Intra- and interspecific divergence in the nuclear sequences of the clock gene period in species of the Drosophila buzzatii cluster
- Autores
- Franco, Fernando Faria; Silva Bernardi, Erica Cristina Carvalho; Sene, Fabio Melo; Hasson, Esteban Ruben; Manfrin, Maura Helena
- Año de publicación
- 2010
- Idioma
- inglés
- Tipo de recurso
- artículo
- Estado
- versión publicada
- Descripción
- We have measured nucleotide variation in the CLOCK/CYCLE heterodimer inhibition domain (CCID) of the clock X-linked gene period in seven species belonging to the Drosophila buzzatii cluster, namely D. buzzatii, Drosophila koepferae, Drosophila antonietae, Drosophila serido, Drosophila gouveai, Drosophila seriema and Drosophila borborema. We detected that the purifying selection is the main force driving the sequence evolution in period, in agreement with the important role of CCID in clock machinery. Our survey revealed that period provides valuable phylogenetic information that allowed to resolve phylogenetic relationships among D. gouveai, D. borborema and D. seriema, which composed a polytomic clade in preliminary studies. The analysis of patterns of intraspecific variation revealed two different lineages of period in D. koepferae, probably reflecting introgressive hybridization from D. buzzatii, in concordance with previous molecular data.
Fil: Franco, Fernando Faria. Universidade Federal do São Carlos; Brasil
Fil: Silva Bernardi, Erica Cristina Carvalho. Universidade de Sao Paulo; Brasil
Fil: Sene, Fabio Melo. Universidade de Sao Paulo; Brasil
Fil: Hasson, Esteban Ruben. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Ecología, Genética y Evolución de Buenos Aires. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Ecología, Genética y Evolución de Buenos Aires; Argentina
Fil: Manfrin, Maura Helena. Universidade de Sao Paulo; Brasil - Materia
-
Clock Genes
D. Buzzatii Cluster
Drosophila Repleta Group
Period Gene
Phylogeny - Nivel de accesibilidad
- acceso abierto
- Condiciones de uso
- https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
- Repositorio
- Institución
- Consejo Nacional de Investigaciones Científicas y Técnicas
- OAI Identificador
- oai:ri.conicet.gov.ar:11336/68705
Ver los metadatos del registro completo
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spelling |
Intra- and interspecific divergence in the nuclear sequences of the clock gene period in species of the Drosophila buzzatii clusterDivergencia inter y intraespecifica en las secuencias nucleares del gene period en las especies del “cluster”Drosophila buzzatiiFranco, Fernando FariaSilva Bernardi, Erica Cristina CarvalhoSene, Fabio MeloHasson, Esteban RubenManfrin, Maura HelenaClock GenesD. Buzzatii ClusterDrosophila Repleta GroupPeriod GenePhylogenyhttps://purl.org/becyt/ford/1.6https://purl.org/becyt/ford/1We have measured nucleotide variation in the CLOCK/CYCLE heterodimer inhibition domain (CCID) of the clock X-linked gene period in seven species belonging to the Drosophila buzzatii cluster, namely D. buzzatii, Drosophila koepferae, Drosophila antonietae, Drosophila serido, Drosophila gouveai, Drosophila seriema and Drosophila borborema. We detected that the purifying selection is the main force driving the sequence evolution in period, in agreement with the important role of CCID in clock machinery. Our survey revealed that period provides valuable phylogenetic information that allowed to resolve phylogenetic relationships among D. gouveai, D. borborema and D. seriema, which composed a polytomic clade in preliminary studies. The analysis of patterns of intraspecific variation revealed two different lineages of period in D. koepferae, probably reflecting introgressive hybridization from D. buzzatii, in concordance with previous molecular data.Fil: Franco, Fernando Faria. Universidade Federal do São Carlos; BrasilFil: Silva Bernardi, Erica Cristina Carvalho. Universidade de Sao Paulo; BrasilFil: Sene, Fabio Melo. Universidade de Sao Paulo; BrasilFil: Hasson, Esteban Ruben. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Ecología, Genética y Evolución de Buenos Aires. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Ecología, Genética y Evolución de Buenos Aires; ArgentinaFil: Manfrin, Maura Helena. Universidade de Sao Paulo; BrasilWiley Blackwell Publishing, Inc2010-11info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/68705Franco, Fernando Faria; Silva Bernardi, Erica Cristina Carvalho; Sene, Fabio Melo; Hasson, Esteban Ruben; Manfrin, Maura Helena; Intra- and interspecific divergence in the nuclear sequences of the clock gene period in species of the Drosophila buzzatii cluster; Wiley Blackwell Publishing, Inc; Journal of Zoological Systematics and Evolutionary Research; 48; 4; 11-2010; 322-3310947-5745CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/doi/10.1111/j.1439-0469.2010.00564.xinfo:eu-repo/semantics/altIdentifier/url/https://onlinelibrary.wiley.com/doi/pdf/10.1111/j.1439-0469.2010.00564.xinfo:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-sa/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-09-29T10:10:57Zoai:ri.conicet.gov.ar:11336/68705instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-09-29 10:10:58.277CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse |
dc.title.none.fl_str_mv |
Intra- and interspecific divergence in the nuclear sequences of the clock gene period in species of the Drosophila buzzatii cluster Divergencia inter y intraespecifica en las secuencias nucleares del gene period en las especies del “cluster”Drosophila buzzatii |
title |
Intra- and interspecific divergence in the nuclear sequences of the clock gene period in species of the Drosophila buzzatii cluster |
spellingShingle |
Intra- and interspecific divergence in the nuclear sequences of the clock gene period in species of the Drosophila buzzatii cluster Franco, Fernando Faria Clock Genes D. Buzzatii Cluster Drosophila Repleta Group Period Gene Phylogeny |
title_short |
Intra- and interspecific divergence in the nuclear sequences of the clock gene period in species of the Drosophila buzzatii cluster |
title_full |
Intra- and interspecific divergence in the nuclear sequences of the clock gene period in species of the Drosophila buzzatii cluster |
title_fullStr |
Intra- and interspecific divergence in the nuclear sequences of the clock gene period in species of the Drosophila buzzatii cluster |
title_full_unstemmed |
Intra- and interspecific divergence in the nuclear sequences of the clock gene period in species of the Drosophila buzzatii cluster |
title_sort |
Intra- and interspecific divergence in the nuclear sequences of the clock gene period in species of the Drosophila buzzatii cluster |
dc.creator.none.fl_str_mv |
Franco, Fernando Faria Silva Bernardi, Erica Cristina Carvalho Sene, Fabio Melo Hasson, Esteban Ruben Manfrin, Maura Helena |
author |
Franco, Fernando Faria |
author_facet |
Franco, Fernando Faria Silva Bernardi, Erica Cristina Carvalho Sene, Fabio Melo Hasson, Esteban Ruben Manfrin, Maura Helena |
author_role |
author |
author2 |
Silva Bernardi, Erica Cristina Carvalho Sene, Fabio Melo Hasson, Esteban Ruben Manfrin, Maura Helena |
author2_role |
author author author author |
dc.subject.none.fl_str_mv |
Clock Genes D. Buzzatii Cluster Drosophila Repleta Group Period Gene Phylogeny |
topic |
Clock Genes D. Buzzatii Cluster Drosophila Repleta Group Period Gene Phylogeny |
purl_subject.fl_str_mv |
https://purl.org/becyt/ford/1.6 https://purl.org/becyt/ford/1 |
dc.description.none.fl_txt_mv |
We have measured nucleotide variation in the CLOCK/CYCLE heterodimer inhibition domain (CCID) of the clock X-linked gene period in seven species belonging to the Drosophila buzzatii cluster, namely D. buzzatii, Drosophila koepferae, Drosophila antonietae, Drosophila serido, Drosophila gouveai, Drosophila seriema and Drosophila borborema. We detected that the purifying selection is the main force driving the sequence evolution in period, in agreement with the important role of CCID in clock machinery. Our survey revealed that period provides valuable phylogenetic information that allowed to resolve phylogenetic relationships among D. gouveai, D. borborema and D. seriema, which composed a polytomic clade in preliminary studies. The analysis of patterns of intraspecific variation revealed two different lineages of period in D. koepferae, probably reflecting introgressive hybridization from D. buzzatii, in concordance with previous molecular data. Fil: Franco, Fernando Faria. Universidade Federal do São Carlos; Brasil Fil: Silva Bernardi, Erica Cristina Carvalho. Universidade de Sao Paulo; Brasil Fil: Sene, Fabio Melo. Universidade de Sao Paulo; Brasil Fil: Hasson, Esteban Ruben. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Ecología, Genética y Evolución de Buenos Aires. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Ecología, Genética y Evolución de Buenos Aires; Argentina Fil: Manfrin, Maura Helena. Universidade de Sao Paulo; Brasil |
description |
We have measured nucleotide variation in the CLOCK/CYCLE heterodimer inhibition domain (CCID) of the clock X-linked gene period in seven species belonging to the Drosophila buzzatii cluster, namely D. buzzatii, Drosophila koepferae, Drosophila antonietae, Drosophila serido, Drosophila gouveai, Drosophila seriema and Drosophila borborema. We detected that the purifying selection is the main force driving the sequence evolution in period, in agreement with the important role of CCID in clock machinery. Our survey revealed that period provides valuable phylogenetic information that allowed to resolve phylogenetic relationships among D. gouveai, D. borborema and D. seriema, which composed a polytomic clade in preliminary studies. The analysis of patterns of intraspecific variation revealed two different lineages of period in D. koepferae, probably reflecting introgressive hybridization from D. buzzatii, in concordance with previous molecular data. |
publishDate |
2010 |
dc.date.none.fl_str_mv |
2010-11 |
dc.type.none.fl_str_mv |
info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion http://purl.org/coar/resource_type/c_6501 info:ar-repo/semantics/articulo |
format |
article |
status_str |
publishedVersion |
dc.identifier.none.fl_str_mv |
http://hdl.handle.net/11336/68705 Franco, Fernando Faria; Silva Bernardi, Erica Cristina Carvalho; Sene, Fabio Melo; Hasson, Esteban Ruben; Manfrin, Maura Helena; Intra- and interspecific divergence in the nuclear sequences of the clock gene period in species of the Drosophila buzzatii cluster; Wiley Blackwell Publishing, Inc; Journal of Zoological Systematics and Evolutionary Research; 48; 4; 11-2010; 322-331 0947-5745 CONICET Digital CONICET |
url |
http://hdl.handle.net/11336/68705 |
identifier_str_mv |
Franco, Fernando Faria; Silva Bernardi, Erica Cristina Carvalho; Sene, Fabio Melo; Hasson, Esteban Ruben; Manfrin, Maura Helena; Intra- and interspecific divergence in the nuclear sequences of the clock gene period in species of the Drosophila buzzatii cluster; Wiley Blackwell Publishing, Inc; Journal of Zoological Systematics and Evolutionary Research; 48; 4; 11-2010; 322-331 0947-5745 CONICET Digital CONICET |
dc.language.none.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
info:eu-repo/semantics/altIdentifier/doi/10.1111/j.1439-0469.2010.00564.x info:eu-repo/semantics/altIdentifier/url/https://onlinelibrary.wiley.com/doi/pdf/10.1111/j.1439-0469.2010.00564.x |
dc.rights.none.fl_str_mv |
info:eu-repo/semantics/openAccess https://creativecommons.org/licenses/by-nc-sa/2.5/ar/ |
eu_rights_str_mv |
openAccess |
rights_invalid_str_mv |
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/ |
dc.format.none.fl_str_mv |
application/pdf application/pdf |
dc.publisher.none.fl_str_mv |
Wiley Blackwell Publishing, Inc |
publisher.none.fl_str_mv |
Wiley Blackwell Publishing, Inc |
dc.source.none.fl_str_mv |
reponame:CONICET Digital (CONICET) instname:Consejo Nacional de Investigaciones Científicas y Técnicas |
reponame_str |
CONICET Digital (CONICET) |
collection |
CONICET Digital (CONICET) |
instname_str |
Consejo Nacional de Investigaciones Científicas y Técnicas |
repository.name.fl_str_mv |
CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas |
repository.mail.fl_str_mv |
dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar |
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1844614004089028608 |
score |
13.070432 |