Proteome radiolabeling assays reveal that infection of thp1 macrophages with different bacteria up-regulates a novel cytosolic variant of an er chaperone, showing a pireducing ptm...

Autores
Asensio, Cristian Jorge Alejandro; Myers, Michael P.; Baralle, Francisco E.; García, Rodolfo C.
Año de publicación
2023
Idioma
inglés
Tipo de recurso
documento de conferencia
Estado
versión publicada
Descripción
Finding proteins altered in level/PTMs during bacterial infection in macrophages requires sensitive screening protocols in gels, outperforming dyes. We searched cytosolic proteins altered in a time-dependent, sustained manner, at days 1-4 post-infection (pi). Thus, we optimized cell-free, in vitro radiolabeling (IVR) assays of cytosolic proteomes of THP1 cells to covalently label some proteins with P-32. Proteomes were resolved by 1D/2D gels to detect bands/spots with altered IVR. 3-4 experiments were performed per condition. Interesting proteins were identified by MS. Bibliometric and informatic studies were initiated to interpret the findings. RESULTS: After infection with Mycobacterium avium, a labeled 78 KDa band, p78, was always upregulated at day 1 pi, equally by live or heat-killed bacteria. Time-course infection experiments revealed that live bacteria sustained p78 longer, with a 2-fold difference with killed, at day 4. So, p78 was sustained by live intracellular bacteria. The p78 spot had pI=3.9 in 2D gels. A stained spot was identified by MS as HSPA5, an ER chaperone (normal pI=5.3). So, p78 was an ultra-acidic, cytosolic, charge variant of HSPA5, but with similar mobility in gels. p78 was upregulated at day 1 also by 2 gram-negative bacteria (live or killed). Thus, p78 was likely a conserved cell response to heat-resistant molecules of different bacteria. Since it did suggest participation of TLRs, we treated cells with pure TLR2 ligands like lipopeptides, LTA, etc., upregulating p78 again. Contrary to the normal HSPA5 precursor, p78 was ER-stress independent. So, p78 might arise from a minor precursor pool after addition of a PTM. p78 was undetectable in WB and IVR outperformed silver and dyes in sensitivity. We improved the IVR to monitor p78 only in 1D gels and identified a kinase labeling p78 by IVR (did not label HSPA5). Taxol treatment revealed that microtubules were involved with p78. LPS as TLR4 ligand did not generate p78. TLR2 negative HeLa cells had no upregulation. The 1.4 pH units shift, without intermediate spots, would imply a single-step polyanionic PTM, incompatible with multisite phosphorylation. Besides, a phosphate-binding dye did not detect p78. So far, the PTM escaped MS identification. We conclude that any candidate PTM should comply these characteristics: a) be poly-anionic and/or neutralize many basic HSPA5 residues, b) generate a reproducible pI reduction, maintaining equal mobility, c) compatibility with the spatiotemporal aspects of the upregulation plus association to microtubules, d) TLR2 ligation dependency, e) ER-stress and ligand-structure independency, f) if more than 1 enzyme is involved, they should be spatiotemporally coordinated. We discuss the literature about candidate PTMs, together with reports of other HSPA5 forms. p78 in THP1 is a reproducible biomarker useful to compare different TLR2 ligands and bacteria and deserves more studies about its roles in innate immune responses and its PTM.
Fil: Asensio, Cristian Jorge Alejandro. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tandil. Centro de Investigación Veterinaria de Tandil. Universidad Nacional del Centro de la Provincia de Buenos Aires. Centro de Investigación Veterinaria de Tandil. Provincia de Buenos Aires. Gobernación. Comision de Investigaciones Científicas. Centro de Investigación Veterinaria de Tandil; Argentina. International Centre for Genetic Engineering and Biotechnology; Italia
Fil: Myers, Michael P.. International Centre for Genetic Engineering and Biotechnology; Italia
Fil: Baralle, Francisco E.. International Centre for Genetic Engineering and Biotechnology; Italia
Fil: García, Rodolfo C.. International Centre for Genetic Engineering and Biotechnology; Italia
LXXI Reunión Científica Anual de la Sociedad Argentina de Inmunología
San Luis
Argentina
Sociedad Argentina de Inmunología
Universidad Nacional de San Luis
Materia
PROTEOME
ASSAYS
INFECTION
MACROPHAGES
CHAPERONE
TLR
MICROTUBULES
BACTERIAL
MYCOBACTERIAL
PTM
Nivel de accesibilidad
acceso abierto
Condiciones de uso
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
Repositorio
CONICET Digital (CONICET)
Institución
Consejo Nacional de Investigaciones Científicas y Técnicas
OAI Identificador
oai:ri.conicet.gov.ar:11336/242162

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oai_identifier_str oai:ri.conicet.gov.ar:11336/242162
network_acronym_str CONICETDig
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network_name_str CONICET Digital (CONICET)
spelling Proteome radiolabeling assays reveal that infection of thp1 macrophages with different bacteria up-regulates a novel cytosolic variant of an er chaperone, showing a pireducing ptm of unknown structure. dependency on tlr2- ligation and microtubuleAsensio, Cristian Jorge AlejandroMyers, Michael P.Baralle, Francisco E.García, Rodolfo C.PROTEOMEASSAYSINFECTIONMACROPHAGESCHAPERONETLRMICROTUBULESBACTERIALMYCOBACTERIALPTMhttps://purl.org/becyt/ford/1.6https://purl.org/becyt/ford/1Finding proteins altered in level/PTMs during bacterial infection in macrophages requires sensitive screening protocols in gels, outperforming dyes. We searched cytosolic proteins altered in a time-dependent, sustained manner, at days 1-4 post-infection (pi). Thus, we optimized cell-free, in vitro radiolabeling (IVR) assays of cytosolic proteomes of THP1 cells to covalently label some proteins with P-32. Proteomes were resolved by 1D/2D gels to detect bands/spots with altered IVR. 3-4 experiments were performed per condition. Interesting proteins were identified by MS. Bibliometric and informatic studies were initiated to interpret the findings. RESULTS: After infection with Mycobacterium avium, a labeled 78 KDa band, p78, was always upregulated at day 1 pi, equally by live or heat-killed bacteria. Time-course infection experiments revealed that live bacteria sustained p78 longer, with a 2-fold difference with killed, at day 4. So, p78 was sustained by live intracellular bacteria. The p78 spot had pI=3.9 in 2D gels. A stained spot was identified by MS as HSPA5, an ER chaperone (normal pI=5.3). So, p78 was an ultra-acidic, cytosolic, charge variant of HSPA5, but with similar mobility in gels. p78 was upregulated at day 1 also by 2 gram-negative bacteria (live or killed). Thus, p78 was likely a conserved cell response to heat-resistant molecules of different bacteria. Since it did suggest participation of TLRs, we treated cells with pure TLR2 ligands like lipopeptides, LTA, etc., upregulating p78 again. Contrary to the normal HSPA5 precursor, p78 was ER-stress independent. So, p78 might arise from a minor precursor pool after addition of a PTM. p78 was undetectable in WB and IVR outperformed silver and dyes in sensitivity. We improved the IVR to monitor p78 only in 1D gels and identified a kinase labeling p78 by IVR (did not label HSPA5). Taxol treatment revealed that microtubules were involved with p78. LPS as TLR4 ligand did not generate p78. TLR2 negative HeLa cells had no upregulation. The 1.4 pH units shift, without intermediate spots, would imply a single-step polyanionic PTM, incompatible with multisite phosphorylation. Besides, a phosphate-binding dye did not detect p78. So far, the PTM escaped MS identification. We conclude that any candidate PTM should comply these characteristics: a) be poly-anionic and/or neutralize many basic HSPA5 residues, b) generate a reproducible pI reduction, maintaining equal mobility, c) compatibility with the spatiotemporal aspects of the upregulation plus association to microtubules, d) TLR2 ligation dependency, e) ER-stress and ligand-structure independency, f) if more than 1 enzyme is involved, they should be spatiotemporally coordinated. We discuss the literature about candidate PTMs, together with reports of other HSPA5 forms. p78 in THP1 is a reproducible biomarker useful to compare different TLR2 ligands and bacteria and deserves more studies about its roles in innate immune responses and its PTM.Fil: Asensio, Cristian Jorge Alejandro. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tandil. Centro de Investigación Veterinaria de Tandil. Universidad Nacional del Centro de la Provincia de Buenos Aires. Centro de Investigación Veterinaria de Tandil. Provincia de Buenos Aires. Gobernación. Comision de Investigaciones Científicas. Centro de Investigación Veterinaria de Tandil; Argentina. International Centre for Genetic Engineering and Biotechnology; ItaliaFil: Myers, Michael P.. International Centre for Genetic Engineering and Biotechnology; ItaliaFil: Baralle, Francisco E.. International Centre for Genetic Engineering and Biotechnology; ItaliaFil: García, Rodolfo C.. International Centre for Genetic Engineering and Biotechnology; ItaliaLXXI Reunión Científica Anual de la Sociedad Argentina de InmunologíaSan LuisArgentinaSociedad Argentina de InmunologíaUniversidad Nacional de San LuisUniversidad Nacional de San Luis2023info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/conferenceObjectReuniónBookhttp://purl.org/coar/resource_type/c_5794info:ar-repo/semantics/documentoDeConferenciaapplication/pdfapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/242162Proteome radiolabeling assays reveal that infection of thp1 macrophages with different bacteria up-regulates a novel cytosolic variant of an er chaperone, showing a pireducing ptm of unknown structure. dependency on tlr2- ligation and microtubule; LXXI Reunión Científica Anual de la Sociedad Argentina de Inmunología; San Luis; Argentina; 2023; 131978-987-733-386-2CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/url/https://inmunologia.org.ar/wp-content/uploads/2023/11/Libro-de-Resumenes-LXXI-Reunion-SAI-2023.pdfNacionalinfo:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-sa/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-10-15T14:21:40Zoai:ri.conicet.gov.ar:11336/242162instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-10-15 14:21:40.718CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse
dc.title.none.fl_str_mv Proteome radiolabeling assays reveal that infection of thp1 macrophages with different bacteria up-regulates a novel cytosolic variant of an er chaperone, showing a pireducing ptm of unknown structure. dependency on tlr2- ligation and microtubule
title Proteome radiolabeling assays reveal that infection of thp1 macrophages with different bacteria up-regulates a novel cytosolic variant of an er chaperone, showing a pireducing ptm of unknown structure. dependency on tlr2- ligation and microtubule
spellingShingle Proteome radiolabeling assays reveal that infection of thp1 macrophages with different bacteria up-regulates a novel cytosolic variant of an er chaperone, showing a pireducing ptm of unknown structure. dependency on tlr2- ligation and microtubule
Asensio, Cristian Jorge Alejandro
PROTEOME
ASSAYS
INFECTION
MACROPHAGES
CHAPERONE
TLR
MICROTUBULES
BACTERIAL
MYCOBACTERIAL
PTM
title_short Proteome radiolabeling assays reveal that infection of thp1 macrophages with different bacteria up-regulates a novel cytosolic variant of an er chaperone, showing a pireducing ptm of unknown structure. dependency on tlr2- ligation and microtubule
title_full Proteome radiolabeling assays reveal that infection of thp1 macrophages with different bacteria up-regulates a novel cytosolic variant of an er chaperone, showing a pireducing ptm of unknown structure. dependency on tlr2- ligation and microtubule
title_fullStr Proteome radiolabeling assays reveal that infection of thp1 macrophages with different bacteria up-regulates a novel cytosolic variant of an er chaperone, showing a pireducing ptm of unknown structure. dependency on tlr2- ligation and microtubule
title_full_unstemmed Proteome radiolabeling assays reveal that infection of thp1 macrophages with different bacteria up-regulates a novel cytosolic variant of an er chaperone, showing a pireducing ptm of unknown structure. dependency on tlr2- ligation and microtubule
title_sort Proteome radiolabeling assays reveal that infection of thp1 macrophages with different bacteria up-regulates a novel cytosolic variant of an er chaperone, showing a pireducing ptm of unknown structure. dependency on tlr2- ligation and microtubule
dc.creator.none.fl_str_mv Asensio, Cristian Jorge Alejandro
Myers, Michael P.
Baralle, Francisco E.
García, Rodolfo C.
author Asensio, Cristian Jorge Alejandro
author_facet Asensio, Cristian Jorge Alejandro
Myers, Michael P.
Baralle, Francisco E.
García, Rodolfo C.
author_role author
author2 Myers, Michael P.
Baralle, Francisco E.
García, Rodolfo C.
author2_role author
author
author
dc.subject.none.fl_str_mv PROTEOME
ASSAYS
INFECTION
MACROPHAGES
CHAPERONE
TLR
MICROTUBULES
BACTERIAL
MYCOBACTERIAL
PTM
topic PROTEOME
ASSAYS
INFECTION
MACROPHAGES
CHAPERONE
TLR
MICROTUBULES
BACTERIAL
MYCOBACTERIAL
PTM
purl_subject.fl_str_mv https://purl.org/becyt/ford/1.6
https://purl.org/becyt/ford/1
dc.description.none.fl_txt_mv Finding proteins altered in level/PTMs during bacterial infection in macrophages requires sensitive screening protocols in gels, outperforming dyes. We searched cytosolic proteins altered in a time-dependent, sustained manner, at days 1-4 post-infection (pi). Thus, we optimized cell-free, in vitro radiolabeling (IVR) assays of cytosolic proteomes of THP1 cells to covalently label some proteins with P-32. Proteomes were resolved by 1D/2D gels to detect bands/spots with altered IVR. 3-4 experiments were performed per condition. Interesting proteins were identified by MS. Bibliometric and informatic studies were initiated to interpret the findings. RESULTS: After infection with Mycobacterium avium, a labeled 78 KDa band, p78, was always upregulated at day 1 pi, equally by live or heat-killed bacteria. Time-course infection experiments revealed that live bacteria sustained p78 longer, with a 2-fold difference with killed, at day 4. So, p78 was sustained by live intracellular bacteria. The p78 spot had pI=3.9 in 2D gels. A stained spot was identified by MS as HSPA5, an ER chaperone (normal pI=5.3). So, p78 was an ultra-acidic, cytosolic, charge variant of HSPA5, but with similar mobility in gels. p78 was upregulated at day 1 also by 2 gram-negative bacteria (live or killed). Thus, p78 was likely a conserved cell response to heat-resistant molecules of different bacteria. Since it did suggest participation of TLRs, we treated cells with pure TLR2 ligands like lipopeptides, LTA, etc., upregulating p78 again. Contrary to the normal HSPA5 precursor, p78 was ER-stress independent. So, p78 might arise from a minor precursor pool after addition of a PTM. p78 was undetectable in WB and IVR outperformed silver and dyes in sensitivity. We improved the IVR to monitor p78 only in 1D gels and identified a kinase labeling p78 by IVR (did not label HSPA5). Taxol treatment revealed that microtubules were involved with p78. LPS as TLR4 ligand did not generate p78. TLR2 negative HeLa cells had no upregulation. The 1.4 pH units shift, without intermediate spots, would imply a single-step polyanionic PTM, incompatible with multisite phosphorylation. Besides, a phosphate-binding dye did not detect p78. So far, the PTM escaped MS identification. We conclude that any candidate PTM should comply these characteristics: a) be poly-anionic and/or neutralize many basic HSPA5 residues, b) generate a reproducible pI reduction, maintaining equal mobility, c) compatibility with the spatiotemporal aspects of the upregulation plus association to microtubules, d) TLR2 ligation dependency, e) ER-stress and ligand-structure independency, f) if more than 1 enzyme is involved, they should be spatiotemporally coordinated. We discuss the literature about candidate PTMs, together with reports of other HSPA5 forms. p78 in THP1 is a reproducible biomarker useful to compare different TLR2 ligands and bacteria and deserves more studies about its roles in innate immune responses and its PTM.
Fil: Asensio, Cristian Jorge Alejandro. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tandil. Centro de Investigación Veterinaria de Tandil. Universidad Nacional del Centro de la Provincia de Buenos Aires. Centro de Investigación Veterinaria de Tandil. Provincia de Buenos Aires. Gobernación. Comision de Investigaciones Científicas. Centro de Investigación Veterinaria de Tandil; Argentina. International Centre for Genetic Engineering and Biotechnology; Italia
Fil: Myers, Michael P.. International Centre for Genetic Engineering and Biotechnology; Italia
Fil: Baralle, Francisco E.. International Centre for Genetic Engineering and Biotechnology; Italia
Fil: García, Rodolfo C.. International Centre for Genetic Engineering and Biotechnology; Italia
LXXI Reunión Científica Anual de la Sociedad Argentina de Inmunología
San Luis
Argentina
Sociedad Argentina de Inmunología
Universidad Nacional de San Luis
description Finding proteins altered in level/PTMs during bacterial infection in macrophages requires sensitive screening protocols in gels, outperforming dyes. We searched cytosolic proteins altered in a time-dependent, sustained manner, at days 1-4 post-infection (pi). Thus, we optimized cell-free, in vitro radiolabeling (IVR) assays of cytosolic proteomes of THP1 cells to covalently label some proteins with P-32. Proteomes were resolved by 1D/2D gels to detect bands/spots with altered IVR. 3-4 experiments were performed per condition. Interesting proteins were identified by MS. Bibliometric and informatic studies were initiated to interpret the findings. RESULTS: After infection with Mycobacterium avium, a labeled 78 KDa band, p78, was always upregulated at day 1 pi, equally by live or heat-killed bacteria. Time-course infection experiments revealed that live bacteria sustained p78 longer, with a 2-fold difference with killed, at day 4. So, p78 was sustained by live intracellular bacteria. The p78 spot had pI=3.9 in 2D gels. A stained spot was identified by MS as HSPA5, an ER chaperone (normal pI=5.3). So, p78 was an ultra-acidic, cytosolic, charge variant of HSPA5, but with similar mobility in gels. p78 was upregulated at day 1 also by 2 gram-negative bacteria (live or killed). Thus, p78 was likely a conserved cell response to heat-resistant molecules of different bacteria. Since it did suggest participation of TLRs, we treated cells with pure TLR2 ligands like lipopeptides, LTA, etc., upregulating p78 again. Contrary to the normal HSPA5 precursor, p78 was ER-stress independent. So, p78 might arise from a minor precursor pool after addition of a PTM. p78 was undetectable in WB and IVR outperformed silver and dyes in sensitivity. We improved the IVR to monitor p78 only in 1D gels and identified a kinase labeling p78 by IVR (did not label HSPA5). Taxol treatment revealed that microtubules were involved with p78. LPS as TLR4 ligand did not generate p78. TLR2 negative HeLa cells had no upregulation. The 1.4 pH units shift, without intermediate spots, would imply a single-step polyanionic PTM, incompatible with multisite phosphorylation. Besides, a phosphate-binding dye did not detect p78. So far, the PTM escaped MS identification. We conclude that any candidate PTM should comply these characteristics: a) be poly-anionic and/or neutralize many basic HSPA5 residues, b) generate a reproducible pI reduction, maintaining equal mobility, c) compatibility with the spatiotemporal aspects of the upregulation plus association to microtubules, d) TLR2 ligation dependency, e) ER-stress and ligand-structure independency, f) if more than 1 enzyme is involved, they should be spatiotemporally coordinated. We discuss the literature about candidate PTMs, together with reports of other HSPA5 forms. p78 in THP1 is a reproducible biomarker useful to compare different TLR2 ligands and bacteria and deserves more studies about its roles in innate immune responses and its PTM.
publishDate 2023
dc.date.none.fl_str_mv 2023
dc.type.none.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/conferenceObject
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Book
http://purl.org/coar/resource_type/c_5794
info:ar-repo/semantics/documentoDeConferencia
status_str publishedVersion
format conferenceObject
dc.identifier.none.fl_str_mv http://hdl.handle.net/11336/242162
Proteome radiolabeling assays reveal that infection of thp1 macrophages with different bacteria up-regulates a novel cytosolic variant of an er chaperone, showing a pireducing ptm of unknown structure. dependency on tlr2- ligation and microtubule; LXXI Reunión Científica Anual de la Sociedad Argentina de Inmunología; San Luis; Argentina; 2023; 131
978-987-733-386-2
CONICET Digital
CONICET
url http://hdl.handle.net/11336/242162
identifier_str_mv Proteome radiolabeling assays reveal that infection of thp1 macrophages with different bacteria up-regulates a novel cytosolic variant of an er chaperone, showing a pireducing ptm of unknown structure. dependency on tlr2- ligation and microtubule; LXXI Reunión Científica Anual de la Sociedad Argentina de Inmunología; San Luis; Argentina; 2023; 131
978-987-733-386-2
CONICET Digital
CONICET
dc.language.none.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv info:eu-repo/semantics/altIdentifier/url/https://inmunologia.org.ar/wp-content/uploads/2023/11/Libro-de-Resumenes-LXXI-Reunion-SAI-2023.pdf
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
eu_rights_str_mv openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
dc.format.none.fl_str_mv application/pdf
application/pdf
application/pdf
dc.coverage.none.fl_str_mv Nacional
dc.publisher.none.fl_str_mv Universidad Nacional de San Luis
publisher.none.fl_str_mv Universidad Nacional de San Luis
dc.source.none.fl_str_mv reponame:CONICET Digital (CONICET)
instname:Consejo Nacional de Investigaciones Científicas y Técnicas
reponame_str CONICET Digital (CONICET)
collection CONICET Digital (CONICET)
instname_str Consejo Nacional de Investigaciones Científicas y Técnicas
repository.name.fl_str_mv CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas
repository.mail.fl_str_mv dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar
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