Genetic diversity and population structure of cotton (Gossypium hirsutum L. race latifolium H.) using microsatellite markers

Autores
Domingos Moiana, Leonel; Soares Vidigal Filho, Pedro; Gonçalves Vidigal, Maria Celeste; Figueiredo Lacanallo, Giselly; Galván, Marta Zulema; de Carvalho, Luiz Paulo; Maleia, Manuel Pedro; Maritza Pacheco, Cynthia; Ribeiro, Tiago; Zeni Neto, Hugo; Kelly Coimbra, Gislayne
Año de publicación
2012
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
Cotton (Gossypium spp.) is the world?s leading natural fiber crop and is cultivated in diverse temperate and tropical areas. The proper use of cotton genetic resources allows breeders to identify and select superior parents for breeding programs. In this sense, molecular markers are important tools for polymorphism identification in genetic diversity analyses. The objective of this study was to evaluate genetic diversity and population structure in tetraploid cotton (Gossypium hirsutum L. race latifolium H.) by means of microsatellite markers. 43 cultivars and inbred lines from Africa, United States and Brazil were analyzed. From a total of 33 SSRs markers, 15 markers revealed 104 polymorphic SSR alleles. Four groups were identified applying different methods (the probabilistic method, principal coordinates analysis and neighbor joining tree). American cultivars and inbred lines were included in group I; African cultivars in group II; and Brazilian cultivars in groups II, III and IV. The FST index indicated high genetic variability among the cultivars and inbred lines studied. In general, American cultivars were the most divergent in relation to African and Brazilian ones. The dissimilarity index ranged from 0.06 to 0.90 and the lowest genetic divergence was observed between TAMCOT22 and TAM96WD-69s(L). Combination of American cultivars and inbred lines with African and Brazilian cultivars is recommended to obtain superior transgressive segregants in order to improve yield in cotton breeding programs.
Fil: Domingos Moiana, Leonel. No especifíca;
Fil: Soares Vidigal Filho, Pedro. Universidade Estadual de Maringá; Brasil
Fil: Gonçalves Vidigal, Maria Celeste. Universidade Estadual de Maringá; Brasil
Fil: Figueiredo Lacanallo, Giselly. Universidade Estadual de Maringá; Brasil
Fil: Galván, Marta Zulema. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Salta; Argentina. Instituto Nacional de Tecnología Agropecuaria; Argentina
Fil: de Carvalho, Luiz Paulo. No especifíca;
Fil: Maleia, Manuel Pedro. No especifíca;
Fil: Maritza Pacheco, Cynthia. Universidade Estadual de Maringá; Brasil
Fil: Ribeiro, Tiago. Universidade Estadual de Maringá; Brasil
Fil: Zeni Neto, Hugo. Universidade Estadual de Maringá; Brasil
Fil: Kelly Coimbra, Gislayne. Universidade Estadual de Maringá; Brasil
Materia
cotton
microsatellites
diversity
population structure
Nivel de accesibilidad
acceso abierto
Condiciones de uso
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
Repositorio
CONICET Digital (CONICET)
Institución
Consejo Nacional de Investigaciones Científicas y Técnicas
OAI Identificador
oai:ri.conicet.gov.ar:11336/197617
Acceder
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oai_identifier_str oai:ri.conicet.gov.ar:11336/197617
network_acronym_str CONICETDig
repository_id_str 3498
network_name_str CONICET Digital (CONICET)
spelling Genetic diversity and population structure of cotton (Gossypium hirsutum L. race latifolium H.) using microsatellite markersDomingos Moiana, LeonelSoares Vidigal Filho, PedroGonçalves Vidigal, Maria CelesteFigueiredo Lacanallo, GisellyGalván, Marta Zulemade Carvalho, Luiz PauloMaleia, Manuel PedroMaritza Pacheco, CynthiaRibeiro, TiagoZeni Neto, HugoKelly Coimbra, Gislaynecottonmicrosatellitesdiversitypopulation structurehttps://purl.org/becyt/ford/4.4https://purl.org/becyt/ford/4Cotton (Gossypium spp.) is the world?s leading natural fiber crop and is cultivated in diverse temperate and tropical areas. The proper use of cotton genetic resources allows breeders to identify and select superior parents for breeding programs. In this sense, molecular markers are important tools for polymorphism identification in genetic diversity analyses. The objective of this study was to evaluate genetic diversity and population structure in tetraploid cotton (Gossypium hirsutum L. race latifolium H.) by means of microsatellite markers. 43 cultivars and inbred lines from Africa, United States and Brazil were analyzed. From a total of 33 SSRs markers, 15 markers revealed 104 polymorphic SSR alleles. Four groups were identified applying different methods (the probabilistic method, principal coordinates analysis and neighbor joining tree). American cultivars and inbred lines were included in group I; African cultivars in group II; and Brazilian cultivars in groups II, III and IV. The FST index indicated high genetic variability among the cultivars and inbred lines studied. In general, American cultivars were the most divergent in relation to African and Brazilian ones. The dissimilarity index ranged from 0.06 to 0.90 and the lowest genetic divergence was observed between TAMCOT22 and TAM96WD-69s(L). Combination of American cultivars and inbred lines with African and Brazilian cultivars is recommended to obtain superior transgressive segregants in order to improve yield in cotton breeding programs.Fil: Domingos Moiana, Leonel. No especifíca;Fil: Soares Vidigal Filho, Pedro. Universidade Estadual de Maringá; BrasilFil: Gonçalves Vidigal, Maria Celeste. Universidade Estadual de Maringá; BrasilFil: Figueiredo Lacanallo, Giselly. Universidade Estadual de Maringá; BrasilFil: Galván, Marta Zulema. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Salta; Argentina. Instituto Nacional de Tecnología Agropecuaria; ArgentinaFil: de Carvalho, Luiz Paulo. No especifíca;Fil: Maleia, Manuel Pedro. No especifíca;Fil: Maritza Pacheco, Cynthia. Universidade Estadual de Maringá; BrasilFil: Ribeiro, Tiago. Universidade Estadual de Maringá; BrasilFil: Zeni Neto, Hugo. Universidade Estadual de Maringá; BrasilFil: Kelly Coimbra, Gislayne. Universidade Estadual de Maringá; BrasilAcademic Journals2012-10info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/197617Domingos Moiana, Leonel ; Soares Vidigal Filho, Pedro; Gonçalves Vidigal, Maria Celeste ; Figueiredo Lacanallo, Giselly ; Galván, Marta Zulema; et al.; Genetic diversity and population structure of cotton (Gossypium hirsutum L. race latifolium H.) using microsatellite markers; Academic Journals; African Journal of Biotechnology; 11; 54; 10-2012; 11640-116471684-5315CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/url/https://academicjournals.org/journal/AJB/article-abstract/1D3660132928info:eu-repo/semantics/altIdentifier/doi/10.5897/AJB11.4084info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-sa/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-09-29T09:35:08Zoai:ri.conicet.gov.ar:11336/197617instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-09-29 09:35:09.277CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse
dc.title.none.fl_str_mv Genetic diversity and population structure of cotton (Gossypium hirsutum L. race latifolium H.) using microsatellite markers
title Genetic diversity and population structure of cotton (Gossypium hirsutum L. race latifolium H.) using microsatellite markers
spellingShingle Genetic diversity and population structure of cotton (Gossypium hirsutum L. race latifolium H.) using microsatellite markers
Domingos Moiana, Leonel
cotton
microsatellites
diversity
population structure
title_short Genetic diversity and population structure of cotton (Gossypium hirsutum L. race latifolium H.) using microsatellite markers
title_full Genetic diversity and population structure of cotton (Gossypium hirsutum L. race latifolium H.) using microsatellite markers
title_fullStr Genetic diversity and population structure of cotton (Gossypium hirsutum L. race latifolium H.) using microsatellite markers
title_full_unstemmed Genetic diversity and population structure of cotton (Gossypium hirsutum L. race latifolium H.) using microsatellite markers
title_sort Genetic diversity and population structure of cotton (Gossypium hirsutum L. race latifolium H.) using microsatellite markers
dc.creator.none.fl_str_mv Domingos Moiana, Leonel
Soares Vidigal Filho, Pedro
Gonçalves Vidigal, Maria Celeste
Figueiredo Lacanallo, Giselly
Galván, Marta Zulema
de Carvalho, Luiz Paulo
Maleia, Manuel Pedro
Maritza Pacheco, Cynthia
Ribeiro, Tiago
Zeni Neto, Hugo
Kelly Coimbra, Gislayne
author Domingos Moiana, Leonel
author_facet Domingos Moiana, Leonel
Soares Vidigal Filho, Pedro
Gonçalves Vidigal, Maria Celeste
Figueiredo Lacanallo, Giselly
Galván, Marta Zulema
de Carvalho, Luiz Paulo
Maleia, Manuel Pedro
Maritza Pacheco, Cynthia
Ribeiro, Tiago
Zeni Neto, Hugo
Kelly Coimbra, Gislayne
author_role author
author2 Soares Vidigal Filho, Pedro
Gonçalves Vidigal, Maria Celeste
Figueiredo Lacanallo, Giselly
Galván, Marta Zulema
de Carvalho, Luiz Paulo
Maleia, Manuel Pedro
Maritza Pacheco, Cynthia
Ribeiro, Tiago
Zeni Neto, Hugo
Kelly Coimbra, Gislayne
author2_role author
author
author
author
author
author
author
author
author
author
dc.subject.none.fl_str_mv cotton
microsatellites
diversity
population structure
topic cotton
microsatellites
diversity
population structure
purl_subject.fl_str_mv https://purl.org/becyt/ford/4.4
https://purl.org/becyt/ford/4
dc.description.none.fl_txt_mv Cotton (Gossypium spp.) is the world?s leading natural fiber crop and is cultivated in diverse temperate and tropical areas. The proper use of cotton genetic resources allows breeders to identify and select superior parents for breeding programs. In this sense, molecular markers are important tools for polymorphism identification in genetic diversity analyses. The objective of this study was to evaluate genetic diversity and population structure in tetraploid cotton (Gossypium hirsutum L. race latifolium H.) by means of microsatellite markers. 43 cultivars and inbred lines from Africa, United States and Brazil were analyzed. From a total of 33 SSRs markers, 15 markers revealed 104 polymorphic SSR alleles. Four groups were identified applying different methods (the probabilistic method, principal coordinates analysis and neighbor joining tree). American cultivars and inbred lines were included in group I; African cultivars in group II; and Brazilian cultivars in groups II, III and IV. The FST index indicated high genetic variability among the cultivars and inbred lines studied. In general, American cultivars were the most divergent in relation to African and Brazilian ones. The dissimilarity index ranged from 0.06 to 0.90 and the lowest genetic divergence was observed between TAMCOT22 and TAM96WD-69s(L). Combination of American cultivars and inbred lines with African and Brazilian cultivars is recommended to obtain superior transgressive segregants in order to improve yield in cotton breeding programs.
Fil: Domingos Moiana, Leonel. No especifíca;
Fil: Soares Vidigal Filho, Pedro. Universidade Estadual de Maringá; Brasil
Fil: Gonçalves Vidigal, Maria Celeste. Universidade Estadual de Maringá; Brasil
Fil: Figueiredo Lacanallo, Giselly. Universidade Estadual de Maringá; Brasil
Fil: Galván, Marta Zulema. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Salta; Argentina. Instituto Nacional de Tecnología Agropecuaria; Argentina
Fil: de Carvalho, Luiz Paulo. No especifíca;
Fil: Maleia, Manuel Pedro. No especifíca;
Fil: Maritza Pacheco, Cynthia. Universidade Estadual de Maringá; Brasil
Fil: Ribeiro, Tiago. Universidade Estadual de Maringá; Brasil
Fil: Zeni Neto, Hugo. Universidade Estadual de Maringá; Brasil
Fil: Kelly Coimbra, Gislayne. Universidade Estadual de Maringá; Brasil
description Cotton (Gossypium spp.) is the world?s leading natural fiber crop and is cultivated in diverse temperate and tropical areas. The proper use of cotton genetic resources allows breeders to identify and select superior parents for breeding programs. In this sense, molecular markers are important tools for polymorphism identification in genetic diversity analyses. The objective of this study was to evaluate genetic diversity and population structure in tetraploid cotton (Gossypium hirsutum L. race latifolium H.) by means of microsatellite markers. 43 cultivars and inbred lines from Africa, United States and Brazil were analyzed. From a total of 33 SSRs markers, 15 markers revealed 104 polymorphic SSR alleles. Four groups were identified applying different methods (the probabilistic method, principal coordinates analysis and neighbor joining tree). American cultivars and inbred lines were included in group I; African cultivars in group II; and Brazilian cultivars in groups II, III and IV. The FST index indicated high genetic variability among the cultivars and inbred lines studied. In general, American cultivars were the most divergent in relation to African and Brazilian ones. The dissimilarity index ranged from 0.06 to 0.90 and the lowest genetic divergence was observed between TAMCOT22 and TAM96WD-69s(L). Combination of American cultivars and inbred lines with African and Brazilian cultivars is recommended to obtain superior transgressive segregants in order to improve yield in cotton breeding programs.
publishDate 2012
dc.date.none.fl_str_mv 2012-10
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/11336/197617
Domingos Moiana, Leonel ; Soares Vidigal Filho, Pedro; Gonçalves Vidigal, Maria Celeste ; Figueiredo Lacanallo, Giselly ; Galván, Marta Zulema; et al.; Genetic diversity and population structure of cotton (Gossypium hirsutum L. race latifolium H.) using microsatellite markers; Academic Journals; African Journal of Biotechnology; 11; 54; 10-2012; 11640-11647
1684-5315
CONICET Digital
CONICET
url http://hdl.handle.net/11336/197617
identifier_str_mv Domingos Moiana, Leonel ; Soares Vidigal Filho, Pedro; Gonçalves Vidigal, Maria Celeste ; Figueiredo Lacanallo, Giselly ; Galván, Marta Zulema; et al.; Genetic diversity and population structure of cotton (Gossypium hirsutum L. race latifolium H.) using microsatellite markers; Academic Journals; African Journal of Biotechnology; 11; 54; 10-2012; 11640-11647
1684-5315
CONICET Digital
CONICET
dc.language.none.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv info:eu-repo/semantics/altIdentifier/url/https://academicjournals.org/journal/AJB/article-abstract/1D3660132928
info:eu-repo/semantics/altIdentifier/doi/10.5897/AJB11.4084
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
eu_rights_str_mv openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
dc.format.none.fl_str_mv application/pdf
application/pdf
dc.publisher.none.fl_str_mv Academic Journals
publisher.none.fl_str_mv Academic Journals
dc.source.none.fl_str_mv reponame:CONICET Digital (CONICET)
instname:Consejo Nacional de Investigaciones Científicas y Técnicas
reponame_str CONICET Digital (CONICET)
collection CONICET Digital (CONICET)
instname_str Consejo Nacional de Investigaciones Científicas y Técnicas
repository.name.fl_str_mv CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas
repository.mail.fl_str_mv dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar
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score 13.070432

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