new impulses will emerge for systematic biology, related fields and understanding of biodiversity in general. Digitizing drawers containing unidentified, little-curated specimens is a contribution towards the beginning of a new era of online curation. It also will help taxonomists and curators to discover and process the millions of “gems” of undescribed species hidden in museum accessions. Summary: Our proposal suggests creating virtual, high-resolution image resources that will, for the first time in history, provide access for expert scientists as well as students and the general public to the enormous wealth of the world’s natural history collections. We foresee that this will contribute to a better understanding, appreciation and increased use of biodiversity resources and the natural history collections serving this cause.
publishDate 2013
dc.date.none.fl_str_mv 2013-09
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/11336/29067
Balke, Michael; Schmidt, Stefan; Hausmann, Axel; Toussaint, Emmanuel F. A.; Bergsten, Johannes; et al.; Biodiversity into your hands - A call for a virtual global natural history ‘metacollection’ ; Biomed Central; Frontiers In Zoology; 10; 55; 9-2013; 1-9
1742-9994
CONICET Digital
CONICET
url http://hdl.handle.net/11336/29067
identifier_str_mv Balke, Michael; Schmidt, Stefan; Hausmann, Axel; Toussaint, Emmanuel F. A.; Bergsten, Johannes; et al.; Biodiversity into your hands - A call for a virtual global natural history ‘metacollection’ ; Biomed Central; Frontiers In Zoology; 10; 55; 9-2013; 1-9
1742-9994
CONICET Digital
CONICET
dc.language.none.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv info:eu-repo/semantics/altIdentifier/url/https://frontiersinzoology.biomedcentral.com/articles/10.1186/1742-9994-10-55
info:eu-repo/semantics/altIdentifier/doi/10.1186/1742-9994-10-55
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
eu_rights_str_mv openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
dc.format.none.fl_str_mv application/pdf
application/pdf
dc.publisher.none.fl_str_mv Biomed Central
publisher.none.fl_str_mv Biomed Central
dc.source.none.fl_str_mv reponame:CONICET Digital (CONICET)
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reponame_str CONICET Digital (CONICET)
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instname_str Consejo Nacional de Investigaciones Científicas y Técnicas
repository.name.fl_str_mv CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas
repository.mail.fl_str_mv dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar
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