Intra- and interspecific divergence in the nuclear sequences of the clock gene period in species of the Drosophila buzzatii cluster

Autores
Franco, Fernando Faria; Silva Bernardi, Erica Cristina Carvalho; Sene, Fabio Melo; Hasson, Esteban Ruben; Manfrin, Maura Helena
Año de publicación
2010
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
We have measured nucleotide variation in the CLOCK/CYCLE heterodimer inhibition domain (CCID) of the clock X-linked gene period in seven species belonging to the Drosophila buzzatii cluster, namely D. buzzatii, Drosophila koepferae, Drosophila antonietae, Drosophila serido, Drosophila gouveai, Drosophila seriema and Drosophila borborema. We detected that the purifying selection is the main force driving the sequence evolution in period, in agreement with the important role of CCID in clock machinery. Our survey revealed that period provides valuable phylogenetic information that allowed to resolve phylogenetic relationships among D. gouveai, D. borborema and D. seriema, which composed a polytomic clade in preliminary studies. The analysis of patterns of intraspecific variation revealed two different lineages of period in D. koepferae, probably reflecting introgressive hybridization from D. buzzatii, in concordance with previous molecular data.
Fil: Franco, Fernando Faria. Universidade Federal do São Carlos; Brasil
Fil: Silva Bernardi, Erica Cristina Carvalho. Universidade de Sao Paulo; Brasil
Fil: Sene, Fabio Melo. Universidade de Sao Paulo; Brasil
Fil: Hasson, Esteban Ruben. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Ecología, Genética y Evolución de Buenos Aires. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Ecología, Genética y Evolución de Buenos Aires; Argentina
Fil: Manfrin, Maura Helena. Universidade de Sao Paulo; Brasil
Materia
Clock Genes
D. Buzzatii Cluster
Drosophila Repleta Group
Period Gene
Phylogeny
Nivel de accesibilidad
acceso abierto
Condiciones de uso
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
Repositorio
CONICET Digital (CONICET)
Institución
Consejo Nacional de Investigaciones Científicas y Técnicas
OAI Identificador
oai:ri.conicet.gov.ar:11336/68705
Acceder
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oai_identifier_str oai:ri.conicet.gov.ar:11336/68705
network_acronym_str CONICETDig
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network_name_str CONICET Digital (CONICET)
spelling Intra- and interspecific divergence in the nuclear sequences of the clock gene period in species of the Drosophila buzzatii clusterDivergencia inter y intraespecifica en las secuencias nucleares del gene period en las especies del “cluster”Drosophila buzzatiiFranco, Fernando FariaSilva Bernardi, Erica Cristina CarvalhoSene, Fabio MeloHasson, Esteban RubenManfrin, Maura HelenaClock GenesD. Buzzatii ClusterDrosophila Repleta GroupPeriod GenePhylogenyhttps://purl.org/becyt/ford/1.6https://purl.org/becyt/ford/1We have measured nucleotide variation in the CLOCK/CYCLE heterodimer inhibition domain (CCID) of the clock X-linked gene period in seven species belonging to the Drosophila buzzatii cluster, namely D. buzzatii, Drosophila koepferae, Drosophila antonietae, Drosophila serido, Drosophila gouveai, Drosophila seriema and Drosophila borborema. We detected that the purifying selection is the main force driving the sequence evolution in period, in agreement with the important role of CCID in clock machinery. Our survey revealed that period provides valuable phylogenetic information that allowed to resolve phylogenetic relationships among D. gouveai, D. borborema and D. seriema, which composed a polytomic clade in preliminary studies. The analysis of patterns of intraspecific variation revealed two different lineages of period in D. koepferae, probably reflecting introgressive hybridization from D. buzzatii, in concordance with previous molecular data.Fil: Franco, Fernando Faria. Universidade Federal do São Carlos; BrasilFil: Silva Bernardi, Erica Cristina Carvalho. Universidade de Sao Paulo; BrasilFil: Sene, Fabio Melo. Universidade de Sao Paulo; BrasilFil: Hasson, Esteban Ruben. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Ecología, Genética y Evolución de Buenos Aires. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Ecología, Genética y Evolución de Buenos Aires; ArgentinaFil: Manfrin, Maura Helena. Universidade de Sao Paulo; BrasilWiley Blackwell Publishing, Inc2010-11info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/68705Franco, Fernando Faria; Silva Bernardi, Erica Cristina Carvalho; Sene, Fabio Melo; Hasson, Esteban Ruben; Manfrin, Maura Helena; Intra- and interspecific divergence in the nuclear sequences of the clock gene period in species of the Drosophila buzzatii cluster; Wiley Blackwell Publishing, Inc; Journal of Zoological Systematics and Evolutionary Research; 48; 4; 11-2010; 322-3310947-5745CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/doi/10.1111/j.1439-0469.2010.00564.xinfo:eu-repo/semantics/altIdentifier/url/https://onlinelibrary.wiley.com/doi/pdf/10.1111/j.1439-0469.2010.00564.xinfo:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-sa/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-10-22T11:40:55Zoai:ri.conicet.gov.ar:11336/68705instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-10-22 11:40:55.66CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse
dc.title.none.fl_str_mv Intra- and interspecific divergence in the nuclear sequences of the clock gene period in species of the Drosophila buzzatii cluster
Divergencia inter y intraespecifica en las secuencias nucleares del gene period en las especies del “cluster”Drosophila buzzatii
title Intra- and interspecific divergence in the nuclear sequences of the clock gene period in species of the Drosophila buzzatii cluster
spellingShingle Intra- and interspecific divergence in the nuclear sequences of the clock gene period in species of the Drosophila buzzatii cluster
Franco, Fernando Faria
Clock Genes
D. Buzzatii Cluster
Drosophila Repleta Group
Period Gene
Phylogeny
title_short Intra- and interspecific divergence in the nuclear sequences of the clock gene period in species of the Drosophila buzzatii cluster
title_full Intra- and interspecific divergence in the nuclear sequences of the clock gene period in species of the Drosophila buzzatii cluster
title_fullStr Intra- and interspecific divergence in the nuclear sequences of the clock gene period in species of the Drosophila buzzatii cluster
title_full_unstemmed Intra- and interspecific divergence in the nuclear sequences of the clock gene period in species of the Drosophila buzzatii cluster
title_sort Intra- and interspecific divergence in the nuclear sequences of the clock gene period in species of the Drosophila buzzatii cluster
dc.creator.none.fl_str_mv Franco, Fernando Faria
Silva Bernardi, Erica Cristina Carvalho
Sene, Fabio Melo
Hasson, Esteban Ruben
Manfrin, Maura Helena
author Franco, Fernando Faria
author_facet Franco, Fernando Faria
Silva Bernardi, Erica Cristina Carvalho
Sene, Fabio Melo
Hasson, Esteban Ruben
Manfrin, Maura Helena
author_role author
author2 Silva Bernardi, Erica Cristina Carvalho
Sene, Fabio Melo
Hasson, Esteban Ruben
Manfrin, Maura Helena
author2_role author
author
author
author
dc.subject.none.fl_str_mv Clock Genes
D. Buzzatii Cluster
Drosophila Repleta Group
Period Gene
Phylogeny
topic Clock Genes
D. Buzzatii Cluster
Drosophila Repleta Group
Period Gene
Phylogeny
purl_subject.fl_str_mv https://purl.org/becyt/ford/1.6
https://purl.org/becyt/ford/1
dc.description.none.fl_txt_mv We have measured nucleotide variation in the CLOCK/CYCLE heterodimer inhibition domain (CCID) of the clock X-linked gene period in seven species belonging to the Drosophila buzzatii cluster, namely D. buzzatii, Drosophila koepferae, Drosophila antonietae, Drosophila serido, Drosophila gouveai, Drosophila seriema and Drosophila borborema. We detected that the purifying selection is the main force driving the sequence evolution in period, in agreement with the important role of CCID in clock machinery. Our survey revealed that period provides valuable phylogenetic information that allowed to resolve phylogenetic relationships among D. gouveai, D. borborema and D. seriema, which composed a polytomic clade in preliminary studies. The analysis of patterns of intraspecific variation revealed two different lineages of period in D. koepferae, probably reflecting introgressive hybridization from D. buzzatii, in concordance with previous molecular data.
Fil: Franco, Fernando Faria. Universidade Federal do São Carlos; Brasil
Fil: Silva Bernardi, Erica Cristina Carvalho. Universidade de Sao Paulo; Brasil
Fil: Sene, Fabio Melo. Universidade de Sao Paulo; Brasil
Fil: Hasson, Esteban Ruben. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Ecología, Genética y Evolución de Buenos Aires. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Ecología, Genética y Evolución de Buenos Aires; Argentina
Fil: Manfrin, Maura Helena. Universidade de Sao Paulo; Brasil
description We have measured nucleotide variation in the CLOCK/CYCLE heterodimer inhibition domain (CCID) of the clock X-linked gene period in seven species belonging to the Drosophila buzzatii cluster, namely D. buzzatii, Drosophila koepferae, Drosophila antonietae, Drosophila serido, Drosophila gouveai, Drosophila seriema and Drosophila borborema. We detected that the purifying selection is the main force driving the sequence evolution in period, in agreement with the important role of CCID in clock machinery. Our survey revealed that period provides valuable phylogenetic information that allowed to resolve phylogenetic relationships among D. gouveai, D. borborema and D. seriema, which composed a polytomic clade in preliminary studies. The analysis of patterns of intraspecific variation revealed two different lineages of period in D. koepferae, probably reflecting introgressive hybridization from D. buzzatii, in concordance with previous molecular data.
publishDate 2010
dc.date.none.fl_str_mv 2010-11
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/11336/68705
Franco, Fernando Faria; Silva Bernardi, Erica Cristina Carvalho; Sene, Fabio Melo; Hasson, Esteban Ruben; Manfrin, Maura Helena; Intra- and interspecific divergence in the nuclear sequences of the clock gene period in species of the Drosophila buzzatii cluster; Wiley Blackwell Publishing, Inc; Journal of Zoological Systematics and Evolutionary Research; 48; 4; 11-2010; 322-331
0947-5745
CONICET Digital
CONICET
url http://hdl.handle.net/11336/68705
identifier_str_mv Franco, Fernando Faria; Silva Bernardi, Erica Cristina Carvalho; Sene, Fabio Melo; Hasson, Esteban Ruben; Manfrin, Maura Helena; Intra- and interspecific divergence in the nuclear sequences of the clock gene period in species of the Drosophila buzzatii cluster; Wiley Blackwell Publishing, Inc; Journal of Zoological Systematics and Evolutionary Research; 48; 4; 11-2010; 322-331
0947-5745
CONICET Digital
CONICET
dc.language.none.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv info:eu-repo/semantics/altIdentifier/doi/10.1111/j.1439-0469.2010.00564.x
info:eu-repo/semantics/altIdentifier/url/https://onlinelibrary.wiley.com/doi/pdf/10.1111/j.1439-0469.2010.00564.x
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
eu_rights_str_mv openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
dc.format.none.fl_str_mv application/pdf
application/pdf
dc.publisher.none.fl_str_mv Wiley Blackwell Publishing, Inc
publisher.none.fl_str_mv Wiley Blackwell Publishing, Inc
dc.source.none.fl_str_mv reponame:CONICET Digital (CONICET)
instname:Consejo Nacional de Investigaciones Científicas y Técnicas
reponame_str CONICET Digital (CONICET)
collection CONICET Digital (CONICET)
instname_str Consejo Nacional de Investigaciones Científicas y Técnicas
repository.name.fl_str_mv CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas
repository.mail.fl_str_mv dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar
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score 12.982451

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