CBM20CP, a novel functional protein of starch metabolism in green algae

Autores
Velázquez, María Belén; Hedin, Nicolas; Barchiesi, Julieta; Gomez Casati, Diego Fabian; Busi, María Victoria
Año de publicación
2021
Idioma
inglés
Tipo de recurso
documento de conferencia
Estado
versión publicada
Descripción
Ostreococcus tauri is a marine picoalga, the smallest free-living eukaryotic and the simplest photosynthetic organism described to date, which has a single chloroplast and mitochondrion. The O. tauri genome codes for less than 8000 genes with low genetic redundancy, however, the pathway of starch metabolism would be conserved. This alga has all the enzymes that participate in the synthesis of starch in higher plants encoded in its genome, at least one ADPGlucose pyrophosphorylase (ADPGlc PPase), one GBSS, SSs I-III (SSI, II, and III), SBEI-II and ISA1- found. It is well known that SSIV regulates the number of starch granules in Arabidopsis and would also participate in the initiation of starch synthesis. The fact that O. tauri contains a single starch granule could be related to the lack of this enzyme. Moreover, we previously described the presence of three different isoforms of SSIII with a variable number of Starch binding domains (SBDs), suggesting that the synthesis and regulation of starch metabolism in this organism is highly complex. SBDs
are a special subfamily of CBMs that bind to starch and have acquired the evolutionary advantage of being able to disrupt the surface of their substrate due to the presence of two binding sites. These domains have been classified into thirteen families, in special SBDs included in CBM20 family were first found in starch hydrolases, however, they are present in several amylolytic and non-amylolytic enzymes from plants, mammals, archaea, bacteria, and fungi. In general, CBM20 are attached also to a CD and many of them have regulatory functions and a moderate affinity to starch. Only few proteins from algae containing a CBM20 have been characterized, such a laforin homolog from the red algae Chondrus crispus and a the SAGA1 protein from C. reinhardtii, which is involved in shaping starch plates. Although the O.tauri genome is fully sequenced, there are still many genes and proteins to which no function was assigned. Here, we identify the OT_ostta06g01880 gene that encodes CBM20CP, a plastid protein which contains a central carbohydrate binding domain of the CBM20 family, a coiled coil domain at the C-terminus and lacks catalytic activity. We demonstrate that CBM20CP has the ability to bind starch, amylose and amylopectin with different affinities. Furthermore, this protein interacts with OsttaSSIII-B, increasing its binding to starch granules, its catalytic efficiency and promoting granule growth. The results allow us to postulate a regulatory role for CBM20CP in starch metabolism in green algae.
Fil: Velázquez, María Belén. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Rosario. Centro de Estudios Fotosintéticos y Bioquímicos. Universidad Nacional de Rosario. Facultad de Ciencias Bioquímicas y Farmacéuticas. Centro de Estudios Fotosintéticos y Bioquímicos; Argentina
Fil: Hedin, Nicolas. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Rosario. Centro de Estudios Fotosintéticos y Bioquímicos. Universidad Nacional de Rosario. Facultad de Ciencias Bioquímicas y Farmacéuticas. Centro de Estudios Fotosintéticos y Bioquímicos; Argentina
Fil: Barchiesi, Julieta. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Rosario. Centro de Estudios Fotosintéticos y Bioquímicos. Universidad Nacional de Rosario. Facultad de Ciencias Bioquímicas y Farmacéuticas. Centro de Estudios Fotosintéticos y Bioquímicos; Argentina
Fil: Gomez Casati, Diego Fabian. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Rosario. Centro de Estudios Fotosintéticos y Bioquímicos. Universidad Nacional de Rosario. Facultad de Ciencias Bioquímicas y Farmacéuticas. Centro de Estudios Fotosintéticos y Bioquímicos; Argentina
Fil: Busi, María Victoria. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Rosario. Centro de Estudios Fotosintéticos y Bioquímicos. Universidad Nacional de Rosario. Facultad de Ciencias Bioquímicas y Farmacéuticas. Centro de Estudios Fotosintéticos y Bioquímicos; Argentina
LVII SAIB Meeting; XVI SAMIGE Meeting
Ciudad Autónoma de Buenos Aires
Argentina
Sociedad Argentina de Investigación en Bioquímica y Biología Molecular
Asociación Civil de Microbiología General
Materia
ALGAS
ALMIDON
PROTEINAS REGULATORIAS
MODULOS DE UNION A ALMIDON
Nivel de accesibilidad
acceso abierto
Condiciones de uso
https://creativecommons.org/licenses/by/2.5/ar/
Repositorio
CONICET Digital (CONICET)
Institución
Consejo Nacional de Investigaciones Científicas y Técnicas
OAI Identificador
oai:ri.conicet.gov.ar:11336/204453

id CONICETDig_190a921bab472a0d4e26e251c9d9fbf9
oai_identifier_str oai:ri.conicet.gov.ar:11336/204453
network_acronym_str CONICETDig
repository_id_str 3498
network_name_str CONICET Digital (CONICET)
spelling CBM20CP, a novel functional protein of starch metabolism in green algaeVelázquez, María BelénHedin, NicolasBarchiesi, JulietaGomez Casati, Diego FabianBusi, María VictoriaALGASALMIDONPROTEINAS REGULATORIASMODULOS DE UNION A ALMIDONhttps://purl.org/becyt/ford/1.6https://purl.org/becyt/ford/1Ostreococcus tauri is a marine picoalga, the smallest free-living eukaryotic and the simplest photosynthetic organism described to date, which has a single chloroplast and mitochondrion. The O. tauri genome codes for less than 8000 genes with low genetic redundancy, however, the pathway of starch metabolism would be conserved. This alga has all the enzymes that participate in the synthesis of starch in higher plants encoded in its genome, at least one ADPGlucose pyrophosphorylase (ADPGlc PPase), one GBSS, SSs I-III (SSI, II, and III), SBEI-II and ISA1- found. It is well known that SSIV regulates the number of starch granules in Arabidopsis and would also participate in the initiation of starch synthesis. The fact that O. tauri contains a single starch granule could be related to the lack of this enzyme. Moreover, we previously described the presence of three different isoforms of SSIII with a variable number of Starch binding domains (SBDs), suggesting that the synthesis and regulation of starch metabolism in this organism is highly complex. SBDs<br />are a special subfamily of CBMs that bind to starch and have acquired the evolutionary advantage of being able to disrupt the surface of their substrate due to the presence of two binding sites. These domains have been classified into thirteen families, in special SBDs included in CBM20 family were first found in starch hydrolases, however, they are present in several amylolytic and non-amylolytic enzymes from plants, mammals, archaea, bacteria, and fungi. In general, CBM20 are attached also to a CD and many of them have regulatory functions and a moderate affinity to starch. Only few proteins from algae containing a CBM20 have been characterized, such a laforin homolog from the red algae Chondrus crispus and a the SAGA1 protein from C. reinhardtii, which is involved in shaping starch plates. Although the O.tauri genome is fully sequenced, there are still many genes and proteins to which no function was assigned. Here, we identify the OT_ostta06g01880 gene that encodes CBM20CP, a plastid protein which contains a central carbohydrate binding domain of the CBM20 family, a coiled coil domain at the C-terminus and lacks catalytic activity. We demonstrate that CBM20CP has the ability to bind starch, amylose and amylopectin with different affinities. Furthermore, this protein interacts with OsttaSSIII-B, increasing its binding to starch granules, its catalytic efficiency and promoting granule growth. The results allow us to postulate a regulatory role for CBM20CP in starch metabolism in green algae.Fil: Velázquez, María Belén. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Rosario. Centro de Estudios Fotosintéticos y Bioquímicos. Universidad Nacional de Rosario. Facultad de Ciencias Bioquímicas y Farmacéuticas. Centro de Estudios Fotosintéticos y Bioquímicos; ArgentinaFil: Hedin, Nicolas. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Rosario. Centro de Estudios Fotosintéticos y Bioquímicos. Universidad Nacional de Rosario. Facultad de Ciencias Bioquímicas y Farmacéuticas. Centro de Estudios Fotosintéticos y Bioquímicos; ArgentinaFil: Barchiesi, Julieta. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Rosario. Centro de Estudios Fotosintéticos y Bioquímicos. Universidad Nacional de Rosario. Facultad de Ciencias Bioquímicas y Farmacéuticas. Centro de Estudios Fotosintéticos y Bioquímicos; ArgentinaFil: Gomez Casati, Diego Fabian. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Rosario. Centro de Estudios Fotosintéticos y Bioquímicos. Universidad Nacional de Rosario. Facultad de Ciencias Bioquímicas y Farmacéuticas. Centro de Estudios Fotosintéticos y Bioquímicos; ArgentinaFil: Busi, María Victoria. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Rosario. Centro de Estudios Fotosintéticos y Bioquímicos. Universidad Nacional de Rosario. Facultad de Ciencias Bioquímicas y Farmacéuticas. Centro de Estudios Fotosintéticos y Bioquímicos; ArgentinaLVII SAIB Meeting; XVI SAMIGE MeetingCiudad Autónoma de Buenos AiresArgentinaSociedad Argentina de Investigación en Bioquímica y Biología MolecularAsociación Civil de Microbiología GeneralTech Science Press2021info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/conferenceObjectCongresoJournalhttp://purl.org/coar/resource_type/c_5794info:ar-repo/semantics/documentoDeConferenciaapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/204453CBM20CP, a novel functional protein of starch metabolism in green algae; LVII SAIB Meeting; XVI SAMIGE Meeting; Ciudad Autónoma de Buenos Aires; Argentina; 2021; 61-610327-9545CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/url/http://www.samige.org.ar/admin/news/files/177-Biocell-Preprint-SAIB-SAMIGE-2021.pdfNacionalinfo:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-10-15T15:02:22Zoai:ri.conicet.gov.ar:11336/204453instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-10-15 15:02:22.814CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse
dc.title.none.fl_str_mv CBM20CP, a novel functional protein of starch metabolism in green algae
title CBM20CP, a novel functional protein of starch metabolism in green algae
spellingShingle CBM20CP, a novel functional protein of starch metabolism in green algae
Velázquez, María Belén
ALGAS
ALMIDON
PROTEINAS REGULATORIAS
MODULOS DE UNION A ALMIDON
title_short CBM20CP, a novel functional protein of starch metabolism in green algae
title_full CBM20CP, a novel functional protein of starch metabolism in green algae
title_fullStr CBM20CP, a novel functional protein of starch metabolism in green algae
title_full_unstemmed CBM20CP, a novel functional protein of starch metabolism in green algae
title_sort CBM20CP, a novel functional protein of starch metabolism in green algae
dc.creator.none.fl_str_mv Velázquez, María Belén
Hedin, Nicolas
Barchiesi, Julieta
Gomez Casati, Diego Fabian
Busi, María Victoria
author Velázquez, María Belén
author_facet Velázquez, María Belén
Hedin, Nicolas
Barchiesi, Julieta
Gomez Casati, Diego Fabian
Busi, María Victoria
author_role author
author2 Hedin, Nicolas
Barchiesi, Julieta
Gomez Casati, Diego Fabian
Busi, María Victoria
author2_role author
author
author
author
dc.subject.none.fl_str_mv ALGAS
ALMIDON
PROTEINAS REGULATORIAS
MODULOS DE UNION A ALMIDON
topic ALGAS
ALMIDON
PROTEINAS REGULATORIAS
MODULOS DE UNION A ALMIDON
purl_subject.fl_str_mv https://purl.org/becyt/ford/1.6
https://purl.org/becyt/ford/1
dc.description.none.fl_txt_mv Ostreococcus tauri is a marine picoalga, the smallest free-living eukaryotic and the simplest photosynthetic organism described to date, which has a single chloroplast and mitochondrion. The O. tauri genome codes for less than 8000 genes with low genetic redundancy, however, the pathway of starch metabolism would be conserved. This alga has all the enzymes that participate in the synthesis of starch in higher plants encoded in its genome, at least one ADPGlucose pyrophosphorylase (ADPGlc PPase), one GBSS, SSs I-III (SSI, II, and III), SBEI-II and ISA1- found. It is well known that SSIV regulates the number of starch granules in Arabidopsis and would also participate in the initiation of starch synthesis. The fact that O. tauri contains a single starch granule could be related to the lack of this enzyme. Moreover, we previously described the presence of three different isoforms of SSIII with a variable number of Starch binding domains (SBDs), suggesting that the synthesis and regulation of starch metabolism in this organism is highly complex. SBDs<br />are a special subfamily of CBMs that bind to starch and have acquired the evolutionary advantage of being able to disrupt the surface of their substrate due to the presence of two binding sites. These domains have been classified into thirteen families, in special SBDs included in CBM20 family were first found in starch hydrolases, however, they are present in several amylolytic and non-amylolytic enzymes from plants, mammals, archaea, bacteria, and fungi. In general, CBM20 are attached also to a CD and many of them have regulatory functions and a moderate affinity to starch. Only few proteins from algae containing a CBM20 have been characterized, such a laforin homolog from the red algae Chondrus crispus and a the SAGA1 protein from C. reinhardtii, which is involved in shaping starch plates. Although the O.tauri genome is fully sequenced, there are still many genes and proteins to which no function was assigned. Here, we identify the OT_ostta06g01880 gene that encodes CBM20CP, a plastid protein which contains a central carbohydrate binding domain of the CBM20 family, a coiled coil domain at the C-terminus and lacks catalytic activity. We demonstrate that CBM20CP has the ability to bind starch, amylose and amylopectin with different affinities. Furthermore, this protein interacts with OsttaSSIII-B, increasing its binding to starch granules, its catalytic efficiency and promoting granule growth. The results allow us to postulate a regulatory role for CBM20CP in starch metabolism in green algae.
Fil: Velázquez, María Belén. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Rosario. Centro de Estudios Fotosintéticos y Bioquímicos. Universidad Nacional de Rosario. Facultad de Ciencias Bioquímicas y Farmacéuticas. Centro de Estudios Fotosintéticos y Bioquímicos; Argentina
Fil: Hedin, Nicolas. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Rosario. Centro de Estudios Fotosintéticos y Bioquímicos. Universidad Nacional de Rosario. Facultad de Ciencias Bioquímicas y Farmacéuticas. Centro de Estudios Fotosintéticos y Bioquímicos; Argentina
Fil: Barchiesi, Julieta. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Rosario. Centro de Estudios Fotosintéticos y Bioquímicos. Universidad Nacional de Rosario. Facultad de Ciencias Bioquímicas y Farmacéuticas. Centro de Estudios Fotosintéticos y Bioquímicos; Argentina
Fil: Gomez Casati, Diego Fabian. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Rosario. Centro de Estudios Fotosintéticos y Bioquímicos. Universidad Nacional de Rosario. Facultad de Ciencias Bioquímicas y Farmacéuticas. Centro de Estudios Fotosintéticos y Bioquímicos; Argentina
Fil: Busi, María Victoria. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Rosario. Centro de Estudios Fotosintéticos y Bioquímicos. Universidad Nacional de Rosario. Facultad de Ciencias Bioquímicas y Farmacéuticas. Centro de Estudios Fotosintéticos y Bioquímicos; Argentina
LVII SAIB Meeting; XVI SAMIGE Meeting
Ciudad Autónoma de Buenos Aires
Argentina
Sociedad Argentina de Investigación en Bioquímica y Biología Molecular
Asociación Civil de Microbiología General
description Ostreococcus tauri is a marine picoalga, the smallest free-living eukaryotic and the simplest photosynthetic organism described to date, which has a single chloroplast and mitochondrion. The O. tauri genome codes for less than 8000 genes with low genetic redundancy, however, the pathway of starch metabolism would be conserved. This alga has all the enzymes that participate in the synthesis of starch in higher plants encoded in its genome, at least one ADPGlucose pyrophosphorylase (ADPGlc PPase), one GBSS, SSs I-III (SSI, II, and III), SBEI-II and ISA1- found. It is well known that SSIV regulates the number of starch granules in Arabidopsis and would also participate in the initiation of starch synthesis. The fact that O. tauri contains a single starch granule could be related to the lack of this enzyme. Moreover, we previously described the presence of three different isoforms of SSIII with a variable number of Starch binding domains (SBDs), suggesting that the synthesis and regulation of starch metabolism in this organism is highly complex. SBDs<br />are a special subfamily of CBMs that bind to starch and have acquired the evolutionary advantage of being able to disrupt the surface of their substrate due to the presence of two binding sites. These domains have been classified into thirteen families, in special SBDs included in CBM20 family were first found in starch hydrolases, however, they are present in several amylolytic and non-amylolytic enzymes from plants, mammals, archaea, bacteria, and fungi. In general, CBM20 are attached also to a CD and many of them have regulatory functions and a moderate affinity to starch. Only few proteins from algae containing a CBM20 have been characterized, such a laforin homolog from the red algae Chondrus crispus and a the SAGA1 protein from C. reinhardtii, which is involved in shaping starch plates. Although the O.tauri genome is fully sequenced, there are still many genes and proteins to which no function was assigned. Here, we identify the OT_ostta06g01880 gene that encodes CBM20CP, a plastid protein which contains a central carbohydrate binding domain of the CBM20 family, a coiled coil domain at the C-terminus and lacks catalytic activity. We demonstrate that CBM20CP has the ability to bind starch, amylose and amylopectin with different affinities. Furthermore, this protein interacts with OsttaSSIII-B, increasing its binding to starch granules, its catalytic efficiency and promoting granule growth. The results allow us to postulate a regulatory role for CBM20CP in starch metabolism in green algae.
publishDate 2021
dc.date.none.fl_str_mv 2021
dc.type.none.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/conferenceObject
Congreso
Journal
http://purl.org/coar/resource_type/c_5794
info:ar-repo/semantics/documentoDeConferencia
status_str publishedVersion
format conferenceObject
dc.identifier.none.fl_str_mv http://hdl.handle.net/11336/204453
CBM20CP, a novel functional protein of starch metabolism in green algae; LVII SAIB Meeting; XVI SAMIGE Meeting; Ciudad Autónoma de Buenos Aires; Argentina; 2021; 61-61
0327-9545
CONICET Digital
CONICET
url http://hdl.handle.net/11336/204453
identifier_str_mv CBM20CP, a novel functional protein of starch metabolism in green algae; LVII SAIB Meeting; XVI SAMIGE Meeting; Ciudad Autónoma de Buenos Aires; Argentina; 2021; 61-61
0327-9545
CONICET Digital
CONICET
dc.language.none.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv info:eu-repo/semantics/altIdentifier/url/http://www.samige.org.ar/admin/news/files/177-Biocell-Preprint-SAIB-SAMIGE-2021.pdf
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
https://creativecommons.org/licenses/by/2.5/ar/
eu_rights_str_mv openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by/2.5/ar/
dc.format.none.fl_str_mv application/pdf
application/pdf
dc.coverage.none.fl_str_mv Nacional
dc.publisher.none.fl_str_mv Tech Science Press
publisher.none.fl_str_mv Tech Science Press
dc.source.none.fl_str_mv reponame:CONICET Digital (CONICET)
instname:Consejo Nacional de Investigaciones Científicas y Técnicas
reponame_str CONICET Digital (CONICET)
collection CONICET Digital (CONICET)
instname_str Consejo Nacional de Investigaciones Científicas y Técnicas
repository.name.fl_str_mv CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas
repository.mail.fl_str_mv dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar
_version_ 1846083164992176128
score 13.22299