Development of microsatellite markers for Anadenanthera colubrina var. cebil (Fabaceae), a native tree from South America

Autores
Barrandeguy, Maria Eugenia; Prinz, Katheleen; García, María Victoria; Finkeldey, Reiner
Año de publicación
2012
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
•Premise of the study: Microsatellite primers were developed in the native legume tree Anadenanthera colubrina var. cebil to study the genetic diversity and genetic structure in natural populations in Argentina. •Methods and Results: Nine microsatellite markers were identified using a genomic library enriched for tandemly repeated motifs, eight of which markers were polymorphic. The polymorphism of these markers was assessed by investigating 20 individuals for fragment polymorphism; three to 13 alleles were observed for each locus. Observed and expected heterozygosities ranged from 0.300 to 1.000 and from 0.463 to 0.900, respectively. • Conclusions: These results confirm that these primers will be useful for investigating the genetic diversity and genetic structure of natural populations of A. colubrina var. cebil in future studies.
Fil: Barrandeguy, Maria Eugenia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Nordeste; Argentina
Fil: Prinz, Katheleen. Universität Göttingen; Alemania
Fil: García, María Victoria. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Nordeste; Argentina
Fil: Finkeldey, Reiner. Universität Göttingen; Alemania
Materia
Anadenanthera Colubrina Var. Cebil
Enrichment Protocol
Fabaceae
Nuclear Microsatellites
Polymorphism
Nivel de accesibilidad
acceso abierto
Condiciones de uso
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
Repositorio
CONICET Digital (CONICET)
Institución
Consejo Nacional de Investigaciones Científicas y Técnicas
OAI Identificador
oai:ri.conicet.gov.ar:11336/79925
Acceder
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oai_identifier_str oai:ri.conicet.gov.ar:11336/79925
network_acronym_str CONICETDig
repository_id_str 3498
network_name_str CONICET Digital (CONICET)
spelling Development of microsatellite markers for Anadenanthera colubrina var. cebil (Fabaceae), a native tree from South AmericaBarrandeguy, Maria EugeniaPrinz, KatheleenGarcía, María VictoriaFinkeldey, ReinerAnadenanthera Colubrina Var. CebilEnrichment ProtocolFabaceaeNuclear MicrosatellitesPolymorphismhttps://purl.org/becyt/ford/1.6https://purl.org/becyt/ford/1•Premise of the study: Microsatellite primers were developed in the native legume tree Anadenanthera colubrina var. cebil to study the genetic diversity and genetic structure in natural populations in Argentina. •Methods and Results: Nine microsatellite markers were identified using a genomic library enriched for tandemly repeated motifs, eight of which markers were polymorphic. The polymorphism of these markers was assessed by investigating 20 individuals for fragment polymorphism; three to 13 alleles were observed for each locus. Observed and expected heterozygosities ranged from 0.300 to 1.000 and from 0.463 to 0.900, respectively. • Conclusions: These results confirm that these primers will be useful for investigating the genetic diversity and genetic structure of natural populations of A. colubrina var. cebil in future studies.Fil: Barrandeguy, Maria Eugenia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Nordeste; ArgentinaFil: Prinz, Katheleen. Universität Göttingen; AlemaniaFil: García, María Victoria. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Nordeste; ArgentinaFil: Finkeldey, Reiner. Universität Göttingen; AlemaniaBotanical Society of America2012-09info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/79925Barrandeguy, Maria Eugenia; Prinz, Katheleen; García, María Victoria; Finkeldey, Reiner; Development of microsatellite markers for Anadenanthera colubrina var. cebil (Fabaceae), a native tree from South America; Botanical Society of America; American Journal of Botany; 99; 9; 9-2012; e372-e3740002-9122CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/url/https://bsapubs.onlinelibrary.wiley.com/doi/10.3732/ajb.1200078info:eu-repo/semantics/altIdentifier/doi/10.3732/ajb.1200078info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-sa/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-11-05T09:34:30Zoai:ri.conicet.gov.ar:11336/79925instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-11-05 09:34:30.43CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse
dc.title.none.fl_str_mv Development of microsatellite markers for Anadenanthera colubrina var. cebil (Fabaceae), a native tree from South America
title Development of microsatellite markers for Anadenanthera colubrina var. cebil (Fabaceae), a native tree from South America
spellingShingle Development of microsatellite markers for Anadenanthera colubrina var. cebil (Fabaceae), a native tree from South America
Barrandeguy, Maria Eugenia
Anadenanthera Colubrina Var. Cebil
Enrichment Protocol
Fabaceae
Nuclear Microsatellites
Polymorphism
title_short Development of microsatellite markers for Anadenanthera colubrina var. cebil (Fabaceae), a native tree from South America
title_full Development of microsatellite markers for Anadenanthera colubrina var. cebil (Fabaceae), a native tree from South America
title_fullStr Development of microsatellite markers for Anadenanthera colubrina var. cebil (Fabaceae), a native tree from South America
title_full_unstemmed Development of microsatellite markers for Anadenanthera colubrina var. cebil (Fabaceae), a native tree from South America
title_sort Development of microsatellite markers for Anadenanthera colubrina var. cebil (Fabaceae), a native tree from South America
dc.creator.none.fl_str_mv Barrandeguy, Maria Eugenia
Prinz, Katheleen
García, María Victoria
Finkeldey, Reiner
author Barrandeguy, Maria Eugenia
author_facet Barrandeguy, Maria Eugenia
Prinz, Katheleen
García, María Victoria
Finkeldey, Reiner
author_role author
author2 Prinz, Katheleen
García, María Victoria
Finkeldey, Reiner
author2_role author
author
author
dc.subject.none.fl_str_mv Anadenanthera Colubrina Var. Cebil
Enrichment Protocol
Fabaceae
Nuclear Microsatellites
Polymorphism
topic Anadenanthera Colubrina Var. Cebil
Enrichment Protocol
Fabaceae
Nuclear Microsatellites
Polymorphism
purl_subject.fl_str_mv https://purl.org/becyt/ford/1.6
https://purl.org/becyt/ford/1
dc.description.none.fl_txt_mv •Premise of the study: Microsatellite primers were developed in the native legume tree Anadenanthera colubrina var. cebil to study the genetic diversity and genetic structure in natural populations in Argentina. •Methods and Results: Nine microsatellite markers were identified using a genomic library enriched for tandemly repeated motifs, eight of which markers were polymorphic. The polymorphism of these markers was assessed by investigating 20 individuals for fragment polymorphism; three to 13 alleles were observed for each locus. Observed and expected heterozygosities ranged from 0.300 to 1.000 and from 0.463 to 0.900, respectively. • Conclusions: These results confirm that these primers will be useful for investigating the genetic diversity and genetic structure of natural populations of A. colubrina var. cebil in future studies.
Fil: Barrandeguy, Maria Eugenia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Nordeste; Argentina
Fil: Prinz, Katheleen. Universität Göttingen; Alemania
Fil: García, María Victoria. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Nordeste; Argentina
Fil: Finkeldey, Reiner. Universität Göttingen; Alemania
description •Premise of the study: Microsatellite primers were developed in the native legume tree Anadenanthera colubrina var. cebil to study the genetic diversity and genetic structure in natural populations in Argentina. •Methods and Results: Nine microsatellite markers were identified using a genomic library enriched for tandemly repeated motifs, eight of which markers were polymorphic. The polymorphism of these markers was assessed by investigating 20 individuals for fragment polymorphism; three to 13 alleles were observed for each locus. Observed and expected heterozygosities ranged from 0.300 to 1.000 and from 0.463 to 0.900, respectively. • Conclusions: These results confirm that these primers will be useful for investigating the genetic diversity and genetic structure of natural populations of A. colubrina var. cebil in future studies.
publishDate 2012
dc.date.none.fl_str_mv 2012-09
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/11336/79925
Barrandeguy, Maria Eugenia; Prinz, Katheleen; García, María Victoria; Finkeldey, Reiner; Development of microsatellite markers for Anadenanthera colubrina var. cebil (Fabaceae), a native tree from South America; Botanical Society of America; American Journal of Botany; 99; 9; 9-2012; e372-e374
0002-9122
CONICET Digital
CONICET
url http://hdl.handle.net/11336/79925
identifier_str_mv Barrandeguy, Maria Eugenia; Prinz, Katheleen; García, María Victoria; Finkeldey, Reiner; Development of microsatellite markers for Anadenanthera colubrina var. cebil (Fabaceae), a native tree from South America; Botanical Society of America; American Journal of Botany; 99; 9; 9-2012; e372-e374
0002-9122
CONICET Digital
CONICET
dc.language.none.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv info:eu-repo/semantics/altIdentifier/url/https://bsapubs.onlinelibrary.wiley.com/doi/10.3732/ajb.1200078
info:eu-repo/semantics/altIdentifier/doi/10.3732/ajb.1200078
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
eu_rights_str_mv openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
dc.format.none.fl_str_mv application/pdf
application/pdf
application/pdf
dc.publisher.none.fl_str_mv Botanical Society of America
publisher.none.fl_str_mv Botanical Society of America
dc.source.none.fl_str_mv reponame:CONICET Digital (CONICET)
instname:Consejo Nacional de Investigaciones Científicas y Técnicas
reponame_str CONICET Digital (CONICET)
collection CONICET Digital (CONICET)
instname_str Consejo Nacional de Investigaciones Científicas y Técnicas
repository.name.fl_str_mv CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas
repository.mail.fl_str_mv dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar
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score 13.087074

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