Fungal and bacterial functional groups explain variance in soil nutrient cycling

Autores
Vietorisz, Corinne; Policelli, Nahuel; Li, Abigail; Bhatnagar, Jennifer M.; Adams, Lindsey
Año de publicación
2023
Idioma
inglés
Tipo de recurso
documento de conferencia
Estado
versión publicada
Descripción
Soil microbes are the driving force behind soil nutrient cycling, yet the role of their composition and function in controlling forest nutrient cycling is poorly understood and rarely used to predict rates of biogeochemical cycling. We aimed to answer: 1) Which microbial traits are the best predictors of soil nitrogen (N) and phosphorus (P) cycling rates in temperate forests? 2) What are the relative contributions of microbial, plant, and abiotic traits in explaining rates of soil N and P cycling? We hypothesized that including fungal and bacterial gene abundances would better predict soil N and P cycling than plant traits and abiotic conditions alone. To test this hypothesis, we designed a field system in New England where variation in microbial community composition was crossed with variation in vegetation composition and soil nutrient content. At 6 sites, we sampled soil along a transect from the forest edge to interior from four stand types: pine, hardwood, hardwood with pine saplings in the understory, and mixed mature pine-hardwood. In each sample, we measured net ammonification, nitrification, and phosphate release rates. We performed high-throughput sequencing of fungal and bacterial rDNA amplicons (16S/ITS), used PICRUSt2 to calculate bacterial gene abundances, and used all published fungal genomes to calculate genus-level gene abundances. Abundances of bacterial and fungal genes coding for decomposition of plant litter were positively correlated with net ammonification (bacterial: p = 1.6e-08, R2 = 0.27; fungal: p = 0.006, R2 = 0.09) and phosphate release (fungal: p = 0.002, R2 = 0.23; bacterial: p = 0.03, R2 = 0.17). However, instead of gene abundances, microbial functional guilds were the best predictors of nitrification: N-cycling bacterial abundance positively correlated with nitrification (N cycling: p = 1e-06, R2 = 0.18) and ectomycorrhizal abundance was negatively correlated with nitrification (p = 4e-08, R2 = 0.26). Using model selection, the best linear models to explain nitrification and phosphate release included microbial, plant, and abiotic traits, and for ammonification included microbial and abiotic traits. Our results show that multiple microbial traits are important predictors of soil N and P cycling and should be included in future ecosystem-level biogeochemistry models.
Fil: Vietorisz, Corinne. Boston University; Estados Unidos
Fil: Policelli, Nahuel. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Centro Nacional Patagónico. Instituto Patagónico para el Estudio de los Ecosistemas Continentales; Argentina
Fil: Li, Abigail. Boston University; Estados Unidos
Fil: Bhatnagar, Jennifer M.. Boston University; Estados Unidos
Fil: Adams, Lindsey. Boston University; Estados Unidos
American Geophysical Union 2023 meeting
San Francisco
Estados Unidos
American Geophysical Union
Materia
NITROGEN
CARBON
MICROBIAL COMMUNITY
SOIL
Nivel de accesibilidad
acceso abierto
Condiciones de uso
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
Repositorio
CONICET Digital (CONICET)
Institución
Consejo Nacional de Investigaciones Científicas y Técnicas
OAI Identificador
oai:ri.conicet.gov.ar:11336/228885

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network_name_str CONICET Digital (CONICET)
spelling Fungal and bacterial functional groups explain variance in soil nutrient cyclingVietorisz, CorinnePolicelli, NahuelLi, AbigailBhatnagar, Jennifer M.Adams, LindseyNITROGENCARBONMICROBIAL COMMUNITYSOILhttps://purl.org/becyt/ford/1.6https://purl.org/becyt/ford/1Soil microbes are the driving force behind soil nutrient cycling, yet the role of their composition and function in controlling forest nutrient cycling is poorly understood and rarely used to predict rates of biogeochemical cycling. We aimed to answer: 1) Which microbial traits are the best predictors of soil nitrogen (N) and phosphorus (P) cycling rates in temperate forests? 2) What are the relative contributions of microbial, plant, and abiotic traits in explaining rates of soil N and P cycling? We hypothesized that including fungal and bacterial gene abundances would better predict soil N and P cycling than plant traits and abiotic conditions alone. To test this hypothesis, we designed a field system in New England where variation in microbial community composition was crossed with variation in vegetation composition and soil nutrient content. At 6 sites, we sampled soil along a transect from the forest edge to interior from four stand types: pine, hardwood, hardwood with pine saplings in the understory, and mixed mature pine-hardwood. In each sample, we measured net ammonification, nitrification, and phosphate release rates. We performed high-throughput sequencing of fungal and bacterial rDNA amplicons (16S/ITS), used PICRUSt2 to calculate bacterial gene abundances, and used all published fungal genomes to calculate genus-level gene abundances. Abundances of bacterial and fungal genes coding for decomposition of plant litter were positively correlated with net ammonification (bacterial: p = 1.6e-08, R2 = 0.27; fungal: p = 0.006, R2 = 0.09) and phosphate release (fungal: p = 0.002, R2 = 0.23; bacterial: p = 0.03, R2 = 0.17). However, instead of gene abundances, microbial functional guilds were the best predictors of nitrification: N-cycling bacterial abundance positively correlated with nitrification (N cycling: p = 1e-06, R2 = 0.18) and ectomycorrhizal abundance was negatively correlated with nitrification (p = 4e-08, R2 = 0.26). Using model selection, the best linear models to explain nitrification and phosphate release included microbial, plant, and abiotic traits, and for ammonification included microbial and abiotic traits. Our results show that multiple microbial traits are important predictors of soil N and P cycling and should be included in future ecosystem-level biogeochemistry models.Fil: Vietorisz, Corinne. Boston University; Estados UnidosFil: Policelli, Nahuel. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Centro Nacional Patagónico. Instituto Patagónico para el Estudio de los Ecosistemas Continentales; ArgentinaFil: Li, Abigail. Boston University; Estados UnidosFil: Bhatnagar, Jennifer M.. Boston University; Estados UnidosFil: Adams, Lindsey. Boston University; Estados UnidosAmerican Geophysical Union 2023 meetingSan FranciscoEstados UnidosAmerican Geophysical UnionAmerican Geophysical Union2023info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/conferenceObjectReuniónBookhttp://purl.org/coar/resource_type/c_5794info:ar-repo/semantics/documentoDeConferenciaapplication/pdfapplication/vnd.openxmlformats-officedocument.wordprocessingml.documentapplication/pdfimage/pngapplication/pdfhttp://hdl.handle.net/11336/228885Fungal and bacterial functional groups explain variance in soil nutrient cycling; American Geophysical Union 2023 meeting; San Francisco; Estados Unidos; 2023; 1-2CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/url/https://agu.confex.com/agu/fm23/meetingapp.cgi/Paper/1439269Internacionalinfo:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-sa/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-09-29T09:32:52Zoai:ri.conicet.gov.ar:11336/228885instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-09-29 09:32:52.799CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse
dc.title.none.fl_str_mv Fungal and bacterial functional groups explain variance in soil nutrient cycling
title Fungal and bacterial functional groups explain variance in soil nutrient cycling
spellingShingle Fungal and bacterial functional groups explain variance in soil nutrient cycling
Vietorisz, Corinne
NITROGEN
CARBON
MICROBIAL COMMUNITY
SOIL
title_short Fungal and bacterial functional groups explain variance in soil nutrient cycling
title_full Fungal and bacterial functional groups explain variance in soil nutrient cycling
title_fullStr Fungal and bacterial functional groups explain variance in soil nutrient cycling
title_full_unstemmed Fungal and bacterial functional groups explain variance in soil nutrient cycling
title_sort Fungal and bacterial functional groups explain variance in soil nutrient cycling
dc.creator.none.fl_str_mv Vietorisz, Corinne
Policelli, Nahuel
Li, Abigail
Bhatnagar, Jennifer M.
Adams, Lindsey
author Vietorisz, Corinne
author_facet Vietorisz, Corinne
Policelli, Nahuel
Li, Abigail
Bhatnagar, Jennifer M.
Adams, Lindsey
author_role author
author2 Policelli, Nahuel
Li, Abigail
Bhatnagar, Jennifer M.
Adams, Lindsey
author2_role author
author
author
author
dc.subject.none.fl_str_mv NITROGEN
CARBON
MICROBIAL COMMUNITY
SOIL
topic NITROGEN
CARBON
MICROBIAL COMMUNITY
SOIL
purl_subject.fl_str_mv https://purl.org/becyt/ford/1.6
https://purl.org/becyt/ford/1
dc.description.none.fl_txt_mv Soil microbes are the driving force behind soil nutrient cycling, yet the role of their composition and function in controlling forest nutrient cycling is poorly understood and rarely used to predict rates of biogeochemical cycling. We aimed to answer: 1) Which microbial traits are the best predictors of soil nitrogen (N) and phosphorus (P) cycling rates in temperate forests? 2) What are the relative contributions of microbial, plant, and abiotic traits in explaining rates of soil N and P cycling? We hypothesized that including fungal and bacterial gene abundances would better predict soil N and P cycling than plant traits and abiotic conditions alone. To test this hypothesis, we designed a field system in New England where variation in microbial community composition was crossed with variation in vegetation composition and soil nutrient content. At 6 sites, we sampled soil along a transect from the forest edge to interior from four stand types: pine, hardwood, hardwood with pine saplings in the understory, and mixed mature pine-hardwood. In each sample, we measured net ammonification, nitrification, and phosphate release rates. We performed high-throughput sequencing of fungal and bacterial rDNA amplicons (16S/ITS), used PICRUSt2 to calculate bacterial gene abundances, and used all published fungal genomes to calculate genus-level gene abundances. Abundances of bacterial and fungal genes coding for decomposition of plant litter were positively correlated with net ammonification (bacterial: p = 1.6e-08, R2 = 0.27; fungal: p = 0.006, R2 = 0.09) and phosphate release (fungal: p = 0.002, R2 = 0.23; bacterial: p = 0.03, R2 = 0.17). However, instead of gene abundances, microbial functional guilds were the best predictors of nitrification: N-cycling bacterial abundance positively correlated with nitrification (N cycling: p = 1e-06, R2 = 0.18) and ectomycorrhizal abundance was negatively correlated with nitrification (p = 4e-08, R2 = 0.26). Using model selection, the best linear models to explain nitrification and phosphate release included microbial, plant, and abiotic traits, and for ammonification included microbial and abiotic traits. Our results show that multiple microbial traits are important predictors of soil N and P cycling and should be included in future ecosystem-level biogeochemistry models.
Fil: Vietorisz, Corinne. Boston University; Estados Unidos
Fil: Policelli, Nahuel. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Centro Nacional Patagónico. Instituto Patagónico para el Estudio de los Ecosistemas Continentales; Argentina
Fil: Li, Abigail. Boston University; Estados Unidos
Fil: Bhatnagar, Jennifer M.. Boston University; Estados Unidos
Fil: Adams, Lindsey. Boston University; Estados Unidos
American Geophysical Union 2023 meeting
San Francisco
Estados Unidos
American Geophysical Union
description Soil microbes are the driving force behind soil nutrient cycling, yet the role of their composition and function in controlling forest nutrient cycling is poorly understood and rarely used to predict rates of biogeochemical cycling. We aimed to answer: 1) Which microbial traits are the best predictors of soil nitrogen (N) and phosphorus (P) cycling rates in temperate forests? 2) What are the relative contributions of microbial, plant, and abiotic traits in explaining rates of soil N and P cycling? We hypothesized that including fungal and bacterial gene abundances would better predict soil N and P cycling than plant traits and abiotic conditions alone. To test this hypothesis, we designed a field system in New England where variation in microbial community composition was crossed with variation in vegetation composition and soil nutrient content. At 6 sites, we sampled soil along a transect from the forest edge to interior from four stand types: pine, hardwood, hardwood with pine saplings in the understory, and mixed mature pine-hardwood. In each sample, we measured net ammonification, nitrification, and phosphate release rates. We performed high-throughput sequencing of fungal and bacterial rDNA amplicons (16S/ITS), used PICRUSt2 to calculate bacterial gene abundances, and used all published fungal genomes to calculate genus-level gene abundances. Abundances of bacterial and fungal genes coding for decomposition of plant litter were positively correlated with net ammonification (bacterial: p = 1.6e-08, R2 = 0.27; fungal: p = 0.006, R2 = 0.09) and phosphate release (fungal: p = 0.002, R2 = 0.23; bacterial: p = 0.03, R2 = 0.17). However, instead of gene abundances, microbial functional guilds were the best predictors of nitrification: N-cycling bacterial abundance positively correlated with nitrification (N cycling: p = 1e-06, R2 = 0.18) and ectomycorrhizal abundance was negatively correlated with nitrification (p = 4e-08, R2 = 0.26). Using model selection, the best linear models to explain nitrification and phosphate release included microbial, plant, and abiotic traits, and for ammonification included microbial and abiotic traits. Our results show that multiple microbial traits are important predictors of soil N and P cycling and should be included in future ecosystem-level biogeochemistry models.
publishDate 2023
dc.date.none.fl_str_mv 2023
dc.type.none.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/conferenceObject
Reunión
Book
http://purl.org/coar/resource_type/c_5794
info:ar-repo/semantics/documentoDeConferencia
status_str publishedVersion
format conferenceObject
dc.identifier.none.fl_str_mv http://hdl.handle.net/11336/228885
Fungal and bacterial functional groups explain variance in soil nutrient cycling; American Geophysical Union 2023 meeting; San Francisco; Estados Unidos; 2023; 1-2
CONICET Digital
CONICET
url http://hdl.handle.net/11336/228885
identifier_str_mv Fungal and bacterial functional groups explain variance in soil nutrient cycling; American Geophysical Union 2023 meeting; San Francisco; Estados Unidos; 2023; 1-2
CONICET Digital
CONICET
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language eng
dc.relation.none.fl_str_mv info:eu-repo/semantics/altIdentifier/url/https://agu.confex.com/agu/fm23/meetingapp.cgi/Paper/1439269
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https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
eu_rights_str_mv openAccess
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dc.coverage.none.fl_str_mv Internacional
dc.publisher.none.fl_str_mv American Geophysical Union
publisher.none.fl_str_mv American Geophysical Union
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reponame_str CONICET Digital (CONICET)
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