RDAVIDWebService: a versatile R interface to DAVID

Autores
Fresno Rodríguez, Cristóbal; Fernandez, Elmer Andres
Año de publicación
2013
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
The RDAVIDWebService package provides a class-based interface from R programs/scripts to fully access/control the database for annotation, visualization and integrated discovery, without the need for human interaction on its Web site (http://david.abcc.ncifcrf.gov). The library enhances the database for annotation, visualization and integrated discovery capabilities for Gene Ontology analysis by means of GOstats-based direct acyclic graph conversion methods, in addition to the usual many-genes-to-many-terms visualization.
Fil: Fresno Rodríguez, Cristóbal. Universidad Católica de Córdoba; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina
Fil: Fernandez, Elmer Andres. Universidad Católica de Córdoba; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina
Materia
Gene Expression
Functional Genomics
Gene Ontology
Visualization
Nivel de accesibilidad
acceso abierto
Condiciones de uso
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
Repositorio
CONICET Digital (CONICET)
Institución
Consejo Nacional de Investigaciones Científicas y Técnicas
OAI Identificador
oai:ri.conicet.gov.ar:11336/23542
Acceder
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oai_identifier_str oai:ri.conicet.gov.ar:11336/23542
network_acronym_str CONICETDig
repository_id_str 3498
network_name_str CONICET Digital (CONICET)
spelling RDAVIDWebService: a versatile R interface to DAVIDFresno Rodríguez, CristóbalFernandez, Elmer AndresGene ExpressionFunctional GenomicsGene OntologyVisualizationhttps://purl.org/becyt/ford/1.2https://purl.org/becyt/ford/1The RDAVIDWebService package provides a class-based interface from R programs/scripts to fully access/control the database for annotation, visualization and integrated discovery, without the need for human interaction on its Web site (http://david.abcc.ncifcrf.gov). The library enhances the database for annotation, visualization and integrated discovery capabilities for Gene Ontology analysis by means of GOstats-based direct acyclic graph conversion methods, in addition to the usual many-genes-to-many-terms visualization.Fil: Fresno Rodríguez, Cristóbal. Universidad Católica de Córdoba; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; ArgentinaFil: Fernandez, Elmer Andres. Universidad Católica de Córdoba; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; ArgentinaOxford University Press2013-08info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/23542Fresno Rodríguez, Cristóbal; Fernandez, Elmer Andres; RDAVIDWebService: a versatile R interface to DAVID; Oxford University Press; Bioinformatics (Oxford, England); 29; 21; 8-2013; 2810-28111367-48031460-2059CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/doi/10.1093/bioinformatics/btt487info:eu-repo/semantics/altIdentifier/url/https://academic.oup.com/bioinformatics/article-lookup/doi/10.1093/bioinformatics/btt487info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-sa/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-11-05T10:16:44Zoai:ri.conicet.gov.ar:11336/23542instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-11-05 10:16:44.751CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse
dc.title.none.fl_str_mv RDAVIDWebService: a versatile R interface to DAVID
title RDAVIDWebService: a versatile R interface to DAVID
spellingShingle RDAVIDWebService: a versatile R interface to DAVID
Fresno Rodríguez, Cristóbal
Gene Expression
Functional Genomics
Gene Ontology
Visualization
title_short RDAVIDWebService: a versatile R interface to DAVID
title_full RDAVIDWebService: a versatile R interface to DAVID
title_fullStr RDAVIDWebService: a versatile R interface to DAVID
title_full_unstemmed RDAVIDWebService: a versatile R interface to DAVID
title_sort RDAVIDWebService: a versatile R interface to DAVID
dc.creator.none.fl_str_mv Fresno Rodríguez, Cristóbal
Fernandez, Elmer Andres
author Fresno Rodríguez, Cristóbal
author_facet Fresno Rodríguez, Cristóbal
Fernandez, Elmer Andres
author_role author
author2 Fernandez, Elmer Andres
author2_role author
dc.subject.none.fl_str_mv Gene Expression
Functional Genomics
Gene Ontology
Visualization
topic Gene Expression
Functional Genomics
Gene Ontology
Visualization
purl_subject.fl_str_mv https://purl.org/becyt/ford/1.2
https://purl.org/becyt/ford/1
dc.description.none.fl_txt_mv The RDAVIDWebService package provides a class-based interface from R programs/scripts to fully access/control the database for annotation, visualization and integrated discovery, without the need for human interaction on its Web site (http://david.abcc.ncifcrf.gov). The library enhances the database for annotation, visualization and integrated discovery capabilities for Gene Ontology analysis by means of GOstats-based direct acyclic graph conversion methods, in addition to the usual many-genes-to-many-terms visualization.
Fil: Fresno Rodríguez, Cristóbal. Universidad Católica de Córdoba; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina
Fil: Fernandez, Elmer Andres. Universidad Católica de Córdoba; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina
description The RDAVIDWebService package provides a class-based interface from R programs/scripts to fully access/control the database for annotation, visualization and integrated discovery, without the need for human interaction on its Web site (http://david.abcc.ncifcrf.gov). The library enhances the database for annotation, visualization and integrated discovery capabilities for Gene Ontology analysis by means of GOstats-based direct acyclic graph conversion methods, in addition to the usual many-genes-to-many-terms visualization.
publishDate 2013
dc.date.none.fl_str_mv 2013-08
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/11336/23542
Fresno Rodríguez, Cristóbal; Fernandez, Elmer Andres; RDAVIDWebService: a versatile R interface to DAVID; Oxford University Press; Bioinformatics (Oxford, England); 29; 21; 8-2013; 2810-2811
1367-4803
1460-2059
CONICET Digital
CONICET
url http://hdl.handle.net/11336/23542
identifier_str_mv Fresno Rodríguez, Cristóbal; Fernandez, Elmer Andres; RDAVIDWebService: a versatile R interface to DAVID; Oxford University Press; Bioinformatics (Oxford, England); 29; 21; 8-2013; 2810-2811
1367-4803
1460-2059
CONICET Digital
CONICET
dc.language.none.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv info:eu-repo/semantics/altIdentifier/doi/10.1093/bioinformatics/btt487
info:eu-repo/semantics/altIdentifier/url/https://academic.oup.com/bioinformatics/article-lookup/doi/10.1093/bioinformatics/btt487
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
eu_rights_str_mv openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
dc.format.none.fl_str_mv application/pdf
application/pdf
dc.publisher.none.fl_str_mv Oxford University Press
publisher.none.fl_str_mv Oxford University Press
dc.source.none.fl_str_mv reponame:CONICET Digital (CONICET)
instname:Consejo Nacional de Investigaciones Científicas y Técnicas
reponame_str CONICET Digital (CONICET)
collection CONICET Digital (CONICET)
instname_str Consejo Nacional de Investigaciones Científicas y Técnicas
repository.name.fl_str_mv CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas
repository.mail.fl_str_mv dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar
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score 13.087074

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