Application of fluorescent in-situ hybridization in the evaluation of the biocides used in the oil industry

Autores
Terada, Claudia Gabriela; del Panno, Maria Teresa; Viera, Marisa Rosana
Año de publicación
2015
Idioma
inglés
Tipo de recurso
documento de conferencia
Estado
versión publicada
Descripción
Microbiologically influenced corrosion (MIC) and souring of oilfield reservoirs as result of the presence of sulfate-reducingbacteria (SRB) are of great concern in the oil industry. Considering the limitations of conventional culture-based methods forstudying SRB, techniques involving the direct analysis of the microbial population from their genetic material are getting moreattention. One of them is Fluorescent in situ Hybridization (FISH), which uses fluorescently labeled oligonucleotide probes thathybridizes specifically to its complementary 16S rRNA target sequence within the intact cell. Using FISH, the abundance of thedetected microorganisms can be determined by counting the cells stained with a general DNA-binding dye and the cellshybridized with a specific probe. To control bacterial populations, biocides are commonly applied to injection waters andproduction facilities. The aim of this work was to evaluate the possibility of using FISH to help in the selection of an appropriatebiocide for the water treatment plant of an oil secondary recovery plant (OSRP). Three commercial biocides based on THPS andquaternary ammonium salts were used in the assay in a concentration of 200mg/l. Three replicates of each biocide in eachconcentration were done. The following probes (5P end-labeled with Cy3) were used: Eub338; Non338 and SRB385. Thefluorescence was detected with a Leica microscope, analyzing 15 to 20 images per sample. The inhibition effect of the biocideswas tested in OSRP water filtered inoculated with a microbial culture in PostagteB medium, obtained from the same water. Theinhibitory effect was determined by counting the cells hybridized with the Eub338 and SRB385 probes. The percentage ofhybridized vs DAPI-stained cells, RS%, was calculated. The RS% values for the Eub338 probe obtained after 4h of incubationat60ºC(water treatment plant condition) in the presence of biocides B1 and B3 were higher than those obtained with the control(without biocide). This behavior suggested a metabolic activation, associated with a high content of RNA in the cells. It could berelated with the mode of action of the chemicals or the application of a sub lethal dose. The RS% values obtained with B2 wereno significantly different from those of the control, associated with no inhibitory effect. The RS% values obtained after 4h ofincubation for SRB population showed that none of the tested biocides produced metabolic activation. B1 and B3 biocidal effectswere not different from that observed in the control. Instead, the lower RS% values obtained with B2 were associated with asignificant inhibitory effect on SRB population, showing that the SRB population was more sensitive to B2 effect under the testedcondition. These results suggested that FISH could be helpful in the screening of biocides, being a responsive and suitable testto detected inhibitory concentrations.
Fil: Terada, Claudia Gabriela. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - La Plata. Centro de Investigación y Desarrollo en Fermentaciones Industriales. Universidad Nacional de La Plata. Facultad de Ciencias Exactas. Centro de Investigación y Desarrollo en Fermentaciones Industriales; Argentina
Fil: del Panno, Maria Teresa. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - La Plata. Centro de Investigación y Desarrollo en Fermentaciones Industriales. Universidad Nacional de La Plata. Facultad de Ciencias Exactas. Centro de Investigación y Desarrollo en Fermentaciones Industriales; Argentina
Fil: Viera, Marisa Rosana. Provincia de Buenos Aires. Gobernación. Comisión de Investigaciones Científicas. Centro de Investigaciones en Tecnología de Pinturas. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - La Plata. Centro de Investigaciones en Tecnología de Pinturas; Argentina
XI Congreso de Microbiología General
Argentina
Sociedad Argentina de Microbiología General
Materia
Microbiologically Influenced Corrosion
Oil field reservoirs
Sulphate reducing bacteria
Fluorescent in-situ hybridization
Nivel de accesibilidad
acceso abierto
Condiciones de uso
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
Repositorio
CONICET Digital (CONICET)
Institución
Consejo Nacional de Investigaciones Científicas y Técnicas
OAI Identificador
oai:ri.conicet.gov.ar:11336/239083

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network_acronym_str CONICETDig
repository_id_str 3498
network_name_str CONICET Digital (CONICET)
spelling Application of fluorescent in-situ hybridization in the evaluation of the biocides used in the oil industryTerada, Claudia Gabrieladel Panno, Maria TeresaViera, Marisa RosanaMicrobiologically Influenced CorrosionOil field reservoirsSulphate reducing bacteriaFluorescent in-situ hybridizationhttps://purl.org/becyt/ford/2.8https://purl.org/becyt/ford/2Microbiologically influenced corrosion (MIC) and souring of oilfield reservoirs as result of the presence of sulfate-reducingbacteria (SRB) are of great concern in the oil industry. Considering the limitations of conventional culture-based methods forstudying SRB, techniques involving the direct analysis of the microbial population from their genetic material are getting moreattention. One of them is Fluorescent in situ Hybridization (FISH), which uses fluorescently labeled oligonucleotide probes thathybridizes specifically to its complementary 16S rRNA target sequence within the intact cell. Using FISH, the abundance of thedetected microorganisms can be determined by counting the cells stained with a general DNA-binding dye and the cellshybridized with a specific probe. To control bacterial populations, biocides are commonly applied to injection waters andproduction facilities. The aim of this work was to evaluate the possibility of using FISH to help in the selection of an appropriatebiocide for the water treatment plant of an oil secondary recovery plant (OSRP). Three commercial biocides based on THPS andquaternary ammonium salts were used in the assay in a concentration of 200mg/l. Three replicates of each biocide in eachconcentration were done. The following probes (5P end-labeled with Cy3) were used: Eub338; Non338 and SRB385. Thefluorescence was detected with a Leica microscope, analyzing 15 to 20 images per sample. The inhibition effect of the biocideswas tested in OSRP water filtered inoculated with a microbial culture in PostagteB medium, obtained from the same water. Theinhibitory effect was determined by counting the cells hybridized with the Eub338 and SRB385 probes. The percentage ofhybridized vs DAPI-stained cells, RS%, was calculated. The RS% values for the Eub338 probe obtained after 4h of incubationat60ºC(water treatment plant condition) in the presence of biocides B1 and B3 were higher than those obtained with the control(without biocide). This behavior suggested a metabolic activation, associated with a high content of RNA in the cells. It could berelated with the mode of action of the chemicals or the application of a sub lethal dose. The RS% values obtained with B2 wereno significantly different from those of the control, associated with no inhibitory effect. The RS% values obtained after 4h ofincubation for SRB population showed that none of the tested biocides produced metabolic activation. B1 and B3 biocidal effectswere not different from that observed in the control. Instead, the lower RS% values obtained with B2 were associated with asignificant inhibitory effect on SRB population, showing that the SRB population was more sensitive to B2 effect under the testedcondition. These results suggested that FISH could be helpful in the screening of biocides, being a responsive and suitable testto detected inhibitory concentrations.Fil: Terada, Claudia Gabriela. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - La Plata. Centro de Investigación y Desarrollo en Fermentaciones Industriales. Universidad Nacional de La Plata. Facultad de Ciencias Exactas. Centro de Investigación y Desarrollo en Fermentaciones Industriales; ArgentinaFil: del Panno, Maria Teresa. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - La Plata. Centro de Investigación y Desarrollo en Fermentaciones Industriales. Universidad Nacional de La Plata. Facultad de Ciencias Exactas. Centro de Investigación y Desarrollo en Fermentaciones Industriales; ArgentinaFil: Viera, Marisa Rosana. Provincia de Buenos Aires. Gobernación. Comisión de Investigaciones Científicas. Centro de Investigaciones en Tecnología de Pinturas. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - La Plata. Centro de Investigaciones en Tecnología de Pinturas; ArgentinaXI Congreso de Microbiología GeneralArgentinaSociedad Argentina de Microbiología GeneralSociedad Argentina de Microbiología General2015info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/conferenceObjectCongresoBookhttp://purl.org/coar/resource_type/c_5794info:ar-repo/semantics/documentoDeConferenciaapplication/pdfapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/239083Application of fluorescent in-situ hybridization in the evaluation of the biocides used in the oil industry; XI Congreso de Microbiología General; Argentina; 2015; 1-1CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/url/https://samige.org.ar/congresos-anteriores/Nacionalinfo:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-sa/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-09-03T09:53:38Zoai:ri.conicet.gov.ar:11336/239083instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-09-03 09:53:38.939CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse
dc.title.none.fl_str_mv Application of fluorescent in-situ hybridization in the evaluation of the biocides used in the oil industry
title Application of fluorescent in-situ hybridization in the evaluation of the biocides used in the oil industry
spellingShingle Application of fluorescent in-situ hybridization in the evaluation of the biocides used in the oil industry
Terada, Claudia Gabriela
Microbiologically Influenced Corrosion
Oil field reservoirs
Sulphate reducing bacteria
Fluorescent in-situ hybridization
title_short Application of fluorescent in-situ hybridization in the evaluation of the biocides used in the oil industry
title_full Application of fluorescent in-situ hybridization in the evaluation of the biocides used in the oil industry
title_fullStr Application of fluorescent in-situ hybridization in the evaluation of the biocides used in the oil industry
title_full_unstemmed Application of fluorescent in-situ hybridization in the evaluation of the biocides used in the oil industry
title_sort Application of fluorescent in-situ hybridization in the evaluation of the biocides used in the oil industry
dc.creator.none.fl_str_mv Terada, Claudia Gabriela
del Panno, Maria Teresa
Viera, Marisa Rosana
author Terada, Claudia Gabriela
author_facet Terada, Claudia Gabriela
del Panno, Maria Teresa
Viera, Marisa Rosana
author_role author
author2 del Panno, Maria Teresa
Viera, Marisa Rosana
author2_role author
author
dc.subject.none.fl_str_mv Microbiologically Influenced Corrosion
Oil field reservoirs
Sulphate reducing bacteria
Fluorescent in-situ hybridization
topic Microbiologically Influenced Corrosion
Oil field reservoirs
Sulphate reducing bacteria
Fluorescent in-situ hybridization
purl_subject.fl_str_mv https://purl.org/becyt/ford/2.8
https://purl.org/becyt/ford/2
dc.description.none.fl_txt_mv Microbiologically influenced corrosion (MIC) and souring of oilfield reservoirs as result of the presence of sulfate-reducingbacteria (SRB) are of great concern in the oil industry. Considering the limitations of conventional culture-based methods forstudying SRB, techniques involving the direct analysis of the microbial population from their genetic material are getting moreattention. One of them is Fluorescent in situ Hybridization (FISH), which uses fluorescently labeled oligonucleotide probes thathybridizes specifically to its complementary 16S rRNA target sequence within the intact cell. Using FISH, the abundance of thedetected microorganisms can be determined by counting the cells stained with a general DNA-binding dye and the cellshybridized with a specific probe. To control bacterial populations, biocides are commonly applied to injection waters andproduction facilities. The aim of this work was to evaluate the possibility of using FISH to help in the selection of an appropriatebiocide for the water treatment plant of an oil secondary recovery plant (OSRP). Three commercial biocides based on THPS andquaternary ammonium salts were used in the assay in a concentration of 200mg/l. Three replicates of each biocide in eachconcentration were done. The following probes (5P end-labeled with Cy3) were used: Eub338; Non338 and SRB385. Thefluorescence was detected with a Leica microscope, analyzing 15 to 20 images per sample. The inhibition effect of the biocideswas tested in OSRP water filtered inoculated with a microbial culture in PostagteB medium, obtained from the same water. Theinhibitory effect was determined by counting the cells hybridized with the Eub338 and SRB385 probes. The percentage ofhybridized vs DAPI-stained cells, RS%, was calculated. The RS% values for the Eub338 probe obtained after 4h of incubationat60ºC(water treatment plant condition) in the presence of biocides B1 and B3 were higher than those obtained with the control(without biocide). This behavior suggested a metabolic activation, associated with a high content of RNA in the cells. It could berelated with the mode of action of the chemicals or the application of a sub lethal dose. The RS% values obtained with B2 wereno significantly different from those of the control, associated with no inhibitory effect. The RS% values obtained after 4h ofincubation for SRB population showed that none of the tested biocides produced metabolic activation. B1 and B3 biocidal effectswere not different from that observed in the control. Instead, the lower RS% values obtained with B2 were associated with asignificant inhibitory effect on SRB population, showing that the SRB population was more sensitive to B2 effect under the testedcondition. These results suggested that FISH could be helpful in the screening of biocides, being a responsive and suitable testto detected inhibitory concentrations.
Fil: Terada, Claudia Gabriela. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - La Plata. Centro de Investigación y Desarrollo en Fermentaciones Industriales. Universidad Nacional de La Plata. Facultad de Ciencias Exactas. Centro de Investigación y Desarrollo en Fermentaciones Industriales; Argentina
Fil: del Panno, Maria Teresa. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - La Plata. Centro de Investigación y Desarrollo en Fermentaciones Industriales. Universidad Nacional de La Plata. Facultad de Ciencias Exactas. Centro de Investigación y Desarrollo en Fermentaciones Industriales; Argentina
Fil: Viera, Marisa Rosana. Provincia de Buenos Aires. Gobernación. Comisión de Investigaciones Científicas. Centro de Investigaciones en Tecnología de Pinturas. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - La Plata. Centro de Investigaciones en Tecnología de Pinturas; Argentina
XI Congreso de Microbiología General
Argentina
Sociedad Argentina de Microbiología General
description Microbiologically influenced corrosion (MIC) and souring of oilfield reservoirs as result of the presence of sulfate-reducingbacteria (SRB) are of great concern in the oil industry. Considering the limitations of conventional culture-based methods forstudying SRB, techniques involving the direct analysis of the microbial population from their genetic material are getting moreattention. One of them is Fluorescent in situ Hybridization (FISH), which uses fluorescently labeled oligonucleotide probes thathybridizes specifically to its complementary 16S rRNA target sequence within the intact cell. Using FISH, the abundance of thedetected microorganisms can be determined by counting the cells stained with a general DNA-binding dye and the cellshybridized with a specific probe. To control bacterial populations, biocides are commonly applied to injection waters andproduction facilities. The aim of this work was to evaluate the possibility of using FISH to help in the selection of an appropriatebiocide for the water treatment plant of an oil secondary recovery plant (OSRP). Three commercial biocides based on THPS andquaternary ammonium salts were used in the assay in a concentration of 200mg/l. Three replicates of each biocide in eachconcentration were done. The following probes (5P end-labeled with Cy3) were used: Eub338; Non338 and SRB385. Thefluorescence was detected with a Leica microscope, analyzing 15 to 20 images per sample. The inhibition effect of the biocideswas tested in OSRP water filtered inoculated with a microbial culture in PostagteB medium, obtained from the same water. Theinhibitory effect was determined by counting the cells hybridized with the Eub338 and SRB385 probes. The percentage ofhybridized vs DAPI-stained cells, RS%, was calculated. The RS% values for the Eub338 probe obtained after 4h of incubationat60ºC(water treatment plant condition) in the presence of biocides B1 and B3 were higher than those obtained with the control(without biocide). This behavior suggested a metabolic activation, associated with a high content of RNA in the cells. It could berelated with the mode of action of the chemicals or the application of a sub lethal dose. The RS% values obtained with B2 wereno significantly different from those of the control, associated with no inhibitory effect. The RS% values obtained after 4h ofincubation for SRB population showed that none of the tested biocides produced metabolic activation. B1 and B3 biocidal effectswere not different from that observed in the control. Instead, the lower RS% values obtained with B2 were associated with asignificant inhibitory effect on SRB population, showing that the SRB population was more sensitive to B2 effect under the testedcondition. These results suggested that FISH could be helpful in the screening of biocides, being a responsive and suitable testto detected inhibitory concentrations.
publishDate 2015
dc.date.none.fl_str_mv 2015
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info:eu-repo/semantics/conferenceObject
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Book
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dc.identifier.none.fl_str_mv http://hdl.handle.net/11336/239083
Application of fluorescent in-situ hybridization in the evaluation of the biocides used in the oil industry; XI Congreso de Microbiología General; Argentina; 2015; 1-1
CONICET Digital
CONICET
url http://hdl.handle.net/11336/239083
identifier_str_mv Application of fluorescent in-situ hybridization in the evaluation of the biocides used in the oil industry; XI Congreso de Microbiología General; Argentina; 2015; 1-1
CONICET Digital
CONICET
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dc.publisher.none.fl_str_mv Sociedad Argentina de Microbiología General
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