Biogeography of Speciation of Two Sister Species of Neotropical Amazona (Aves, Psittaciformes) Based on Mitochondrial Sequence Data

Autores
Rocha, Amanda V.; Rivera, Luis Osvaldo; Martinez, Jaime; Prestes, Nêmora P.; Caparroz, Renato
Año de publicación
2014
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
Coalescent theory provides powerful models for population genetic inference and is now increasingly important in estimates of divergence times and speciation research. We use molecular data and methods based on coalescent theory to investigate whether genetic evidence supports the hypothesis of A. pretrei and A. tucumana as separate species and whether genetic data allow us to assess which allopatric model seems to better explain the diversification process in these taxa. We sampled 13 A. tucumana from two provinces in northern Argentina and 28 A. pretrei from nine localities of Rio Grande do Sul, Brazil. A 491 bp segment of the mitochondrial gene cytochrome c oxidase I was evaluated using the haplotype network and phylogenetic methods. The divergence time and other demographic quantities were estimated using the isolation and migration model based on coalescent theory. The network and phylogenetic reconstructions showed similar results, supporting reciprocal monophyly for these two taxa. The divergence time of lineage separation was estimated to be approximately 1.3 million years ago, which corresponds to the lower Pleistocene. Our results enforce the current taxonomic status for these two Amazon species. They also support that A. pretrei and A. tucumana diverged with little or no gene flow approximately 1.3 million years ago, most likely after the establishment of a small population in the Southern Yungas forest by dispersion of a few founders from the A. pretrei ancestral population. This process may have been favored by habitat corridors formed in hot and humid periods of the Quaternary. Considering that these two species are considered threatened, the results were evaluated for their implications for the conservation of these two species.
Fil: Rocha, Amanda V.. Universidade do Brasília; Brasil
Fil: Rivera, Luis Osvaldo. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro de Investigaciones y Transferencia de Jujuy. Universidad Nacional de Jujuy. Centro de Investigaciones y Transferencia de Jujuy; Argentina
Fil: Martinez, Jaime. Associação Amigos do Meio Ambiente.Projeto Charão; Brasil
Fil: Prestes, Nêmora P.. Associação Amigos do Meio Ambiente.Projeto Charão; Brasil
Fil: Caparroz, Renato. Universidade do Brasília; Brasil
Materia
Parrots
Speciation
Biogeography
Genetic
Nivel de accesibilidad
acceso abierto
Condiciones de uso
https://creativecommons.org/licenses/by/2.5/ar/
Repositorio
CONICET Digital (CONICET)
Institución
Consejo Nacional de Investigaciones Científicas y Técnicas
OAI Identificador
oai:ri.conicet.gov.ar:11336/34612

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spelling Biogeography of Speciation of Two Sister Species of Neotropical Amazona (Aves, Psittaciformes) Based on Mitochondrial Sequence DataRocha, Amanda V.Rivera, Luis OsvaldoMartinez, JaimePrestes, Nêmora P.Caparroz, RenatoParrotsSpeciationBiogeographyGenetichttps://purl.org/becyt/ford/1.6https://purl.org/becyt/ford/1Coalescent theory provides powerful models for population genetic inference and is now increasingly important in estimates of divergence times and speciation research. We use molecular data and methods based on coalescent theory to investigate whether genetic evidence supports the hypothesis of A. pretrei and A. tucumana as separate species and whether genetic data allow us to assess which allopatric model seems to better explain the diversification process in these taxa. We sampled 13 A. tucumana from two provinces in northern Argentina and 28 A. pretrei from nine localities of Rio Grande do Sul, Brazil. A 491 bp segment of the mitochondrial gene cytochrome c oxidase I was evaluated using the haplotype network and phylogenetic methods. The divergence time and other demographic quantities were estimated using the isolation and migration model based on coalescent theory. The network and phylogenetic reconstructions showed similar results, supporting reciprocal monophyly for these two taxa. The divergence time of lineage separation was estimated to be approximately 1.3 million years ago, which corresponds to the lower Pleistocene. Our results enforce the current taxonomic status for these two Amazon species. They also support that A. pretrei and A. tucumana diverged with little or no gene flow approximately 1.3 million years ago, most likely after the establishment of a small population in the Southern Yungas forest by dispersion of a few founders from the A. pretrei ancestral population. This process may have been favored by habitat corridors formed in hot and humid periods of the Quaternary. Considering that these two species are considered threatened, the results were evaluated for their implications for the conservation of these two species.Fil: Rocha, Amanda V.. Universidade do Brasília; BrasilFil: Rivera, Luis Osvaldo. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro de Investigaciones y Transferencia de Jujuy. Universidad Nacional de Jujuy. Centro de Investigaciones y Transferencia de Jujuy; ArgentinaFil: Martinez, Jaime. Associação Amigos do Meio Ambiente.Projeto Charão; BrasilFil: Prestes, Nêmora P.. Associação Amigos do Meio Ambiente.Projeto Charão; BrasilFil: Caparroz, Renato. Universidade do Brasília; BrasilPublic Library of Science2014-09info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/34612Rocha, Amanda V.; Rivera, Luis Osvaldo; Martinez, Jaime; Prestes, Nêmora P.; Caparroz, Renato; Biogeography of Speciation of Two Sister Species of Neotropical Amazona (Aves, Psittaciformes) Based on Mitochondrial Sequence Data; Public Library of Science; Plos One; 9; 9; 9-2014; 1-10; e1080961932-6203CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/doi/10.1371/journal.pone.0108096info:eu-repo/semantics/altIdentifier/url/http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0108096info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-09-29T10:32:52Zoai:ri.conicet.gov.ar:11336/34612instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-09-29 10:32:52.661CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse
dc.title.none.fl_str_mv Biogeography of Speciation of Two Sister Species of Neotropical Amazona (Aves, Psittaciformes) Based on Mitochondrial Sequence Data
title Biogeography of Speciation of Two Sister Species of Neotropical Amazona (Aves, Psittaciformes) Based on Mitochondrial Sequence Data
spellingShingle Biogeography of Speciation of Two Sister Species of Neotropical Amazona (Aves, Psittaciformes) Based on Mitochondrial Sequence Data
Rocha, Amanda V.
Parrots
Speciation
Biogeography
Genetic
title_short Biogeography of Speciation of Two Sister Species of Neotropical Amazona (Aves, Psittaciformes) Based on Mitochondrial Sequence Data
title_full Biogeography of Speciation of Two Sister Species of Neotropical Amazona (Aves, Psittaciformes) Based on Mitochondrial Sequence Data
title_fullStr Biogeography of Speciation of Two Sister Species of Neotropical Amazona (Aves, Psittaciformes) Based on Mitochondrial Sequence Data
title_full_unstemmed Biogeography of Speciation of Two Sister Species of Neotropical Amazona (Aves, Psittaciformes) Based on Mitochondrial Sequence Data
title_sort Biogeography of Speciation of Two Sister Species of Neotropical Amazona (Aves, Psittaciformes) Based on Mitochondrial Sequence Data
dc.creator.none.fl_str_mv Rocha, Amanda V.
Rivera, Luis Osvaldo
Martinez, Jaime
Prestes, Nêmora P.
Caparroz, Renato
author Rocha, Amanda V.
author_facet Rocha, Amanda V.
Rivera, Luis Osvaldo
Martinez, Jaime
Prestes, Nêmora P.
Caparroz, Renato
author_role author
author2 Rivera, Luis Osvaldo
Martinez, Jaime
Prestes, Nêmora P.
Caparroz, Renato
author2_role author
author
author
author
dc.subject.none.fl_str_mv Parrots
Speciation
Biogeography
Genetic
topic Parrots
Speciation
Biogeography
Genetic
purl_subject.fl_str_mv https://purl.org/becyt/ford/1.6
https://purl.org/becyt/ford/1
dc.description.none.fl_txt_mv Coalescent theory provides powerful models for population genetic inference and is now increasingly important in estimates of divergence times and speciation research. We use molecular data and methods based on coalescent theory to investigate whether genetic evidence supports the hypothesis of A. pretrei and A. tucumana as separate species and whether genetic data allow us to assess which allopatric model seems to better explain the diversification process in these taxa. We sampled 13 A. tucumana from two provinces in northern Argentina and 28 A. pretrei from nine localities of Rio Grande do Sul, Brazil. A 491 bp segment of the mitochondrial gene cytochrome c oxidase I was evaluated using the haplotype network and phylogenetic methods. The divergence time and other demographic quantities were estimated using the isolation and migration model based on coalescent theory. The network and phylogenetic reconstructions showed similar results, supporting reciprocal monophyly for these two taxa. The divergence time of lineage separation was estimated to be approximately 1.3 million years ago, which corresponds to the lower Pleistocene. Our results enforce the current taxonomic status for these two Amazon species. They also support that A. pretrei and A. tucumana diverged with little or no gene flow approximately 1.3 million years ago, most likely after the establishment of a small population in the Southern Yungas forest by dispersion of a few founders from the A. pretrei ancestral population. This process may have been favored by habitat corridors formed in hot and humid periods of the Quaternary. Considering that these two species are considered threatened, the results were evaluated for their implications for the conservation of these two species.
Fil: Rocha, Amanda V.. Universidade do Brasília; Brasil
Fil: Rivera, Luis Osvaldo. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro de Investigaciones y Transferencia de Jujuy. Universidad Nacional de Jujuy. Centro de Investigaciones y Transferencia de Jujuy; Argentina
Fil: Martinez, Jaime. Associação Amigos do Meio Ambiente.Projeto Charão; Brasil
Fil: Prestes, Nêmora P.. Associação Amigos do Meio Ambiente.Projeto Charão; Brasil
Fil: Caparroz, Renato. Universidade do Brasília; Brasil
description Coalescent theory provides powerful models for population genetic inference and is now increasingly important in estimates of divergence times and speciation research. We use molecular data and methods based on coalescent theory to investigate whether genetic evidence supports the hypothesis of A. pretrei and A. tucumana as separate species and whether genetic data allow us to assess which allopatric model seems to better explain the diversification process in these taxa. We sampled 13 A. tucumana from two provinces in northern Argentina and 28 A. pretrei from nine localities of Rio Grande do Sul, Brazil. A 491 bp segment of the mitochondrial gene cytochrome c oxidase I was evaluated using the haplotype network and phylogenetic methods. The divergence time and other demographic quantities were estimated using the isolation and migration model based on coalescent theory. The network and phylogenetic reconstructions showed similar results, supporting reciprocal monophyly for these two taxa. The divergence time of lineage separation was estimated to be approximately 1.3 million years ago, which corresponds to the lower Pleistocene. Our results enforce the current taxonomic status for these two Amazon species. They also support that A. pretrei and A. tucumana diverged with little or no gene flow approximately 1.3 million years ago, most likely after the establishment of a small population in the Southern Yungas forest by dispersion of a few founders from the A. pretrei ancestral population. This process may have been favored by habitat corridors formed in hot and humid periods of the Quaternary. Considering that these two species are considered threatened, the results were evaluated for their implications for the conservation of these two species.
publishDate 2014
dc.date.none.fl_str_mv 2014-09
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/11336/34612
Rocha, Amanda V.; Rivera, Luis Osvaldo; Martinez, Jaime; Prestes, Nêmora P.; Caparroz, Renato; Biogeography of Speciation of Two Sister Species of Neotropical Amazona (Aves, Psittaciformes) Based on Mitochondrial Sequence Data; Public Library of Science; Plos One; 9; 9; 9-2014; 1-10; e108096
1932-6203
CONICET Digital
CONICET
url http://hdl.handle.net/11336/34612
identifier_str_mv Rocha, Amanda V.; Rivera, Luis Osvaldo; Martinez, Jaime; Prestes, Nêmora P.; Caparroz, Renato; Biogeography of Speciation of Two Sister Species of Neotropical Amazona (Aves, Psittaciformes) Based on Mitochondrial Sequence Data; Public Library of Science; Plos One; 9; 9; 9-2014; 1-10; e108096
1932-6203
CONICET Digital
CONICET
dc.language.none.fl_str_mv eng
language eng
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info:eu-repo/semantics/altIdentifier/url/http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0108096
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
https://creativecommons.org/licenses/by/2.5/ar/
eu_rights_str_mv openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by/2.5/ar/
dc.format.none.fl_str_mv application/pdf
application/pdf
dc.publisher.none.fl_str_mv Public Library of Science
publisher.none.fl_str_mv Public Library of Science
dc.source.none.fl_str_mv reponame:CONICET Digital (CONICET)
instname:Consejo Nacional de Investigaciones Científicas y Técnicas
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instname_str Consejo Nacional de Investigaciones Científicas y Técnicas
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