Genomic Population Structure of the Main Historical Genetic Lines of Spanish Merino Sheep

Autores
Granero, Antonio; Anaya, Gabriel; Demyda-peyrás, Sebastian; Alcalde, María Jesús; Arrebola, Francisco; Molina, Antonio
Año de publicación
2022
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
According to historiographical documentation, the Romans first began to select Merino sheep in the Iberian Peninsula during the first century, with the aim of obtaining a breed appreciated for the quality of its wool. This process continued locally during the Middle Ages, when Spanish sheep were protected, and their export to foreign countries was banned. It was during the 16th century when individual Merino sheep were allowed to spread around the world to be used to improve the wool quality of local breeds. However, the wool crisis of the 1960s shifted the selection criteria of the Merino breed towards meat production at the expenses of wool. Consequently, individuals that display the genetic and phenotypic characteristics of those sheep originally bred in the kingdom of Spain in the Middle Ages are extremely difficult to find in commercial herds. In this study, we characterized the genetic basis of 403 individuals from the main historical Spanish Merino genetic lines (Granda, Hidalgo, Lopez-Montenegro, Maeso, Donoso and Egea), which were bred in isolation over the last 200 years, using a genomic approach based on genotyping data from the Axiom™ Ovine 50K SNP Genotyping Array. Our analysis included measuring population structure, genomic differentiation indexes, runs of homozygosity (ROH) patterns, and an analysis of molecular variance (AMOVA). The results showed large genetic differences between the historical lines, even though they belong to the same breed. In addition, ROH analysis showed differences due to increased inbreeding among the ancient generations compared with the modern Merino lines, confirming the breed’s ancestral and closed origin. However, our results also showed a high variability and richness within the Spanish historical Merino lines from a genetic viewpoint. This fact, together with their great ability to produce high-quality wool, suggests that ancestral Merino lines from Spain should be considered a valuable genetic population to be maintained as a resource for the improvement of wool-producing sheep breeds all around the world.
Fil: Granero, Antonio. Asociación Nacional de Criadores de Ganado Merino; España
Fil: Anaya, Gabriel. Universidad de Córdoba; España
Fil: Demyda-peyrás, Sebastian. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina. Universidad Nacional de La Plata; Argentina
Fil: Alcalde, María Jesús. Universidad de Sevilla; España
Fil: Arrebola, Francisco. No especifíca;
Fil: Molina, Antonio. Universidad de Córdoba; España
Materia
GENETIC LINES
GENOMIC CHARACTERIZATION
MERINO
SHEEP
SNPS
Nivel de accesibilidad
acceso abierto
Condiciones de uso
https://creativecommons.org/licenses/by/2.5/ar/
Repositorio
CONICET Digital (CONICET)
Institución
Consejo Nacional de Investigaciones Científicas y Técnicas
OAI Identificador
oai:ri.conicet.gov.ar:11336/200755

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network_name_str CONICET Digital (CONICET)
spelling Genomic Population Structure of the Main Historical Genetic Lines of Spanish Merino SheepGranero, AntonioAnaya, GabrielDemyda-peyrás, SebastianAlcalde, María JesúsArrebola, FranciscoMolina, AntonioGENETIC LINESGENOMIC CHARACTERIZATIONMERINOSHEEPSNPShttps://purl.org/becyt/ford/4.4https://purl.org/becyt/ford/4According to historiographical documentation, the Romans first began to select Merino sheep in the Iberian Peninsula during the first century, with the aim of obtaining a breed appreciated for the quality of its wool. This process continued locally during the Middle Ages, when Spanish sheep were protected, and their export to foreign countries was banned. It was during the 16th century when individual Merino sheep were allowed to spread around the world to be used to improve the wool quality of local breeds. However, the wool crisis of the 1960s shifted the selection criteria of the Merino breed towards meat production at the expenses of wool. Consequently, individuals that display the genetic and phenotypic characteristics of those sheep originally bred in the kingdom of Spain in the Middle Ages are extremely difficult to find in commercial herds. In this study, we characterized the genetic basis of 403 individuals from the main historical Spanish Merino genetic lines (Granda, Hidalgo, Lopez-Montenegro, Maeso, Donoso and Egea), which were bred in isolation over the last 200 years, using a genomic approach based on genotyping data from the Axiom™ Ovine 50K SNP Genotyping Array. Our analysis included measuring population structure, genomic differentiation indexes, runs of homozygosity (ROH) patterns, and an analysis of molecular variance (AMOVA). The results showed large genetic differences between the historical lines, even though they belong to the same breed. In addition, ROH analysis showed differences due to increased inbreeding among the ancient generations compared with the modern Merino lines, confirming the breed’s ancestral and closed origin. However, our results also showed a high variability and richness within the Spanish historical Merino lines from a genetic viewpoint. This fact, together with their great ability to produce high-quality wool, suggests that ancestral Merino lines from Spain should be considered a valuable genetic population to be maintained as a resource for the improvement of wool-producing sheep breeds all around the world.Fil: Granero, Antonio. Asociación Nacional de Criadores de Ganado Merino; EspañaFil: Anaya, Gabriel. Universidad de Córdoba; EspañaFil: Demyda-peyrás, Sebastian. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina. Universidad Nacional de La Plata; ArgentinaFil: Alcalde, María Jesús. Universidad de Sevilla; EspañaFil: Arrebola, Francisco. No especifíca;Fil: Molina, Antonio. Universidad de Córdoba; EspañaMultidisciplinary Digital Publishing Institute2022-05info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/200755Granero, Antonio; Anaya, Gabriel; Demyda-peyrás, Sebastian; Alcalde, María Jesús; Arrebola, Francisco; et al.; Genomic Population Structure of the Main Historical Genetic Lines of Spanish Merino Sheep; Multidisciplinary Digital Publishing Institute; Animals; 12; 10; 5-2022; 1-162076-2615CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/doi/10.3390/ani12101327info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-10-22T11:26:41Zoai:ri.conicet.gov.ar:11336/200755instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-10-22 11:26:42.236CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse
dc.title.none.fl_str_mv Genomic Population Structure of the Main Historical Genetic Lines of Spanish Merino Sheep
title Genomic Population Structure of the Main Historical Genetic Lines of Spanish Merino Sheep
spellingShingle Genomic Population Structure of the Main Historical Genetic Lines of Spanish Merino Sheep
Granero, Antonio
GENETIC LINES
GENOMIC CHARACTERIZATION
MERINO
SHEEP
SNPS
title_short Genomic Population Structure of the Main Historical Genetic Lines of Spanish Merino Sheep
title_full Genomic Population Structure of the Main Historical Genetic Lines of Spanish Merino Sheep
title_fullStr Genomic Population Structure of the Main Historical Genetic Lines of Spanish Merino Sheep
title_full_unstemmed Genomic Population Structure of the Main Historical Genetic Lines of Spanish Merino Sheep
title_sort Genomic Population Structure of the Main Historical Genetic Lines of Spanish Merino Sheep
dc.creator.none.fl_str_mv Granero, Antonio
Anaya, Gabriel
Demyda-peyrás, Sebastian
Alcalde, María Jesús
Arrebola, Francisco
Molina, Antonio
author Granero, Antonio
author_facet Granero, Antonio
Anaya, Gabriel
Demyda-peyrás, Sebastian
Alcalde, María Jesús
Arrebola, Francisco
Molina, Antonio
author_role author
author2 Anaya, Gabriel
Demyda-peyrás, Sebastian
Alcalde, María Jesús
Arrebola, Francisco
Molina, Antonio
author2_role author
author
author
author
author
dc.subject.none.fl_str_mv GENETIC LINES
GENOMIC CHARACTERIZATION
MERINO
SHEEP
SNPS
topic GENETIC LINES
GENOMIC CHARACTERIZATION
MERINO
SHEEP
SNPS
purl_subject.fl_str_mv https://purl.org/becyt/ford/4.4
https://purl.org/becyt/ford/4
dc.description.none.fl_txt_mv According to historiographical documentation, the Romans first began to select Merino sheep in the Iberian Peninsula during the first century, with the aim of obtaining a breed appreciated for the quality of its wool. This process continued locally during the Middle Ages, when Spanish sheep were protected, and their export to foreign countries was banned. It was during the 16th century when individual Merino sheep were allowed to spread around the world to be used to improve the wool quality of local breeds. However, the wool crisis of the 1960s shifted the selection criteria of the Merino breed towards meat production at the expenses of wool. Consequently, individuals that display the genetic and phenotypic characteristics of those sheep originally bred in the kingdom of Spain in the Middle Ages are extremely difficult to find in commercial herds. In this study, we characterized the genetic basis of 403 individuals from the main historical Spanish Merino genetic lines (Granda, Hidalgo, Lopez-Montenegro, Maeso, Donoso and Egea), which were bred in isolation over the last 200 years, using a genomic approach based on genotyping data from the Axiom™ Ovine 50K SNP Genotyping Array. Our analysis included measuring population structure, genomic differentiation indexes, runs of homozygosity (ROH) patterns, and an analysis of molecular variance (AMOVA). The results showed large genetic differences between the historical lines, even though they belong to the same breed. In addition, ROH analysis showed differences due to increased inbreeding among the ancient generations compared with the modern Merino lines, confirming the breed’s ancestral and closed origin. However, our results also showed a high variability and richness within the Spanish historical Merino lines from a genetic viewpoint. This fact, together with their great ability to produce high-quality wool, suggests that ancestral Merino lines from Spain should be considered a valuable genetic population to be maintained as a resource for the improvement of wool-producing sheep breeds all around the world.
Fil: Granero, Antonio. Asociación Nacional de Criadores de Ganado Merino; España
Fil: Anaya, Gabriel. Universidad de Córdoba; España
Fil: Demyda-peyrás, Sebastian. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina. Universidad Nacional de La Plata; Argentina
Fil: Alcalde, María Jesús. Universidad de Sevilla; España
Fil: Arrebola, Francisco. No especifíca;
Fil: Molina, Antonio. Universidad de Córdoba; España
description According to historiographical documentation, the Romans first began to select Merino sheep in the Iberian Peninsula during the first century, with the aim of obtaining a breed appreciated for the quality of its wool. This process continued locally during the Middle Ages, when Spanish sheep were protected, and their export to foreign countries was banned. It was during the 16th century when individual Merino sheep were allowed to spread around the world to be used to improve the wool quality of local breeds. However, the wool crisis of the 1960s shifted the selection criteria of the Merino breed towards meat production at the expenses of wool. Consequently, individuals that display the genetic and phenotypic characteristics of those sheep originally bred in the kingdom of Spain in the Middle Ages are extremely difficult to find in commercial herds. In this study, we characterized the genetic basis of 403 individuals from the main historical Spanish Merino genetic lines (Granda, Hidalgo, Lopez-Montenegro, Maeso, Donoso and Egea), which were bred in isolation over the last 200 years, using a genomic approach based on genotyping data from the Axiom™ Ovine 50K SNP Genotyping Array. Our analysis included measuring population structure, genomic differentiation indexes, runs of homozygosity (ROH) patterns, and an analysis of molecular variance (AMOVA). The results showed large genetic differences between the historical lines, even though they belong to the same breed. In addition, ROH analysis showed differences due to increased inbreeding among the ancient generations compared with the modern Merino lines, confirming the breed’s ancestral and closed origin. However, our results also showed a high variability and richness within the Spanish historical Merino lines from a genetic viewpoint. This fact, together with their great ability to produce high-quality wool, suggests that ancestral Merino lines from Spain should be considered a valuable genetic population to be maintained as a resource for the improvement of wool-producing sheep breeds all around the world.
publishDate 2022
dc.date.none.fl_str_mv 2022-05
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/11336/200755
Granero, Antonio; Anaya, Gabriel; Demyda-peyrás, Sebastian; Alcalde, María Jesús; Arrebola, Francisco; et al.; Genomic Population Structure of the Main Historical Genetic Lines of Spanish Merino Sheep; Multidisciplinary Digital Publishing Institute; Animals; 12; 10; 5-2022; 1-16
2076-2615
CONICET Digital
CONICET
url http://hdl.handle.net/11336/200755
identifier_str_mv Granero, Antonio; Anaya, Gabriel; Demyda-peyrás, Sebastian; Alcalde, María Jesús; Arrebola, Francisco; et al.; Genomic Population Structure of the Main Historical Genetic Lines of Spanish Merino Sheep; Multidisciplinary Digital Publishing Institute; Animals; 12; 10; 5-2022; 1-16
2076-2615
CONICET Digital
CONICET
dc.language.none.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv info:eu-repo/semantics/altIdentifier/doi/10.3390/ani12101327
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
https://creativecommons.org/licenses/by/2.5/ar/
eu_rights_str_mv openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by/2.5/ar/
dc.format.none.fl_str_mv application/pdf
application/pdf
dc.publisher.none.fl_str_mv Multidisciplinary Digital Publishing Institute
publisher.none.fl_str_mv Multidisciplinary Digital Publishing Institute
dc.source.none.fl_str_mv reponame:CONICET Digital (CONICET)
instname:Consejo Nacional de Investigaciones Científicas y Técnicas
reponame_str CONICET Digital (CONICET)
collection CONICET Digital (CONICET)
instname_str Consejo Nacional de Investigaciones Científicas y Técnicas
repository.name.fl_str_mv CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas
repository.mail.fl_str_mv dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar
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