The satellite DNA AflaSAT-1 in the A and B chromosomes of the grasshopper Abracris flavolineata

Autores
Milani, Diogo; Ramos, Érica; Loreto, Vilma; Marti, Dardo Andrea; Lima Cardoso, Adauto; Moraes, Karen Cristiane Martinez de; Martins, César; Cabral de Mello, Diogo Cavalcanti
Año de publicación
2017
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
Background: Satellite DNAs (satDNAs) are organized in repetitions directly contiguous to one another, forming long arrays and composing a large portion of eukaryote genomes. These sequences evolve according to the concerted evolution model, and homogenization of repeats is observed at the intragenomic level. Satellite DNAs are the primary component of heterochromatin, located primarily in centromeres and telomeres. Moreover, satDNA enrichment in specific chromosomes has been observed, such as in B chromosomes, that can provide clues about composition, origin and evolution of this chromosome. In this study, we isolated and characterized a satDNA in A and B chromosomes of Abracris flavolineata by integrating cytogenetic, molecular and genomics approaches at intra- and inter-population levels, with the aim to understand the evolution of satDNA and composition of B chromosomes. Results: AflaSAT-1 satDNA was shared with other species and in A. flavolineata, was associated with another satDNA, AflaSAT-2. Chromosomal mapping revealed centromeric blocks variable in size in almost all chromosomes (except pair 11) of A complement for both satDNAs, whereas for B chromosome, only a small centromeric signal occurred. In distinct populations, variable number of AflaSAT-1 chromosomal sites correlated with variability in copy number. Instead of such variability, low sequence diversity was observed in A complement, but monomers from B chromosome were more variable, presenting also exclusive mutations. AflaSAT-1 was transcribed in five tissues of adults in distinct life cycle phases. Conclusions: The sharing of AflaSAT-1 with other species is consistent with the library hypothesis and indicates common origin in a common ancestor; however, AflaSAT-1 was highly amplified in the genome of A. flavolineata. At the population level, homogenization of repeats in distinct populations was documented, but dynamic expansion or elimination of repeats was also observed. Concerning the B chromosome, our data provided new information on the composition in A. flavolineata. Together with previous results, the sequences of heterochromatic nature were not likely highly amplified in the entire B chromosome. Finally, the constitutive transcriptional activity suggests a possible unknown functional role, which should be further investigated.
Fil: Milani, Diogo. Universidade Estadual Paulista Julio de Mesquita Filho; Brasil
Fil: Ramos, Érica. Universidade Estadual Paulista Julio de Mesquita Filho; Brasil
Fil: Loreto, Vilma. Universidade Federal de Pernambuco; Brasil
Fil: Marti, Dardo Andrea. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Nordeste. Instituto de Biología Subtropical. Instituto de Biología Subtropical - Nodo Posadas | Universidad Nacional de Misiones. Instituto de Biología Subtropical. Instituto de Biología Subtropical - Nodo Posadas; Argentina
Fil: Lima Cardoso, Adauto. Universidade Estadual Paulista Julio de Mesquita Filho; Brasil
Fil: Moraes, Karen Cristiane Martinez de. Universidade Estadual Paulista Julio de Mesquita Filho; Brasil
Fil: Martins, César. Universidade Estadual Paulista Julio de Mesquita Filho; Brasil
Fil: Cabral de Mello, Diogo Cavalcanti. Universidade Estadual Paulista Julio de Mesquita Filho; Brasil
Materia
B CHROMOSOME
REPETITIVE DNA
TANDEM REPEAT
TRANSCRIPTION
Nivel de accesibilidad
acceso abierto
Condiciones de uso
https://creativecommons.org/licenses/by/2.5/ar/
Repositorio
CONICET Digital (CONICET)
Institución
Consejo Nacional de Investigaciones Científicas y Técnicas
OAI Identificador
oai:ri.conicet.gov.ar:11336/89096

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oai_identifier_str oai:ri.conicet.gov.ar:11336/89096
network_acronym_str CONICETDig
repository_id_str 3498
network_name_str CONICET Digital (CONICET)
spelling The satellite DNA AflaSAT-1 in the A and B chromosomes of the grasshopper Abracris flavolineataMilani, DiogoRamos, ÉricaLoreto, VilmaMarti, Dardo AndreaLima Cardoso, AdautoMoraes, Karen Cristiane Martinez deMartins, CésarCabral de Mello, Diogo CavalcantiB CHROMOSOMEREPETITIVE DNATANDEM REPEATTRANSCRIPTIONhttps://purl.org/becyt/ford/1.6https://purl.org/becyt/ford/1Background: Satellite DNAs (satDNAs) are organized in repetitions directly contiguous to one another, forming long arrays and composing a large portion of eukaryote genomes. These sequences evolve according to the concerted evolution model, and homogenization of repeats is observed at the intragenomic level. Satellite DNAs are the primary component of heterochromatin, located primarily in centromeres and telomeres. Moreover, satDNA enrichment in specific chromosomes has been observed, such as in B chromosomes, that can provide clues about composition, origin and evolution of this chromosome. In this study, we isolated and characterized a satDNA in A and B chromosomes of Abracris flavolineata by integrating cytogenetic, molecular and genomics approaches at intra- and inter-population levels, with the aim to understand the evolution of satDNA and composition of B chromosomes. Results: AflaSAT-1 satDNA was shared with other species and in A. flavolineata, was associated with another satDNA, AflaSAT-2. Chromosomal mapping revealed centromeric blocks variable in size in almost all chromosomes (except pair 11) of A complement for both satDNAs, whereas for B chromosome, only a small centromeric signal occurred. In distinct populations, variable number of AflaSAT-1 chromosomal sites correlated with variability in copy number. Instead of such variability, low sequence diversity was observed in A complement, but monomers from B chromosome were more variable, presenting also exclusive mutations. AflaSAT-1 was transcribed in five tissues of adults in distinct life cycle phases. Conclusions: The sharing of AflaSAT-1 with other species is consistent with the library hypothesis and indicates common origin in a common ancestor; however, AflaSAT-1 was highly amplified in the genome of A. flavolineata. At the population level, homogenization of repeats in distinct populations was documented, but dynamic expansion or elimination of repeats was also observed. Concerning the B chromosome, our data provided new information on the composition in A. flavolineata. Together with previous results, the sequences of heterochromatic nature were not likely highly amplified in the entire B chromosome. Finally, the constitutive transcriptional activity suggests a possible unknown functional role, which should be further investigated.Fil: Milani, Diogo. Universidade Estadual Paulista Julio de Mesquita Filho; BrasilFil: Ramos, Érica. Universidade Estadual Paulista Julio de Mesquita Filho; BrasilFil: Loreto, Vilma. Universidade Federal de Pernambuco; BrasilFil: Marti, Dardo Andrea. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Nordeste. Instituto de Biología Subtropical. Instituto de Biología Subtropical - Nodo Posadas | Universidad Nacional de Misiones. Instituto de Biología Subtropical. Instituto de Biología Subtropical - Nodo Posadas; ArgentinaFil: Lima Cardoso, Adauto. Universidade Estadual Paulista Julio de Mesquita Filho; BrasilFil: Moraes, Karen Cristiane Martinez de. Universidade Estadual Paulista Julio de Mesquita Filho; BrasilFil: Martins, César. Universidade Estadual Paulista Julio de Mesquita Filho; BrasilFil: Cabral de Mello, Diogo Cavalcanti. Universidade Estadual Paulista Julio de Mesquita Filho; BrasilBioMed Central2017-08info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/89096Milani, Diogo; Ramos, Érica; Loreto, Vilma; Marti, Dardo Andrea; Lima Cardoso, Adauto; et al.; The satellite DNA AflaSAT-1 in the A and B chromosomes of the grasshopper Abracris flavolineata; BioMed Central; BMC Genetics; 18; 1; 8-20171471-2156CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/doi/10.1186/s12863-017-0548-9info:eu-repo/semantics/altIdentifier/url/https://bmcgenet.biomedcentral.com/articles/10.1186/s12863-017-0548-9info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-09-29T10:14:29Zoai:ri.conicet.gov.ar:11336/89096instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-09-29 10:14:29.806CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse
dc.title.none.fl_str_mv The satellite DNA AflaSAT-1 in the A and B chromosomes of the grasshopper Abracris flavolineata
title The satellite DNA AflaSAT-1 in the A and B chromosomes of the grasshopper Abracris flavolineata
spellingShingle The satellite DNA AflaSAT-1 in the A and B chromosomes of the grasshopper Abracris flavolineata
Milani, Diogo
B CHROMOSOME
REPETITIVE DNA
TANDEM REPEAT
TRANSCRIPTION
title_short The satellite DNA AflaSAT-1 in the A and B chromosomes of the grasshopper Abracris flavolineata
title_full The satellite DNA AflaSAT-1 in the A and B chromosomes of the grasshopper Abracris flavolineata
title_fullStr The satellite DNA AflaSAT-1 in the A and B chromosomes of the grasshopper Abracris flavolineata
title_full_unstemmed The satellite DNA AflaSAT-1 in the A and B chromosomes of the grasshopper Abracris flavolineata
title_sort The satellite DNA AflaSAT-1 in the A and B chromosomes of the grasshopper Abracris flavolineata
dc.creator.none.fl_str_mv Milani, Diogo
Ramos, Érica
Loreto, Vilma
Marti, Dardo Andrea
Lima Cardoso, Adauto
Moraes, Karen Cristiane Martinez de
Martins, César
Cabral de Mello, Diogo Cavalcanti
author Milani, Diogo
author_facet Milani, Diogo
Ramos, Érica
Loreto, Vilma
Marti, Dardo Andrea
Lima Cardoso, Adauto
Moraes, Karen Cristiane Martinez de
Martins, César
Cabral de Mello, Diogo Cavalcanti
author_role author
author2 Ramos, Érica
Loreto, Vilma
Marti, Dardo Andrea
Lima Cardoso, Adauto
Moraes, Karen Cristiane Martinez de
Martins, César
Cabral de Mello, Diogo Cavalcanti
author2_role author
author
author
author
author
author
author
dc.subject.none.fl_str_mv B CHROMOSOME
REPETITIVE DNA
TANDEM REPEAT
TRANSCRIPTION
topic B CHROMOSOME
REPETITIVE DNA
TANDEM REPEAT
TRANSCRIPTION
purl_subject.fl_str_mv https://purl.org/becyt/ford/1.6
https://purl.org/becyt/ford/1
dc.description.none.fl_txt_mv Background: Satellite DNAs (satDNAs) are organized in repetitions directly contiguous to one another, forming long arrays and composing a large portion of eukaryote genomes. These sequences evolve according to the concerted evolution model, and homogenization of repeats is observed at the intragenomic level. Satellite DNAs are the primary component of heterochromatin, located primarily in centromeres and telomeres. Moreover, satDNA enrichment in specific chromosomes has been observed, such as in B chromosomes, that can provide clues about composition, origin and evolution of this chromosome. In this study, we isolated and characterized a satDNA in A and B chromosomes of Abracris flavolineata by integrating cytogenetic, molecular and genomics approaches at intra- and inter-population levels, with the aim to understand the evolution of satDNA and composition of B chromosomes. Results: AflaSAT-1 satDNA was shared with other species and in A. flavolineata, was associated with another satDNA, AflaSAT-2. Chromosomal mapping revealed centromeric blocks variable in size in almost all chromosomes (except pair 11) of A complement for both satDNAs, whereas for B chromosome, only a small centromeric signal occurred. In distinct populations, variable number of AflaSAT-1 chromosomal sites correlated with variability in copy number. Instead of such variability, low sequence diversity was observed in A complement, but monomers from B chromosome were more variable, presenting also exclusive mutations. AflaSAT-1 was transcribed in five tissues of adults in distinct life cycle phases. Conclusions: The sharing of AflaSAT-1 with other species is consistent with the library hypothesis and indicates common origin in a common ancestor; however, AflaSAT-1 was highly amplified in the genome of A. flavolineata. At the population level, homogenization of repeats in distinct populations was documented, but dynamic expansion or elimination of repeats was also observed. Concerning the B chromosome, our data provided new information on the composition in A. flavolineata. Together with previous results, the sequences of heterochromatic nature were not likely highly amplified in the entire B chromosome. Finally, the constitutive transcriptional activity suggests a possible unknown functional role, which should be further investigated.
Fil: Milani, Diogo. Universidade Estadual Paulista Julio de Mesquita Filho; Brasil
Fil: Ramos, Érica. Universidade Estadual Paulista Julio de Mesquita Filho; Brasil
Fil: Loreto, Vilma. Universidade Federal de Pernambuco; Brasil
Fil: Marti, Dardo Andrea. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Nordeste. Instituto de Biología Subtropical. Instituto de Biología Subtropical - Nodo Posadas | Universidad Nacional de Misiones. Instituto de Biología Subtropical. Instituto de Biología Subtropical - Nodo Posadas; Argentina
Fil: Lima Cardoso, Adauto. Universidade Estadual Paulista Julio de Mesquita Filho; Brasil
Fil: Moraes, Karen Cristiane Martinez de. Universidade Estadual Paulista Julio de Mesquita Filho; Brasil
Fil: Martins, César. Universidade Estadual Paulista Julio de Mesquita Filho; Brasil
Fil: Cabral de Mello, Diogo Cavalcanti. Universidade Estadual Paulista Julio de Mesquita Filho; Brasil
description Background: Satellite DNAs (satDNAs) are organized in repetitions directly contiguous to one another, forming long arrays and composing a large portion of eukaryote genomes. These sequences evolve according to the concerted evolution model, and homogenization of repeats is observed at the intragenomic level. Satellite DNAs are the primary component of heterochromatin, located primarily in centromeres and telomeres. Moreover, satDNA enrichment in specific chromosomes has been observed, such as in B chromosomes, that can provide clues about composition, origin and evolution of this chromosome. In this study, we isolated and characterized a satDNA in A and B chromosomes of Abracris flavolineata by integrating cytogenetic, molecular and genomics approaches at intra- and inter-population levels, with the aim to understand the evolution of satDNA and composition of B chromosomes. Results: AflaSAT-1 satDNA was shared with other species and in A. flavolineata, was associated with another satDNA, AflaSAT-2. Chromosomal mapping revealed centromeric blocks variable in size in almost all chromosomes (except pair 11) of A complement for both satDNAs, whereas for B chromosome, only a small centromeric signal occurred. In distinct populations, variable number of AflaSAT-1 chromosomal sites correlated with variability in copy number. Instead of such variability, low sequence diversity was observed in A complement, but monomers from B chromosome were more variable, presenting also exclusive mutations. AflaSAT-1 was transcribed in five tissues of adults in distinct life cycle phases. Conclusions: The sharing of AflaSAT-1 with other species is consistent with the library hypothesis and indicates common origin in a common ancestor; however, AflaSAT-1 was highly amplified in the genome of A. flavolineata. At the population level, homogenization of repeats in distinct populations was documented, but dynamic expansion or elimination of repeats was also observed. Concerning the B chromosome, our data provided new information on the composition in A. flavolineata. Together with previous results, the sequences of heterochromatic nature were not likely highly amplified in the entire B chromosome. Finally, the constitutive transcriptional activity suggests a possible unknown functional role, which should be further investigated.
publishDate 2017
dc.date.none.fl_str_mv 2017-08
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/11336/89096
Milani, Diogo; Ramos, Érica; Loreto, Vilma; Marti, Dardo Andrea; Lima Cardoso, Adauto; et al.; The satellite DNA AflaSAT-1 in the A and B chromosomes of the grasshopper Abracris flavolineata; BioMed Central; BMC Genetics; 18; 1; 8-2017
1471-2156
CONICET Digital
CONICET
url http://hdl.handle.net/11336/89096
identifier_str_mv Milani, Diogo; Ramos, Érica; Loreto, Vilma; Marti, Dardo Andrea; Lima Cardoso, Adauto; et al.; The satellite DNA AflaSAT-1 in the A and B chromosomes of the grasshopper Abracris flavolineata; BioMed Central; BMC Genetics; 18; 1; 8-2017
1471-2156
CONICET Digital
CONICET
dc.language.none.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv info:eu-repo/semantics/altIdentifier/doi/10.1186/s12863-017-0548-9
info:eu-repo/semantics/altIdentifier/url/https://bmcgenet.biomedcentral.com/articles/10.1186/s12863-017-0548-9
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
https://creativecommons.org/licenses/by/2.5/ar/
eu_rights_str_mv openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by/2.5/ar/
dc.format.none.fl_str_mv application/pdf
application/pdf
dc.publisher.none.fl_str_mv BioMed Central
publisher.none.fl_str_mv BioMed Central
dc.source.none.fl_str_mv reponame:CONICET Digital (CONICET)
instname:Consejo Nacional de Investigaciones Científicas y Técnicas
reponame_str CONICET Digital (CONICET)
collection CONICET Digital (CONICET)
instname_str Consejo Nacional de Investigaciones Científicas y Técnicas
repository.name.fl_str_mv CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas
repository.mail.fl_str_mv dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar
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