Development of a C. cardunculus linkage map based on SRAP, SSR, SNP markers and localization of phenotypic traits

Autores
Martin, Eugenia Alejandra; Acquaviva, Esteban Julian; Cravero, Vanina Pamela; Portis, Ezio; Scaglione, Davide; Lanteri, Sergio; Cointry Peix, Enrique Luis
Año de publicación
2013
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
In order to develop a new linkage map of C. cardunculus L., an F1 mapping population was generated from an intraspecific cross between a local genotype of wild cardoon and the globe artichoke "Estrella del Sur FCA". The population was genotyped using a combination of molecular markers and 3 phenotypic traits. A total of 421 segregating loci were identified. The female parent map (988.09 cM) consisted in 127 loci, spread over 15 linkage groups (LGs), while the male one (578.2 cM) resulted in 112 loci, distributed in 10 major LGs. The alignment between the female and male maps, by using intercross markers, allowed to determine 17 major LGs. The phenotypic traits "Color Head" and "Spine Leaf" were included in the wild cardoon map, whereas "Spine Head" was positioned on the LG7 globe artichoke map. The presence of 48 loci in common between the present maps and the previously developed SSR-based linkage maps of the Cynara cardunculus species, allowed the alignment of the LGs. The developed maps represent important tools for the localization of interesting agronomic traits as well as for molecular-assisted breeding strategies and will be useful for the construction of an integrated map and for comparative genetics analysis.
Fil: Martin, Eugenia Alejandra. Universidad Nacional de Rosario. Facultad de Ciencias Agrarias; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Rosario; Argentina
Fil: Acquaviva, Esteban Julian. Universidad Nacional de Rosario. Facultad de Ciencias Agrarias. Departamento de Producción Vegetal. Cátedra de Mejoramiento Vegetal y Producción de Semillas; Argentina
Fil: Cravero, Vanina Pamela. Universidad Nacional de Rosario. Facultad de Ciencias Agrarias; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Rosario; Argentina
Fil: Portis, Ezio. Università di Torino; Italia
Fil: Scaglione, Davide. Università di Torino; Italia
Fil: Lanteri, Sergio. Università di Torino; Italia
Fil: Cointry Peix, Enrique Luis. Universidad Nacional de Rosario. Facultad de Ciencias Agrarias. Departamento de Producción Vegetal. Cátedra de Mejoramiento Vegetal y Producción de Semillas; Argentina
Materia
LINKAGE MAP
MOLECULAR MAKERS
CYNARA CARDUNCULUS L.
PHENOTYPIC TRAITS
Nivel de accesibilidad
acceso abierto
Condiciones de uso
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
Repositorio
CONICET Digital (CONICET)
Institución
Consejo Nacional de Investigaciones Científicas y Técnicas
OAI Identificador
oai:ri.conicet.gov.ar:11336/98952
Acceder
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oai_identifier_str oai:ri.conicet.gov.ar:11336/98952
network_acronym_str CONICETDig
repository_id_str 3498
network_name_str CONICET Digital (CONICET)
spelling Development of a C. cardunculus linkage map based on SRAP, SSR, SNP markers and localization of phenotypic traitsMartin, Eugenia AlejandraAcquaviva, Esteban JulianCravero, Vanina PamelaPortis, EzioScaglione, DavideLanteri, SergioCointry Peix, Enrique LuisLINKAGE MAPMOLECULAR MAKERSCYNARA CARDUNCULUS L.PHENOTYPIC TRAITShttps://purl.org/becyt/ford/4.4https://purl.org/becyt/ford/4In order to develop a new linkage map of C. cardunculus L., an F1 mapping population was generated from an intraspecific cross between a local genotype of wild cardoon and the globe artichoke "Estrella del Sur FCA". The population was genotyped using a combination of molecular markers and 3 phenotypic traits. A total of 421 segregating loci were identified. The female parent map (988.09 cM) consisted in 127 loci, spread over 15 linkage groups (LGs), while the male one (578.2 cM) resulted in 112 loci, distributed in 10 major LGs. The alignment between the female and male maps, by using intercross markers, allowed to determine 17 major LGs. The phenotypic traits "Color Head" and "Spine Leaf" were included in the wild cardoon map, whereas "Spine Head" was positioned on the LG7 globe artichoke map. The presence of 48 loci in common between the present maps and the previously developed SSR-based linkage maps of the Cynara cardunculus species, allowed the alignment of the LGs. The developed maps represent important tools for the localization of interesting agronomic traits as well as for molecular-assisted breeding strategies and will be useful for the construction of an integrated map and for comparative genetics analysis.Fil: Martin, Eugenia Alejandra. Universidad Nacional de Rosario. Facultad de Ciencias Agrarias; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Rosario; ArgentinaFil: Acquaviva, Esteban Julian. Universidad Nacional de Rosario. Facultad de Ciencias Agrarias. Departamento de Producción Vegetal. Cátedra de Mejoramiento Vegetal y Producción de Semillas; ArgentinaFil: Cravero, Vanina Pamela. Universidad Nacional de Rosario. Facultad de Ciencias Agrarias; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Rosario; ArgentinaFil: Portis, Ezio. Università di Torino; ItaliaFil: Scaglione, Davide. Università di Torino; ItaliaFil: Lanteri, Sergio. Università di Torino; ItaliaFil: Cointry Peix, Enrique Luis. Universidad Nacional de Rosario. Facultad de Ciencias Agrarias. Departamento de Producción Vegetal. Cátedra de Mejoramiento Vegetal y Producción de Semillas; ArgentinaInternational Society for Horticultural Science2013-04info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/98952Martin, Eugenia Alejandra; Acquaviva, Esteban Julian; Cravero, Vanina Pamela; Portis, Ezio; Scaglione, Davide; et al.; Development of a C. cardunculus linkage map based on SRAP, SSR, SNP markers and localization of phenotypic traits; International Society for Horticultural Science; Acta Horticulturae; 983; 4-2013; 139-1430567-7572CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/doi/10.17660/ActaHortic.2013.983.18info:eu-repo/semantics/altIdentifier/url/https://www.ishs.org/ishs-article/983_18info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-sa/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-09-29T09:51:58Zoai:ri.conicet.gov.ar:11336/98952instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-09-29 09:51:58.331CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse
dc.title.none.fl_str_mv Development of a C. cardunculus linkage map based on SRAP, SSR, SNP markers and localization of phenotypic traits
title Development of a C. cardunculus linkage map based on SRAP, SSR, SNP markers and localization of phenotypic traits
spellingShingle Development of a C. cardunculus linkage map based on SRAP, SSR, SNP markers and localization of phenotypic traits
Martin, Eugenia Alejandra
LINKAGE MAP
MOLECULAR MAKERS
CYNARA CARDUNCULUS L.
PHENOTYPIC TRAITS
title_short Development of a C. cardunculus linkage map based on SRAP, SSR, SNP markers and localization of phenotypic traits
title_full Development of a C. cardunculus linkage map based on SRAP, SSR, SNP markers and localization of phenotypic traits
title_fullStr Development of a C. cardunculus linkage map based on SRAP, SSR, SNP markers and localization of phenotypic traits
title_full_unstemmed Development of a C. cardunculus linkage map based on SRAP, SSR, SNP markers and localization of phenotypic traits
title_sort Development of a C. cardunculus linkage map based on SRAP, SSR, SNP markers and localization of phenotypic traits
dc.creator.none.fl_str_mv Martin, Eugenia Alejandra
Acquaviva, Esteban Julian
Cravero, Vanina Pamela
Portis, Ezio
Scaglione, Davide
Lanteri, Sergio
Cointry Peix, Enrique Luis
author Martin, Eugenia Alejandra
author_facet Martin, Eugenia Alejandra
Acquaviva, Esteban Julian
Cravero, Vanina Pamela
Portis, Ezio
Scaglione, Davide
Lanteri, Sergio
Cointry Peix, Enrique Luis
author_role author
author2 Acquaviva, Esteban Julian
Cravero, Vanina Pamela
Portis, Ezio
Scaglione, Davide
Lanteri, Sergio
Cointry Peix, Enrique Luis
author2_role author
author
author
author
author
author
dc.subject.none.fl_str_mv LINKAGE MAP
MOLECULAR MAKERS
CYNARA CARDUNCULUS L.
PHENOTYPIC TRAITS
topic LINKAGE MAP
MOLECULAR MAKERS
CYNARA CARDUNCULUS L.
PHENOTYPIC TRAITS
purl_subject.fl_str_mv https://purl.org/becyt/ford/4.4
https://purl.org/becyt/ford/4
dc.description.none.fl_txt_mv In order to develop a new linkage map of C. cardunculus L., an F1 mapping population was generated from an intraspecific cross between a local genotype of wild cardoon and the globe artichoke "Estrella del Sur FCA". The population was genotyped using a combination of molecular markers and 3 phenotypic traits. A total of 421 segregating loci were identified. The female parent map (988.09 cM) consisted in 127 loci, spread over 15 linkage groups (LGs), while the male one (578.2 cM) resulted in 112 loci, distributed in 10 major LGs. The alignment between the female and male maps, by using intercross markers, allowed to determine 17 major LGs. The phenotypic traits "Color Head" and "Spine Leaf" were included in the wild cardoon map, whereas "Spine Head" was positioned on the LG7 globe artichoke map. The presence of 48 loci in common between the present maps and the previously developed SSR-based linkage maps of the Cynara cardunculus species, allowed the alignment of the LGs. The developed maps represent important tools for the localization of interesting agronomic traits as well as for molecular-assisted breeding strategies and will be useful for the construction of an integrated map and for comparative genetics analysis.
Fil: Martin, Eugenia Alejandra. Universidad Nacional de Rosario. Facultad de Ciencias Agrarias; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Rosario; Argentina
Fil: Acquaviva, Esteban Julian. Universidad Nacional de Rosario. Facultad de Ciencias Agrarias. Departamento de Producción Vegetal. Cátedra de Mejoramiento Vegetal y Producción de Semillas; Argentina
Fil: Cravero, Vanina Pamela. Universidad Nacional de Rosario. Facultad de Ciencias Agrarias; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Rosario; Argentina
Fil: Portis, Ezio. Università di Torino; Italia
Fil: Scaglione, Davide. Università di Torino; Italia
Fil: Lanteri, Sergio. Università di Torino; Italia
Fil: Cointry Peix, Enrique Luis. Universidad Nacional de Rosario. Facultad de Ciencias Agrarias. Departamento de Producción Vegetal. Cátedra de Mejoramiento Vegetal y Producción de Semillas; Argentina
description In order to develop a new linkage map of C. cardunculus L., an F1 mapping population was generated from an intraspecific cross between a local genotype of wild cardoon and the globe artichoke "Estrella del Sur FCA". The population was genotyped using a combination of molecular markers and 3 phenotypic traits. A total of 421 segregating loci were identified. The female parent map (988.09 cM) consisted in 127 loci, spread over 15 linkage groups (LGs), while the male one (578.2 cM) resulted in 112 loci, distributed in 10 major LGs. The alignment between the female and male maps, by using intercross markers, allowed to determine 17 major LGs. The phenotypic traits "Color Head" and "Spine Leaf" were included in the wild cardoon map, whereas "Spine Head" was positioned on the LG7 globe artichoke map. The presence of 48 loci in common between the present maps and the previously developed SSR-based linkage maps of the Cynara cardunculus species, allowed the alignment of the LGs. The developed maps represent important tools for the localization of interesting agronomic traits as well as for molecular-assisted breeding strategies and will be useful for the construction of an integrated map and for comparative genetics analysis.
publishDate 2013
dc.date.none.fl_str_mv 2013-04
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/11336/98952
Martin, Eugenia Alejandra; Acquaviva, Esteban Julian; Cravero, Vanina Pamela; Portis, Ezio; Scaglione, Davide; et al.; Development of a C. cardunculus linkage map based on SRAP, SSR, SNP markers and localization of phenotypic traits; International Society for Horticultural Science; Acta Horticulturae; 983; 4-2013; 139-143
0567-7572
CONICET Digital
CONICET
url http://hdl.handle.net/11336/98952
identifier_str_mv Martin, Eugenia Alejandra; Acquaviva, Esteban Julian; Cravero, Vanina Pamela; Portis, Ezio; Scaglione, Davide; et al.; Development of a C. cardunculus linkage map based on SRAP, SSR, SNP markers and localization of phenotypic traits; International Society for Horticultural Science; Acta Horticulturae; 983; 4-2013; 139-143
0567-7572
CONICET Digital
CONICET
dc.language.none.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv info:eu-repo/semantics/altIdentifier/doi/10.17660/ActaHortic.2013.983.18
info:eu-repo/semantics/altIdentifier/url/https://www.ishs.org/ishs-article/983_18
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
eu_rights_str_mv openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
dc.format.none.fl_str_mv application/pdf
application/pdf
application/pdf
dc.publisher.none.fl_str_mv International Society for Horticultural Science
publisher.none.fl_str_mv International Society for Horticultural Science
dc.source.none.fl_str_mv reponame:CONICET Digital (CONICET)
instname:Consejo Nacional de Investigaciones Científicas y Técnicas
reponame_str CONICET Digital (CONICET)
collection CONICET Digital (CONICET)
instname_str Consejo Nacional de Investigaciones Científicas y Técnicas
repository.name.fl_str_mv CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas
repository.mail.fl_str_mv dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar
_version_ 1844613595695939584
score 13.070432

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