A conceptual framework for nomenclatural stability and validity of medically important fungi: a proposed global consensus guideline for fungal name changes supported by ABP, ASM, C...
- Autores
- de Hoog, Sybren; Walsh, Thomas J.; Ahmed, Sarah A.; Alastruey Izquierdo, Ana; Alexander, Barbara D.; Cavling Arendrup, Maiken; Babady, Esther; Bai, Feng Yan; Balada Llasat, Joan Miquel; Borman, Andrew; Chowdhary, Anuradha; Clark, Andrew; Colgrove, Robert C.; Cornely, Oliver A.; Dingle, Tanis C.; Dufresne, Philippe J.; Fuller, Jeff; Gangneux, Jean Pierre; Gibas, Connie; Heather Glasgow; Gräser, Yvonne; Guillot, Jacques; Groll, Andreas H.; Haase, Gerhard; Vitale, Roxana Gabriela; Westblade, Lars; Wiederhold, Nathan; White, Lewis; Wojewoda, Christina M.; Zhang, Sean X.
- Año de publicación
- 2023
- Idioma
- inglés
- Tipo de recurso
- artículo
- Estado
- versión publicada
- Descripción
- The rapid pace of name changes of medically important fungi is creating challenges for clinical laboratories and clinicians involved in patient care. We describe two sources of name change which have different drivers, at the species versus the genus level. Some suggestions are made here to reduce the number of name changes. We urge taxonomists to provide diagnostic markers of taxonomic novelties. Given the instability of phylogenetic trees due to variable taxon sampling, we advocate to maintain genera at the largest possible size. Reporting of identified species in complexes or series should where possible comprise both the name of the overarching species and that of the molecular sibling, often cryptic species. Because the use of different names for the same species will be unavoidable for many years to come, an open access online database of the names of all medically important fungi, with proper nomenclatural designation and synonymy, is essential. We further recommend that while taxonomic discovery continues, the adaptation of new name changes by clinical laboratories and clinicians be reviewed routinely by a standing committee for validation and stability over time, with reference to an open access database, wherein reasons for changes are listed in a transparent way.
Fil: de Hoog, Sybren. Radboud University Medical Center; Países Bajos. Foundation Atlas of Clinical Fungi; Países Bajos. Peking University First Hospital; China. Universidade Federal do Paraná; Brasil
Fil: Walsh, Thomas J.. International Society for Human and Animal Mycology; Estados Unidos. University of Maryland; Estados Unidos. Center for Innovative Therapeutics and Diagnostics; Estados Unidos. International Mycological Association; Estados Unidos. Mycoses Study Group, Education and Research Consortium; Estados Unidos
Fil: Ahmed, Sarah A.. Radboudumc-CWZ Centre of Expertise for Mycology; Países Bajos. International Society for Human and Animal Mycology; Estados Unidos. Foundation Atlas of Clinical Fungi; Países Bajos
Fil: Alastruey Izquierdo, Ana. International Society for Human and Animal Mycology; Estados Unidos. Spanish National Centre for Microbiology; España. Fungal Infection Study Group, European Society of Clinical Microbiology and Infectious Diseases; Suiza
Fil: Alexander, Barbara D.. Duke University; Estados Unidos. Fungal Diagnostics Laboratory Consortium; Estados Unidos
Fil: Cavling Arendrup, Maiken. Copenhagen University Hospital Rigshospitalet; Dinamarca. European Committee of Antimicrobial Susceptibility Testing; Dinamarca
Fil: Babady, Esther. Fungal Diagnostics Laboratory Consortium; Estados Unidos. Memorial Sloan Kettering Cancer Cente; Estados Unidos. Asia Pacific Society for Medical Mycology; China
Fil: Bai, Feng Yan. Chinese Academy of Sciences; República de China. Mycology Committee of Chinese Society for Microbiology; Estados Unidos
Fil: Balada Llasat, Joan Miquel. Fungal Diagnostics Laboratory Consortium; Estados Unidos. Ohio State University; Estados Unidos
Fil: Borman, Andrew. Public Health England; Reino Unido
Fil: Chowdhary, Anuradha. European Society of Clinical Microbiology and Infectious Diseases; Estados Unidos. University of Delhi; India
Fil: Clark, Andrew. University of Texas; Estados Unidos. Fungal Diagnostics Laboratory Consortium; Estados Unidos
Fil: Colgrove, Robert C.. Infectious Diseases Society of America; Estados Unidos. Mount Auburn Hospital; Estados Unidos
Fil: Cornely, Oliver A.. European Confederation of Medical Mycology; Suiza. Fungal Infection Study Group, European Society of Clinical Microbiology and Infectious Diseases ; Suiza. University of Cologne; Alemania
Fil: Dingle, Tanis C.. Institut National de Santé Publique du Québec; Canadá. Clinical and Laboratory Standards Institute; Canadá. Fungal Diagnostics Laboratory Consortium; Canadá
Fil: Dufresne, Philippe J.. Fungal Diagnostics Laboratory Consortium; Canadá. Institut National de Santé Publique du Québec; Canadá. Clinical and Laboratory Standards Institute; Canadá
Fil: Fuller, Jeff. Fungal Diagnostics Laboratory Consortium; Reino Unido. London Health Sciences Center; Reino Unido
Fil: Gangneux, Jean Pierre. Universite de Rennes I; Francia. European Confederation of Medical Mycology; Francia
Fil: Gibas, Connie. University of Texas; Estados Unidos
Fil: Heather Glasgow. Fungal Diagnostics Laboratory Consortium; Estados Unidos. St. Jude Children’s Research Hospital; Estados Unidos
Fil: Gräser, Yvonne. Humboldt University; Alemania
Fil: Guillot, Jacques. l'Alimentation Nantes-Atlantique; Francia
Fil: Groll, Andreas H.. University Children’s Hospital; Alemania. Fungal Infection Study Group, European Society of Clinical Microbiology and Infectious Diseases; Suiza
Fil: Haase, Gerhard. RWTH Aachen University Hospital; Alemania
Fil: Vitale, Roxana Gabriela. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina. Gobierno de la Ciudad de Buenos Aires. Hospital General de Agudos "Ramos Mejía"; Argentina
Fil: Westblade, Lars. Fungal Diagnostics Laboratory Consortium; Estados Unidos. Weill Cornell Medical College; Estados Unidos
Fil: Wiederhold, Nathan. Fungal Diagnostics Laboratory Consortium; Estados Unidos. Mycoses Study Group, Education and Research Consortium; Estados Unidos. University of Texas; Estados Unidos. Clinical and Laboratory Standards Institute; Estados Unidos. Medical Mycological Society of the Americas; Estados Unidos
Fil: White, Lewis. Public Health Wales Microbiology; Reino Unido
Fil: Wojewoda, Christina M.. University of Vermont Medical Center; Estados Unidos
Fil: Zhang, Sean X.. University Johns Hopkins; Estados Unidos. International Society for Human and Animal Mycology; Estados Unidos. Fungal Diagnostics Laboratory Consortium; Estados Unidos - Materia
-
NOMENCLATURE
MEDICAL IMPORTANT FUNGI
CONSENSUS GUIDELINES - Nivel de accesibilidad
- acceso abierto
- Condiciones de uso
- https://creativecommons.org/licenses/by/2.5/ar/
- Repositorio
- Institución
- Consejo Nacional de Investigaciones Científicas y Técnicas
- OAI Identificador
- oai:ri.conicet.gov.ar:11336/235535
Ver los metadatos del registro completo
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A conceptual framework for nomenclatural stability and validity of medically important fungi: a proposed global consensus guideline for fungal name changes supported by ABP, ASM, CLSI, ECMM, ESCMID-EFISG, EUCAST-AFST, FDLC, IDSA, ISHAM, MMSA, and MSGERCde Hoog, SybrenWalsh, Thomas J.Ahmed, Sarah A.Alastruey Izquierdo, AnaAlexander, Barbara D.Cavling Arendrup, MaikenBabady, EstherBai, Feng YanBalada Llasat, Joan MiquelBorman, AndrewChowdhary, AnuradhaClark, AndrewColgrove, Robert C.Cornely, Oliver A.Dingle, Tanis C.Dufresne, Philippe J.Fuller, JeffGangneux, Jean PierreGibas, ConnieHeather GlasgowGräser, YvonneGuillot, JacquesGroll, Andreas H.Haase, GerhardVitale, Roxana GabrielaWestblade, LarsWiederhold, NathanWhite, LewisWojewoda, Christina M.Zhang, Sean X.NOMENCLATUREMEDICAL IMPORTANT FUNGICONSENSUS GUIDELINEShttps://purl.org/becyt/ford/3.3https://purl.org/becyt/ford/3The rapid pace of name changes of medically important fungi is creating challenges for clinical laboratories and clinicians involved in patient care. We describe two sources of name change which have different drivers, at the species versus the genus level. Some suggestions are made here to reduce the number of name changes. We urge taxonomists to provide diagnostic markers of taxonomic novelties. Given the instability of phylogenetic trees due to variable taxon sampling, we advocate to maintain genera at the largest possible size. Reporting of identified species in complexes or series should where possible comprise both the name of the overarching species and that of the molecular sibling, often cryptic species. Because the use of different names for the same species will be unavoidable for many years to come, an open access online database of the names of all medically important fungi, with proper nomenclatural designation and synonymy, is essential. We further recommend that while taxonomic discovery continues, the adaptation of new name changes by clinical laboratories and clinicians be reviewed routinely by a standing committee for validation and stability over time, with reference to an open access database, wherein reasons for changes are listed in a transparent way.Fil: de Hoog, Sybren. Radboud University Medical Center; Países Bajos. Foundation Atlas of Clinical Fungi; Países Bajos. Peking University First Hospital; China. Universidade Federal do Paraná; BrasilFil: Walsh, Thomas J.. International Society for Human and Animal Mycology; Estados Unidos. University of Maryland; Estados Unidos. Center for Innovative Therapeutics and Diagnostics; Estados Unidos. International Mycological Association; Estados Unidos. Mycoses Study Group, Education and Research Consortium; Estados UnidosFil: Ahmed, Sarah A.. Radboudumc-CWZ Centre of Expertise for Mycology; Países Bajos. International Society for Human and Animal Mycology; Estados Unidos. Foundation Atlas of Clinical Fungi; Países BajosFil: Alastruey Izquierdo, Ana. International Society for Human and Animal Mycology; Estados Unidos. Spanish National Centre for Microbiology; España. Fungal Infection Study Group, European Society of Clinical Microbiology and Infectious Diseases; SuizaFil: Alexander, Barbara D.. Duke University; Estados Unidos. Fungal Diagnostics Laboratory Consortium; Estados UnidosFil: Cavling Arendrup, Maiken. Copenhagen University Hospital Rigshospitalet; Dinamarca. European Committee of Antimicrobial Susceptibility Testing; DinamarcaFil: Babady, Esther. Fungal Diagnostics Laboratory Consortium; Estados Unidos. Memorial Sloan Kettering Cancer Cente; Estados Unidos. Asia Pacific Society for Medical Mycology; ChinaFil: Bai, Feng Yan. Chinese Academy of Sciences; República de China. Mycology Committee of Chinese Society for Microbiology; Estados UnidosFil: Balada Llasat, Joan Miquel. Fungal Diagnostics Laboratory Consortium; Estados Unidos. Ohio State University; Estados UnidosFil: Borman, Andrew. Public Health England; Reino UnidoFil: Chowdhary, Anuradha. European Society of Clinical Microbiology and Infectious Diseases; Estados Unidos. University of Delhi; IndiaFil: Clark, Andrew. University of Texas; Estados Unidos. Fungal Diagnostics Laboratory Consortium; Estados UnidosFil: Colgrove, Robert C.. Infectious Diseases Society of America; Estados Unidos. Mount Auburn Hospital; Estados UnidosFil: Cornely, Oliver A.. European Confederation of Medical Mycology; Suiza. Fungal Infection Study Group, European Society of Clinical Microbiology and Infectious Diseases ; Suiza. University of Cologne; AlemaniaFil: Dingle, Tanis C.. Institut National de Santé Publique du Québec; Canadá. Clinical and Laboratory Standards Institute; Canadá. Fungal Diagnostics Laboratory Consortium; CanadáFil: Dufresne, Philippe J.. Fungal Diagnostics Laboratory Consortium; Canadá. Institut National de Santé Publique du Québec; Canadá. Clinical and Laboratory Standards Institute; CanadáFil: Fuller, Jeff. Fungal Diagnostics Laboratory Consortium; Reino Unido. London Health Sciences Center; Reino UnidoFil: Gangneux, Jean Pierre. Universite de Rennes I; Francia. European Confederation of Medical Mycology; FranciaFil: Gibas, Connie. University of Texas; Estados UnidosFil: Heather Glasgow. Fungal Diagnostics Laboratory Consortium; Estados Unidos. St. Jude Children’s Research Hospital; Estados UnidosFil: Gräser, Yvonne. Humboldt University; AlemaniaFil: Guillot, Jacques. l'Alimentation Nantes-Atlantique; FranciaFil: Groll, Andreas H.. University Children’s Hospital; Alemania. Fungal Infection Study Group, European Society of Clinical Microbiology and Infectious Diseases; SuizaFil: Haase, Gerhard. RWTH Aachen University Hospital; AlemaniaFil: Vitale, Roxana Gabriela. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina. Gobierno de la Ciudad de Buenos Aires. Hospital General de Agudos "Ramos Mejía"; ArgentinaFil: Westblade, Lars. Fungal Diagnostics Laboratory Consortium; Estados Unidos. Weill Cornell Medical College; Estados UnidosFil: Wiederhold, Nathan. Fungal Diagnostics Laboratory Consortium; Estados Unidos. Mycoses Study Group, Education and Research Consortium; Estados Unidos. University of Texas; Estados Unidos. Clinical and Laboratory Standards Institute; Estados Unidos. Medical Mycological Society of the Americas; Estados UnidosFil: White, Lewis. Public Health Wales Microbiology; Reino UnidoFil: Wojewoda, Christina M.. University of Vermont Medical Center; Estados UnidosFil: Zhang, Sean X.. University Johns Hopkins; Estados Unidos. International Society for Human and Animal Mycology; Estados Unidos. Fungal Diagnostics Laboratory Consortium; Estados UnidosAmerican Society for Microbiology2023-05info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/235535de Hoog, Sybren; Walsh, Thomas J.; Ahmed, Sarah A.; Alastruey Izquierdo, Ana; Alexander, Barbara D.; et al.; A conceptual framework for nomenclatural stability and validity of medically important fungi: a proposed global consensus guideline for fungal name changes supported by ABP, ASM, CLSI, ECMM, ESCMID-EFISG, EUCAST-AFST, FDLC, IDSA, ISHAM, MMSA, and MSGERC; American Society for Microbiology; Journal of Clinical Microbiology; 61; 11; 5-2023; 1-210095-1137CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/url/https://journals.asm.org/doi/10.1128/jcm.00873-23info:eu-repo/semantics/altIdentifier/doi/10.1128/jcm.00873-23info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-09-03T09:54:23Zoai:ri.conicet.gov.ar:11336/235535instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-09-03 09:54:24.075CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse |
dc.title.none.fl_str_mv |
A conceptual framework for nomenclatural stability and validity of medically important fungi: a proposed global consensus guideline for fungal name changes supported by ABP, ASM, CLSI, ECMM, ESCMID-EFISG, EUCAST-AFST, FDLC, IDSA, ISHAM, MMSA, and MSGERC |
title |
A conceptual framework for nomenclatural stability and validity of medically important fungi: a proposed global consensus guideline for fungal name changes supported by ABP, ASM, CLSI, ECMM, ESCMID-EFISG, EUCAST-AFST, FDLC, IDSA, ISHAM, MMSA, and MSGERC |
spellingShingle |
A conceptual framework for nomenclatural stability and validity of medically important fungi: a proposed global consensus guideline for fungal name changes supported by ABP, ASM, CLSI, ECMM, ESCMID-EFISG, EUCAST-AFST, FDLC, IDSA, ISHAM, MMSA, and MSGERC de Hoog, Sybren NOMENCLATURE MEDICAL IMPORTANT FUNGI CONSENSUS GUIDELINES |
title_short |
A conceptual framework for nomenclatural stability and validity of medically important fungi: a proposed global consensus guideline for fungal name changes supported by ABP, ASM, CLSI, ECMM, ESCMID-EFISG, EUCAST-AFST, FDLC, IDSA, ISHAM, MMSA, and MSGERC |
title_full |
A conceptual framework for nomenclatural stability and validity of medically important fungi: a proposed global consensus guideline for fungal name changes supported by ABP, ASM, CLSI, ECMM, ESCMID-EFISG, EUCAST-AFST, FDLC, IDSA, ISHAM, MMSA, and MSGERC |
title_fullStr |
A conceptual framework for nomenclatural stability and validity of medically important fungi: a proposed global consensus guideline for fungal name changes supported by ABP, ASM, CLSI, ECMM, ESCMID-EFISG, EUCAST-AFST, FDLC, IDSA, ISHAM, MMSA, and MSGERC |
title_full_unstemmed |
A conceptual framework for nomenclatural stability and validity of medically important fungi: a proposed global consensus guideline for fungal name changes supported by ABP, ASM, CLSI, ECMM, ESCMID-EFISG, EUCAST-AFST, FDLC, IDSA, ISHAM, MMSA, and MSGERC |
title_sort |
A conceptual framework for nomenclatural stability and validity of medically important fungi: a proposed global consensus guideline for fungal name changes supported by ABP, ASM, CLSI, ECMM, ESCMID-EFISG, EUCAST-AFST, FDLC, IDSA, ISHAM, MMSA, and MSGERC |
dc.creator.none.fl_str_mv |
de Hoog, Sybren Walsh, Thomas J. Ahmed, Sarah A. Alastruey Izquierdo, Ana Alexander, Barbara D. Cavling Arendrup, Maiken Babady, Esther Bai, Feng Yan Balada Llasat, Joan Miquel Borman, Andrew Chowdhary, Anuradha Clark, Andrew Colgrove, Robert C. Cornely, Oliver A. Dingle, Tanis C. Dufresne, Philippe J. Fuller, Jeff Gangneux, Jean Pierre Gibas, Connie Heather Glasgow Gräser, Yvonne Guillot, Jacques Groll, Andreas H. Haase, Gerhard Vitale, Roxana Gabriela Westblade, Lars Wiederhold, Nathan White, Lewis Wojewoda, Christina M. Zhang, Sean X. |
author |
de Hoog, Sybren |
author_facet |
de Hoog, Sybren Walsh, Thomas J. Ahmed, Sarah A. Alastruey Izquierdo, Ana Alexander, Barbara D. Cavling Arendrup, Maiken Babady, Esther Bai, Feng Yan Balada Llasat, Joan Miquel Borman, Andrew Chowdhary, Anuradha Clark, Andrew Colgrove, Robert C. Cornely, Oliver A. Dingle, Tanis C. Dufresne, Philippe J. Fuller, Jeff Gangneux, Jean Pierre Gibas, Connie Heather Glasgow Gräser, Yvonne Guillot, Jacques Groll, Andreas H. Haase, Gerhard Vitale, Roxana Gabriela Westblade, Lars Wiederhold, Nathan White, Lewis Wojewoda, Christina M. Zhang, Sean X. |
author_role |
author |
author2 |
Walsh, Thomas J. Ahmed, Sarah A. Alastruey Izquierdo, Ana Alexander, Barbara D. Cavling Arendrup, Maiken Babady, Esther Bai, Feng Yan Balada Llasat, Joan Miquel Borman, Andrew Chowdhary, Anuradha Clark, Andrew Colgrove, Robert C. Cornely, Oliver A. Dingle, Tanis C. Dufresne, Philippe J. Fuller, Jeff Gangneux, Jean Pierre Gibas, Connie Heather Glasgow Gräser, Yvonne Guillot, Jacques Groll, Andreas H. Haase, Gerhard Vitale, Roxana Gabriela Westblade, Lars Wiederhold, Nathan White, Lewis Wojewoda, Christina M. Zhang, Sean X. |
author2_role |
author author author author author author author author author author author author author author author author author author author author author author author author author author author author author |
dc.subject.none.fl_str_mv |
NOMENCLATURE MEDICAL IMPORTANT FUNGI CONSENSUS GUIDELINES |
topic |
NOMENCLATURE MEDICAL IMPORTANT FUNGI CONSENSUS GUIDELINES |
purl_subject.fl_str_mv |
https://purl.org/becyt/ford/3.3 https://purl.org/becyt/ford/3 |
dc.description.none.fl_txt_mv |
The rapid pace of name changes of medically important fungi is creating challenges for clinical laboratories and clinicians involved in patient care. We describe two sources of name change which have different drivers, at the species versus the genus level. Some suggestions are made here to reduce the number of name changes. We urge taxonomists to provide diagnostic markers of taxonomic novelties. Given the instability of phylogenetic trees due to variable taxon sampling, we advocate to maintain genera at the largest possible size. Reporting of identified species in complexes or series should where possible comprise both the name of the overarching species and that of the molecular sibling, often cryptic species. Because the use of different names for the same species will be unavoidable for many years to come, an open access online database of the names of all medically important fungi, with proper nomenclatural designation and synonymy, is essential. We further recommend that while taxonomic discovery continues, the adaptation of new name changes by clinical laboratories and clinicians be reviewed routinely by a standing committee for validation and stability over time, with reference to an open access database, wherein reasons for changes are listed in a transparent way. Fil: de Hoog, Sybren. Radboud University Medical Center; Países Bajos. Foundation Atlas of Clinical Fungi; Países Bajos. Peking University First Hospital; China. Universidade Federal do Paraná; Brasil Fil: Walsh, Thomas J.. International Society for Human and Animal Mycology; Estados Unidos. University of Maryland; Estados Unidos. Center for Innovative Therapeutics and Diagnostics; Estados Unidos. International Mycological Association; Estados Unidos. Mycoses Study Group, Education and Research Consortium; Estados Unidos Fil: Ahmed, Sarah A.. Radboudumc-CWZ Centre of Expertise for Mycology; Países Bajos. International Society for Human and Animal Mycology; Estados Unidos. Foundation Atlas of Clinical Fungi; Países Bajos Fil: Alastruey Izquierdo, Ana. International Society for Human and Animal Mycology; Estados Unidos. Spanish National Centre for Microbiology; España. Fungal Infection Study Group, European Society of Clinical Microbiology and Infectious Diseases; Suiza Fil: Alexander, Barbara D.. Duke University; Estados Unidos. Fungal Diagnostics Laboratory Consortium; Estados Unidos Fil: Cavling Arendrup, Maiken. Copenhagen University Hospital Rigshospitalet; Dinamarca. European Committee of Antimicrobial Susceptibility Testing; Dinamarca Fil: Babady, Esther. Fungal Diagnostics Laboratory Consortium; Estados Unidos. Memorial Sloan Kettering Cancer Cente; Estados Unidos. Asia Pacific Society for Medical Mycology; China Fil: Bai, Feng Yan. Chinese Academy of Sciences; República de China. Mycology Committee of Chinese Society for Microbiology; Estados Unidos Fil: Balada Llasat, Joan Miquel. Fungal Diagnostics Laboratory Consortium; Estados Unidos. Ohio State University; Estados Unidos Fil: Borman, Andrew. Public Health England; Reino Unido Fil: Chowdhary, Anuradha. European Society of Clinical Microbiology and Infectious Diseases; Estados Unidos. University of Delhi; India Fil: Clark, Andrew. University of Texas; Estados Unidos. Fungal Diagnostics Laboratory Consortium; Estados Unidos Fil: Colgrove, Robert C.. Infectious Diseases Society of America; Estados Unidos. Mount Auburn Hospital; Estados Unidos Fil: Cornely, Oliver A.. European Confederation of Medical Mycology; Suiza. Fungal Infection Study Group, European Society of Clinical Microbiology and Infectious Diseases ; Suiza. University of Cologne; Alemania Fil: Dingle, Tanis C.. Institut National de Santé Publique du Québec; Canadá. Clinical and Laboratory Standards Institute; Canadá. Fungal Diagnostics Laboratory Consortium; Canadá Fil: Dufresne, Philippe J.. Fungal Diagnostics Laboratory Consortium; Canadá. Institut National de Santé Publique du Québec; Canadá. Clinical and Laboratory Standards Institute; Canadá Fil: Fuller, Jeff. Fungal Diagnostics Laboratory Consortium; Reino Unido. London Health Sciences Center; Reino Unido Fil: Gangneux, Jean Pierre. Universite de Rennes I; Francia. European Confederation of Medical Mycology; Francia Fil: Gibas, Connie. University of Texas; Estados Unidos Fil: Heather Glasgow. Fungal Diagnostics Laboratory Consortium; Estados Unidos. St. Jude Children’s Research Hospital; Estados Unidos Fil: Gräser, Yvonne. Humboldt University; Alemania Fil: Guillot, Jacques. l'Alimentation Nantes-Atlantique; Francia Fil: Groll, Andreas H.. University Children’s Hospital; Alemania. Fungal Infection Study Group, European Society of Clinical Microbiology and Infectious Diseases; Suiza Fil: Haase, Gerhard. RWTH Aachen University Hospital; Alemania Fil: Vitale, Roxana Gabriela. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina. Gobierno de la Ciudad de Buenos Aires. Hospital General de Agudos "Ramos Mejía"; Argentina Fil: Westblade, Lars. Fungal Diagnostics Laboratory Consortium; Estados Unidos. Weill Cornell Medical College; Estados Unidos Fil: Wiederhold, Nathan. Fungal Diagnostics Laboratory Consortium; Estados Unidos. Mycoses Study Group, Education and Research Consortium; Estados Unidos. University of Texas; Estados Unidos. Clinical and Laboratory Standards Institute; Estados Unidos. Medical Mycological Society of the Americas; Estados Unidos Fil: White, Lewis. Public Health Wales Microbiology; Reino Unido Fil: Wojewoda, Christina M.. University of Vermont Medical Center; Estados Unidos Fil: Zhang, Sean X.. University Johns Hopkins; Estados Unidos. International Society for Human and Animal Mycology; Estados Unidos. Fungal Diagnostics Laboratory Consortium; Estados Unidos |
description |
The rapid pace of name changes of medically important fungi is creating challenges for clinical laboratories and clinicians involved in patient care. We describe two sources of name change which have different drivers, at the species versus the genus level. Some suggestions are made here to reduce the number of name changes. We urge taxonomists to provide diagnostic markers of taxonomic novelties. Given the instability of phylogenetic trees due to variable taxon sampling, we advocate to maintain genera at the largest possible size. Reporting of identified species in complexes or series should where possible comprise both the name of the overarching species and that of the molecular sibling, often cryptic species. Because the use of different names for the same species will be unavoidable for many years to come, an open access online database of the names of all medically important fungi, with proper nomenclatural designation and synonymy, is essential. We further recommend that while taxonomic discovery continues, the adaptation of new name changes by clinical laboratories and clinicians be reviewed routinely by a standing committee for validation and stability over time, with reference to an open access database, wherein reasons for changes are listed in a transparent way. |
publishDate |
2023 |
dc.date.none.fl_str_mv |
2023-05 |
dc.type.none.fl_str_mv |
info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion http://purl.org/coar/resource_type/c_6501 info:ar-repo/semantics/articulo |
format |
article |
status_str |
publishedVersion |
dc.identifier.none.fl_str_mv |
http://hdl.handle.net/11336/235535 de Hoog, Sybren; Walsh, Thomas J.; Ahmed, Sarah A.; Alastruey Izquierdo, Ana; Alexander, Barbara D.; et al.; A conceptual framework for nomenclatural stability and validity of medically important fungi: a proposed global consensus guideline for fungal name changes supported by ABP, ASM, CLSI, ECMM, ESCMID-EFISG, EUCAST-AFST, FDLC, IDSA, ISHAM, MMSA, and MSGERC; American Society for Microbiology; Journal of Clinical Microbiology; 61; 11; 5-2023; 1-21 0095-1137 CONICET Digital CONICET |
url |
http://hdl.handle.net/11336/235535 |
identifier_str_mv |
de Hoog, Sybren; Walsh, Thomas J.; Ahmed, Sarah A.; Alastruey Izquierdo, Ana; Alexander, Barbara D.; et al.; A conceptual framework for nomenclatural stability and validity of medically important fungi: a proposed global consensus guideline for fungal name changes supported by ABP, ASM, CLSI, ECMM, ESCMID-EFISG, EUCAST-AFST, FDLC, IDSA, ISHAM, MMSA, and MSGERC; American Society for Microbiology; Journal of Clinical Microbiology; 61; 11; 5-2023; 1-21 0095-1137 CONICET Digital CONICET |
dc.language.none.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
info:eu-repo/semantics/altIdentifier/url/https://journals.asm.org/doi/10.1128/jcm.00873-23 info:eu-repo/semantics/altIdentifier/doi/10.1128/jcm.00873-23 |
dc.rights.none.fl_str_mv |
info:eu-repo/semantics/openAccess https://creativecommons.org/licenses/by/2.5/ar/ |
eu_rights_str_mv |
openAccess |
rights_invalid_str_mv |
https://creativecommons.org/licenses/by/2.5/ar/ |
dc.format.none.fl_str_mv |
application/pdf application/pdf |
dc.publisher.none.fl_str_mv |
American Society for Microbiology |
publisher.none.fl_str_mv |
American Society for Microbiology |
dc.source.none.fl_str_mv |
reponame:CONICET Digital (CONICET) instname:Consejo Nacional de Investigaciones Científicas y Técnicas |
reponame_str |
CONICET Digital (CONICET) |
collection |
CONICET Digital (CONICET) |
instname_str |
Consejo Nacional de Investigaciones Científicas y Técnicas |
repository.name.fl_str_mv |
CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas |
repository.mail.fl_str_mv |
dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar |
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1842269283845931008 |
score |
13.13397 |