Regulation of Drosophila hypoxia-inducible factor (HIF) activity in SL2 cells: Identification of a hypoxia-induced variant isoform of the HIFα homolog gene similar

Autores
Gorr, T.A.; Tomita, T.; Wappner, P.; Bunn, H.F.
Año de publicación
2004
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
Although hypoxia-inducible factor-α (HIFα) subunit-specific hydroxylation and proteolytic breakdown explain the binary switch between the presence (hypoxia) and absence (normoxia) of HIFs, little is known of the mechanisms that fine-tune HIF activity under constant, rather than changing, oxygen tensions. Here, we report that the Drosophila HIFα homolog, the basic helix-loop-helix/PAS protein Sima (Similar), in hypoxic cultures of SL2 cells is expressed in full-length (fl) and splice variant (sv) isoforms. The following evidence supports the role of flSima as functional HIFα and the role of SL2 HIF as a transcriptional activator or suppressor. The pO2 dependence of Sima abundance matched that of HIF activity. HIF-dependent changes in candidate target gene expression were detected through variously effective stimuli: hypoxia (strong) > iron chelation, e.g. desferrioxamine (moderate) ≪ transition metals, e.g. cobalt ≃ normoxia (ineffective). Sima overexpression augmented hypoxic induction or suppression of different targets. In addition to the full-length exon 1-12 transcript yielding the 1510-amino acid HIFα homolog, the sima gene also expressed, specifically under hypoxia, an exon 1-7/12 splice variant, which translated into a 426-amino acid Sima truncation termed svSima. svSima contains basic helix-loop-helix and PAS sequences identical to those of flSima, but, because of deletion of exons 8-11, lacks the oxygen-dependent degradation domain and nuclear localization signals. Overexpressed svSima failed to transactivate reporter genes. However, it attenuated HIF (Sima-Tango)-stimulated reporter expression in a dose-dependent manner. Thus, svSima has the potential to regulate Drosophila HIF function under steady and hypoxic pO2 by creating a cytosolic sink for the Sima partner protein Tango.
Fil:Wappner, P. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales; Argentina.
Fuente
J. Biol. Chem. 2004;279(34):36048-36058
Materia
Amino acids
Chelation
Genes
Hydroxylation
Iron
Iron chelation
Sima genes
Cell culture
amino acid
cobalt
complementary DNA
deferoxamine
erythropoietin
helix loop helix protein
hypoxia inducible factor 1alpha
iron
luciferase
messenger RNA
metal
oxygen
PAS protein
protein Tango
RNA
Sima protein
unclassified drug
animal cell
article
controlled study
Drosophila
gene overexpression
genetic transfection
hydroxylation
hypoxia
hypoxia response element
molecular cloning
nonhuman
Northern blotting
open reading frame
oxygen tension
priority journal
protein degradation
protein localization
reporter gene
reverse transcription polymerase chain reaction
RNA isolation
signal transduction
transcription regulation
untranslated region
Western blotting
Amino Acid Sequence
Animals
Aryl Hydrocarbon Receptor Nuclear Translocator
Carrier Proteins
Cell Hypoxia
Cell Line
DNA-Binding Proteins
Drosophila
Drosophila Proteins
Gene Expression Regulation
Humans
Hypoxia-Inducible Factor 1, alpha Subunit
Molecular Sequence Data
Sequence Homology
Signal Transduction
Transcription Factors
Animalia
Nivel de accesibilidad
acceso abierto
Condiciones de uso
http://creativecommons.org/licenses/by/2.5/ar
Repositorio
Biblioteca Digital (UBA-FCEN)
Institución
Universidad Nacional de Buenos Aires. Facultad de Ciencias Exactas y Naturales
OAI Identificador
paperaa:paper_00219258_v279_n34_p36048_Gorr

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oai_identifier_str paperaa:paper_00219258_v279_n34_p36048_Gorr
network_acronym_str BDUBAFCEN
repository_id_str 1896
network_name_str Biblioteca Digital (UBA-FCEN)
spelling Regulation of Drosophila hypoxia-inducible factor (HIF) activity in SL2 cells: Identification of a hypoxia-induced variant isoform of the HIFα homolog gene similarGorr, T.A.Tomita, T.Wappner, P.Bunn, H.F.Amino acidsChelationGenesHydroxylationIronIron chelationSima genesCell cultureamino acidcobaltcomplementary DNAdeferoxamineerythropoietinhelix loop helix proteinhypoxia inducible factor 1alphaironluciferasemessenger RNAmetaloxygenPAS proteinprotein TangoRNASima proteinunclassified druganimal cellarticlecontrolled studyDrosophilagene overexpressiongenetic transfectionhydroxylationhypoxiahypoxia response elementmolecular cloningnonhumanNorthern blottingopen reading frameoxygen tensionpriority journalprotein degradationprotein localizationreporter genereverse transcription polymerase chain reactionRNA isolationsignal transductiontranscription regulationuntranslated regionWestern blottingAmino Acid SequenceAnimalsAryl Hydrocarbon Receptor Nuclear TranslocatorCarrier ProteinsCell HypoxiaCell LineDNA-Binding ProteinsDrosophilaDrosophila ProteinsGene Expression RegulationHumansHypoxia-Inducible Factor 1, alpha SubunitMolecular Sequence DataSequence HomologySignal TransductionTranscription FactorsAnimaliaAlthough hypoxia-inducible factor-α (HIFα) subunit-specific hydroxylation and proteolytic breakdown explain the binary switch between the presence (hypoxia) and absence (normoxia) of HIFs, little is known of the mechanisms that fine-tune HIF activity under constant, rather than changing, oxygen tensions. Here, we report that the Drosophila HIFα homolog, the basic helix-loop-helix/PAS protein Sima (Similar), in hypoxic cultures of SL2 cells is expressed in full-length (fl) and splice variant (sv) isoforms. The following evidence supports the role of flSima as functional HIFα and the role of SL2 HIF as a transcriptional activator or suppressor. The pO2 dependence of Sima abundance matched that of HIF activity. HIF-dependent changes in candidate target gene expression were detected through variously effective stimuli: hypoxia (strong) > iron chelation, e.g. desferrioxamine (moderate) ≪ transition metals, e.g. cobalt ≃ normoxia (ineffective). Sima overexpression augmented hypoxic induction or suppression of different targets. In addition to the full-length exon 1-12 transcript yielding the 1510-amino acid HIFα homolog, the sima gene also expressed, specifically under hypoxia, an exon 1-7/12 splice variant, which translated into a 426-amino acid Sima truncation termed svSima. svSima contains basic helix-loop-helix and PAS sequences identical to those of flSima, but, because of deletion of exons 8-11, lacks the oxygen-dependent degradation domain and nuclear localization signals. Overexpressed svSima failed to transactivate reporter genes. However, it attenuated HIF (Sima-Tango)-stimulated reporter expression in a dose-dependent manner. Thus, svSima has the potential to regulate Drosophila HIF function under steady and hypoxic pO2 by creating a cytosolic sink for the Sima partner protein Tango.Fil:Wappner, P. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales; Argentina.2004info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfhttp://hdl.handle.net/20.500.12110/paper_00219258_v279_n34_p36048_GorrJ. Biol. Chem. 2004;279(34):36048-36058reponame:Biblioteca Digital (UBA-FCEN)instname:Universidad Nacional de Buenos Aires. Facultad de Ciencias Exactas y Naturalesinstacron:UBA-FCENenginfo:eu-repo/semantics/openAccesshttp://creativecommons.org/licenses/by/2.5/ar2025-09-29T13:42:57Zpaperaa:paper_00219258_v279_n34_p36048_GorrInstitucionalhttps://digital.bl.fcen.uba.ar/Universidad públicaNo correspondehttps://digital.bl.fcen.uba.ar/cgi-bin/oaiserver.cgiana@bl.fcen.uba.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:18962025-09-29 13:42:58.756Biblioteca Digital (UBA-FCEN) - Universidad Nacional de Buenos Aires. Facultad de Ciencias Exactas y Naturalesfalse
dc.title.none.fl_str_mv Regulation of Drosophila hypoxia-inducible factor (HIF) activity in SL2 cells: Identification of a hypoxia-induced variant isoform of the HIFα homolog gene similar
title Regulation of Drosophila hypoxia-inducible factor (HIF) activity in SL2 cells: Identification of a hypoxia-induced variant isoform of the HIFα homolog gene similar
spellingShingle Regulation of Drosophila hypoxia-inducible factor (HIF) activity in SL2 cells: Identification of a hypoxia-induced variant isoform of the HIFα homolog gene similar
Gorr, T.A.
Amino acids
Chelation
Genes
Hydroxylation
Iron
Iron chelation
Sima genes
Cell culture
amino acid
cobalt
complementary DNA
deferoxamine
erythropoietin
helix loop helix protein
hypoxia inducible factor 1alpha
iron
luciferase
messenger RNA
metal
oxygen
PAS protein
protein Tango
RNA
Sima protein
unclassified drug
animal cell
article
controlled study
Drosophila
gene overexpression
genetic transfection
hydroxylation
hypoxia
hypoxia response element
molecular cloning
nonhuman
Northern blotting
open reading frame
oxygen tension
priority journal
protein degradation
protein localization
reporter gene
reverse transcription polymerase chain reaction
RNA isolation
signal transduction
transcription regulation
untranslated region
Western blotting
Amino Acid Sequence
Animals
Aryl Hydrocarbon Receptor Nuclear Translocator
Carrier Proteins
Cell Hypoxia
Cell Line
DNA-Binding Proteins
Drosophila
Drosophila Proteins
Gene Expression Regulation
Humans
Hypoxia-Inducible Factor 1, alpha Subunit
Molecular Sequence Data
Sequence Homology
Signal Transduction
Transcription Factors
Animalia
title_short Regulation of Drosophila hypoxia-inducible factor (HIF) activity in SL2 cells: Identification of a hypoxia-induced variant isoform of the HIFα homolog gene similar
title_full Regulation of Drosophila hypoxia-inducible factor (HIF) activity in SL2 cells: Identification of a hypoxia-induced variant isoform of the HIFα homolog gene similar
title_fullStr Regulation of Drosophila hypoxia-inducible factor (HIF) activity in SL2 cells: Identification of a hypoxia-induced variant isoform of the HIFα homolog gene similar
title_full_unstemmed Regulation of Drosophila hypoxia-inducible factor (HIF) activity in SL2 cells: Identification of a hypoxia-induced variant isoform of the HIFα homolog gene similar
title_sort Regulation of Drosophila hypoxia-inducible factor (HIF) activity in SL2 cells: Identification of a hypoxia-induced variant isoform of the HIFα homolog gene similar
dc.creator.none.fl_str_mv Gorr, T.A.
Tomita, T.
Wappner, P.
Bunn, H.F.
author Gorr, T.A.
author_facet Gorr, T.A.
Tomita, T.
Wappner, P.
Bunn, H.F.
author_role author
author2 Tomita, T.
Wappner, P.
Bunn, H.F.
author2_role author
author
author
dc.subject.none.fl_str_mv Amino acids
Chelation
Genes
Hydroxylation
Iron
Iron chelation
Sima genes
Cell culture
amino acid
cobalt
complementary DNA
deferoxamine
erythropoietin
helix loop helix protein
hypoxia inducible factor 1alpha
iron
luciferase
messenger RNA
metal
oxygen
PAS protein
protein Tango
RNA
Sima protein
unclassified drug
animal cell
article
controlled study
Drosophila
gene overexpression
genetic transfection
hydroxylation
hypoxia
hypoxia response element
molecular cloning
nonhuman
Northern blotting
open reading frame
oxygen tension
priority journal
protein degradation
protein localization
reporter gene
reverse transcription polymerase chain reaction
RNA isolation
signal transduction
transcription regulation
untranslated region
Western blotting
Amino Acid Sequence
Animals
Aryl Hydrocarbon Receptor Nuclear Translocator
Carrier Proteins
Cell Hypoxia
Cell Line
DNA-Binding Proteins
Drosophila
Drosophila Proteins
Gene Expression Regulation
Humans
Hypoxia-Inducible Factor 1, alpha Subunit
Molecular Sequence Data
Sequence Homology
Signal Transduction
Transcription Factors
Animalia
topic Amino acids
Chelation
Genes
Hydroxylation
Iron
Iron chelation
Sima genes
Cell culture
amino acid
cobalt
complementary DNA
deferoxamine
erythropoietin
helix loop helix protein
hypoxia inducible factor 1alpha
iron
luciferase
messenger RNA
metal
oxygen
PAS protein
protein Tango
RNA
Sima protein
unclassified drug
animal cell
article
controlled study
Drosophila
gene overexpression
genetic transfection
hydroxylation
hypoxia
hypoxia response element
molecular cloning
nonhuman
Northern blotting
open reading frame
oxygen tension
priority journal
protein degradation
protein localization
reporter gene
reverse transcription polymerase chain reaction
RNA isolation
signal transduction
transcription regulation
untranslated region
Western blotting
Amino Acid Sequence
Animals
Aryl Hydrocarbon Receptor Nuclear Translocator
Carrier Proteins
Cell Hypoxia
Cell Line
DNA-Binding Proteins
Drosophila
Drosophila Proteins
Gene Expression Regulation
Humans
Hypoxia-Inducible Factor 1, alpha Subunit
Molecular Sequence Data
Sequence Homology
Signal Transduction
Transcription Factors
Animalia
dc.description.none.fl_txt_mv Although hypoxia-inducible factor-α (HIFα) subunit-specific hydroxylation and proteolytic breakdown explain the binary switch between the presence (hypoxia) and absence (normoxia) of HIFs, little is known of the mechanisms that fine-tune HIF activity under constant, rather than changing, oxygen tensions. Here, we report that the Drosophila HIFα homolog, the basic helix-loop-helix/PAS protein Sima (Similar), in hypoxic cultures of SL2 cells is expressed in full-length (fl) and splice variant (sv) isoforms. The following evidence supports the role of flSima as functional HIFα and the role of SL2 HIF as a transcriptional activator or suppressor. The pO2 dependence of Sima abundance matched that of HIF activity. HIF-dependent changes in candidate target gene expression were detected through variously effective stimuli: hypoxia (strong) > iron chelation, e.g. desferrioxamine (moderate) ≪ transition metals, e.g. cobalt ≃ normoxia (ineffective). Sima overexpression augmented hypoxic induction or suppression of different targets. In addition to the full-length exon 1-12 transcript yielding the 1510-amino acid HIFα homolog, the sima gene also expressed, specifically under hypoxia, an exon 1-7/12 splice variant, which translated into a 426-amino acid Sima truncation termed svSima. svSima contains basic helix-loop-helix and PAS sequences identical to those of flSima, but, because of deletion of exons 8-11, lacks the oxygen-dependent degradation domain and nuclear localization signals. Overexpressed svSima failed to transactivate reporter genes. However, it attenuated HIF (Sima-Tango)-stimulated reporter expression in a dose-dependent manner. Thus, svSima has the potential to regulate Drosophila HIF function under steady and hypoxic pO2 by creating a cytosolic sink for the Sima partner protein Tango.
Fil:Wappner, P. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales; Argentina.
description Although hypoxia-inducible factor-α (HIFα) subunit-specific hydroxylation and proteolytic breakdown explain the binary switch between the presence (hypoxia) and absence (normoxia) of HIFs, little is known of the mechanisms that fine-tune HIF activity under constant, rather than changing, oxygen tensions. Here, we report that the Drosophila HIFα homolog, the basic helix-loop-helix/PAS protein Sima (Similar), in hypoxic cultures of SL2 cells is expressed in full-length (fl) and splice variant (sv) isoforms. The following evidence supports the role of flSima as functional HIFα and the role of SL2 HIF as a transcriptional activator or suppressor. The pO2 dependence of Sima abundance matched that of HIF activity. HIF-dependent changes in candidate target gene expression were detected through variously effective stimuli: hypoxia (strong) > iron chelation, e.g. desferrioxamine (moderate) ≪ transition metals, e.g. cobalt ≃ normoxia (ineffective). Sima overexpression augmented hypoxic induction or suppression of different targets. In addition to the full-length exon 1-12 transcript yielding the 1510-amino acid HIFα homolog, the sima gene also expressed, specifically under hypoxia, an exon 1-7/12 splice variant, which translated into a 426-amino acid Sima truncation termed svSima. svSima contains basic helix-loop-helix and PAS sequences identical to those of flSima, but, because of deletion of exons 8-11, lacks the oxygen-dependent degradation domain and nuclear localization signals. Overexpressed svSima failed to transactivate reporter genes. However, it attenuated HIF (Sima-Tango)-stimulated reporter expression in a dose-dependent manner. Thus, svSima has the potential to regulate Drosophila HIF function under steady and hypoxic pO2 by creating a cytosolic sink for the Sima partner protein Tango.
publishDate 2004
dc.date.none.fl_str_mv 2004
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/20.500.12110/paper_00219258_v279_n34_p36048_Gorr
url http://hdl.handle.net/20.500.12110/paper_00219258_v279_n34_p36048_Gorr
dc.language.none.fl_str_mv eng
language eng
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
http://creativecommons.org/licenses/by/2.5/ar
eu_rights_str_mv openAccess
rights_invalid_str_mv http://creativecommons.org/licenses/by/2.5/ar
dc.format.none.fl_str_mv application/pdf
dc.source.none.fl_str_mv J. Biol. Chem. 2004;279(34):36048-36058
reponame:Biblioteca Digital (UBA-FCEN)
instname:Universidad Nacional de Buenos Aires. Facultad de Ciencias Exactas y Naturales
instacron:UBA-FCEN
reponame_str Biblioteca Digital (UBA-FCEN)
collection Biblioteca Digital (UBA-FCEN)
instname_str Universidad Nacional de Buenos Aires. Facultad de Ciencias Exactas y Naturales
instacron_str UBA-FCEN
institution UBA-FCEN
repository.name.fl_str_mv Biblioteca Digital (UBA-FCEN) - Universidad Nacional de Buenos Aires. Facultad de Ciencias Exactas y Naturales
repository.mail.fl_str_mv ana@bl.fcen.uba.ar
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