Regulation of Drosophila hypoxia-inducible factor (HIF) activity in SL2 cells: Identification of a hypoxia-induced variant isoform of the HIFα homolog gene similar
- Autores
- Gorr, T.A.; Tomita, T.; Wappner, P.; Bunn, H.F.
- Año de publicación
- 2004
- Idioma
- inglés
- Tipo de recurso
- artículo
- Estado
- versión publicada
- Descripción
- Although hypoxia-inducible factor-α (HIFα) subunit-specific hydroxylation and proteolytic breakdown explain the binary switch between the presence (hypoxia) and absence (normoxia) of HIFs, little is known of the mechanisms that fine-tune HIF activity under constant, rather than changing, oxygen tensions. Here, we report that the Drosophila HIFα homolog, the basic helix-loop-helix/PAS protein Sima (Similar), in hypoxic cultures of SL2 cells is expressed in full-length (fl) and splice variant (sv) isoforms. The following evidence supports the role of flSima as functional HIFα and the role of SL2 HIF as a transcriptional activator or suppressor. The pO2 dependence of Sima abundance matched that of HIF activity. HIF-dependent changes in candidate target gene expression were detected through variously effective stimuli: hypoxia (strong) > iron chelation, e.g. desferrioxamine (moderate) ≪ transition metals, e.g. cobalt ≃ normoxia (ineffective). Sima overexpression augmented hypoxic induction or suppression of different targets. In addition to the full-length exon 1-12 transcript yielding the 1510-amino acid HIFα homolog, the sima gene also expressed, specifically under hypoxia, an exon 1-7/12 splice variant, which translated into a 426-amino acid Sima truncation termed svSima. svSima contains basic helix-loop-helix and PAS sequences identical to those of flSima, but, because of deletion of exons 8-11, lacks the oxygen-dependent degradation domain and nuclear localization signals. Overexpressed svSima failed to transactivate reporter genes. However, it attenuated HIF (Sima-Tango)-stimulated reporter expression in a dose-dependent manner. Thus, svSima has the potential to regulate Drosophila HIF function under steady and hypoxic pO2 by creating a cytosolic sink for the Sima partner protein Tango.
Fil:Wappner, P. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales; Argentina. - Fuente
- J. Biol. Chem. 2004;279(34):36048-36058
- Materia
-
Amino acids
Chelation
Genes
Hydroxylation
Iron
Iron chelation
Sima genes
Cell culture
amino acid
cobalt
complementary DNA
deferoxamine
erythropoietin
helix loop helix protein
hypoxia inducible factor 1alpha
iron
luciferase
messenger RNA
metal
oxygen
PAS protein
protein Tango
RNA
Sima protein
unclassified drug
animal cell
article
controlled study
Drosophila
gene overexpression
genetic transfection
hydroxylation
hypoxia
hypoxia response element
molecular cloning
nonhuman
Northern blotting
open reading frame
oxygen tension
priority journal
protein degradation
protein localization
reporter gene
reverse transcription polymerase chain reaction
RNA isolation
signal transduction
transcription regulation
untranslated region
Western blotting
Amino Acid Sequence
Animals
Aryl Hydrocarbon Receptor Nuclear Translocator
Carrier Proteins
Cell Hypoxia
Cell Line
DNA-Binding Proteins
Drosophila
Drosophila Proteins
Gene Expression Regulation
Humans
Hypoxia-Inducible Factor 1, alpha Subunit
Molecular Sequence Data
Sequence Homology
Signal Transduction
Transcription Factors
Animalia - Nivel de accesibilidad
- acceso abierto
- Condiciones de uso
- http://creativecommons.org/licenses/by/2.5/ar
- Repositorio
- Institución
- Universidad Nacional de Buenos Aires. Facultad de Ciencias Exactas y Naturales
- OAI Identificador
- paperaa:paper_00219258_v279_n34_p36048_Gorr
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network_name_str |
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Regulation of Drosophila hypoxia-inducible factor (HIF) activity in SL2 cells: Identification of a hypoxia-induced variant isoform of the HIFα homolog gene similarGorr, T.A.Tomita, T.Wappner, P.Bunn, H.F.Amino acidsChelationGenesHydroxylationIronIron chelationSima genesCell cultureamino acidcobaltcomplementary DNAdeferoxamineerythropoietinhelix loop helix proteinhypoxia inducible factor 1alphaironluciferasemessenger RNAmetaloxygenPAS proteinprotein TangoRNASima proteinunclassified druganimal cellarticlecontrolled studyDrosophilagene overexpressiongenetic transfectionhydroxylationhypoxiahypoxia response elementmolecular cloningnonhumanNorthern blottingopen reading frameoxygen tensionpriority journalprotein degradationprotein localizationreporter genereverse transcription polymerase chain reactionRNA isolationsignal transductiontranscription regulationuntranslated regionWestern blottingAmino Acid SequenceAnimalsAryl Hydrocarbon Receptor Nuclear TranslocatorCarrier ProteinsCell HypoxiaCell LineDNA-Binding ProteinsDrosophilaDrosophila ProteinsGene Expression RegulationHumansHypoxia-Inducible Factor 1, alpha SubunitMolecular Sequence DataSequence HomologySignal TransductionTranscription FactorsAnimaliaAlthough hypoxia-inducible factor-α (HIFα) subunit-specific hydroxylation and proteolytic breakdown explain the binary switch between the presence (hypoxia) and absence (normoxia) of HIFs, little is known of the mechanisms that fine-tune HIF activity under constant, rather than changing, oxygen tensions. Here, we report that the Drosophila HIFα homolog, the basic helix-loop-helix/PAS protein Sima (Similar), in hypoxic cultures of SL2 cells is expressed in full-length (fl) and splice variant (sv) isoforms. The following evidence supports the role of flSima as functional HIFα and the role of SL2 HIF as a transcriptional activator or suppressor. The pO2 dependence of Sima abundance matched that of HIF activity. HIF-dependent changes in candidate target gene expression were detected through variously effective stimuli: hypoxia (strong) > iron chelation, e.g. desferrioxamine (moderate) ≪ transition metals, e.g. cobalt ≃ normoxia (ineffective). Sima overexpression augmented hypoxic induction or suppression of different targets. In addition to the full-length exon 1-12 transcript yielding the 1510-amino acid HIFα homolog, the sima gene also expressed, specifically under hypoxia, an exon 1-7/12 splice variant, which translated into a 426-amino acid Sima truncation termed svSima. svSima contains basic helix-loop-helix and PAS sequences identical to those of flSima, but, because of deletion of exons 8-11, lacks the oxygen-dependent degradation domain and nuclear localization signals. Overexpressed svSima failed to transactivate reporter genes. However, it attenuated HIF (Sima-Tango)-stimulated reporter expression in a dose-dependent manner. Thus, svSima has the potential to regulate Drosophila HIF function under steady and hypoxic pO2 by creating a cytosolic sink for the Sima partner protein Tango.Fil:Wappner, P. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales; Argentina.2004info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfhttp://hdl.handle.net/20.500.12110/paper_00219258_v279_n34_p36048_GorrJ. Biol. Chem. 2004;279(34):36048-36058reponame:Biblioteca Digital (UBA-FCEN)instname:Universidad Nacional de Buenos Aires. Facultad de Ciencias Exactas y Naturalesinstacron:UBA-FCENenginfo:eu-repo/semantics/openAccesshttp://creativecommons.org/licenses/by/2.5/ar2025-09-29T13:42:57Zpaperaa:paper_00219258_v279_n34_p36048_GorrInstitucionalhttps://digital.bl.fcen.uba.ar/Universidad públicaNo correspondehttps://digital.bl.fcen.uba.ar/cgi-bin/oaiserver.cgiana@bl.fcen.uba.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:18962025-09-29 13:42:58.756Biblioteca Digital (UBA-FCEN) - Universidad Nacional de Buenos Aires. Facultad de Ciencias Exactas y Naturalesfalse |
dc.title.none.fl_str_mv |
Regulation of Drosophila hypoxia-inducible factor (HIF) activity in SL2 cells: Identification of a hypoxia-induced variant isoform of the HIFα homolog gene similar |
title |
Regulation of Drosophila hypoxia-inducible factor (HIF) activity in SL2 cells: Identification of a hypoxia-induced variant isoform of the HIFα homolog gene similar |
spellingShingle |
Regulation of Drosophila hypoxia-inducible factor (HIF) activity in SL2 cells: Identification of a hypoxia-induced variant isoform of the HIFα homolog gene similar Gorr, T.A. Amino acids Chelation Genes Hydroxylation Iron Iron chelation Sima genes Cell culture amino acid cobalt complementary DNA deferoxamine erythropoietin helix loop helix protein hypoxia inducible factor 1alpha iron luciferase messenger RNA metal oxygen PAS protein protein Tango RNA Sima protein unclassified drug animal cell article controlled study Drosophila gene overexpression genetic transfection hydroxylation hypoxia hypoxia response element molecular cloning nonhuman Northern blotting open reading frame oxygen tension priority journal protein degradation protein localization reporter gene reverse transcription polymerase chain reaction RNA isolation signal transduction transcription regulation untranslated region Western blotting Amino Acid Sequence Animals Aryl Hydrocarbon Receptor Nuclear Translocator Carrier Proteins Cell Hypoxia Cell Line DNA-Binding Proteins Drosophila Drosophila Proteins Gene Expression Regulation Humans Hypoxia-Inducible Factor 1, alpha Subunit Molecular Sequence Data Sequence Homology Signal Transduction Transcription Factors Animalia |
title_short |
Regulation of Drosophila hypoxia-inducible factor (HIF) activity in SL2 cells: Identification of a hypoxia-induced variant isoform of the HIFα homolog gene similar |
title_full |
Regulation of Drosophila hypoxia-inducible factor (HIF) activity in SL2 cells: Identification of a hypoxia-induced variant isoform of the HIFα homolog gene similar |
title_fullStr |
Regulation of Drosophila hypoxia-inducible factor (HIF) activity in SL2 cells: Identification of a hypoxia-induced variant isoform of the HIFα homolog gene similar |
title_full_unstemmed |
Regulation of Drosophila hypoxia-inducible factor (HIF) activity in SL2 cells: Identification of a hypoxia-induced variant isoform of the HIFα homolog gene similar |
title_sort |
Regulation of Drosophila hypoxia-inducible factor (HIF) activity in SL2 cells: Identification of a hypoxia-induced variant isoform of the HIFα homolog gene similar |
dc.creator.none.fl_str_mv |
Gorr, T.A. Tomita, T. Wappner, P. Bunn, H.F. |
author |
Gorr, T.A. |
author_facet |
Gorr, T.A. Tomita, T. Wappner, P. Bunn, H.F. |
author_role |
author |
author2 |
Tomita, T. Wappner, P. Bunn, H.F. |
author2_role |
author author author |
dc.subject.none.fl_str_mv |
Amino acids Chelation Genes Hydroxylation Iron Iron chelation Sima genes Cell culture amino acid cobalt complementary DNA deferoxamine erythropoietin helix loop helix protein hypoxia inducible factor 1alpha iron luciferase messenger RNA metal oxygen PAS protein protein Tango RNA Sima protein unclassified drug animal cell article controlled study Drosophila gene overexpression genetic transfection hydroxylation hypoxia hypoxia response element molecular cloning nonhuman Northern blotting open reading frame oxygen tension priority journal protein degradation protein localization reporter gene reverse transcription polymerase chain reaction RNA isolation signal transduction transcription regulation untranslated region Western blotting Amino Acid Sequence Animals Aryl Hydrocarbon Receptor Nuclear Translocator Carrier Proteins Cell Hypoxia Cell Line DNA-Binding Proteins Drosophila Drosophila Proteins Gene Expression Regulation Humans Hypoxia-Inducible Factor 1, alpha Subunit Molecular Sequence Data Sequence Homology Signal Transduction Transcription Factors Animalia |
topic |
Amino acids Chelation Genes Hydroxylation Iron Iron chelation Sima genes Cell culture amino acid cobalt complementary DNA deferoxamine erythropoietin helix loop helix protein hypoxia inducible factor 1alpha iron luciferase messenger RNA metal oxygen PAS protein protein Tango RNA Sima protein unclassified drug animal cell article controlled study Drosophila gene overexpression genetic transfection hydroxylation hypoxia hypoxia response element molecular cloning nonhuman Northern blotting open reading frame oxygen tension priority journal protein degradation protein localization reporter gene reverse transcription polymerase chain reaction RNA isolation signal transduction transcription regulation untranslated region Western blotting Amino Acid Sequence Animals Aryl Hydrocarbon Receptor Nuclear Translocator Carrier Proteins Cell Hypoxia Cell Line DNA-Binding Proteins Drosophila Drosophila Proteins Gene Expression Regulation Humans Hypoxia-Inducible Factor 1, alpha Subunit Molecular Sequence Data Sequence Homology Signal Transduction Transcription Factors Animalia |
dc.description.none.fl_txt_mv |
Although hypoxia-inducible factor-α (HIFα) subunit-specific hydroxylation and proteolytic breakdown explain the binary switch between the presence (hypoxia) and absence (normoxia) of HIFs, little is known of the mechanisms that fine-tune HIF activity under constant, rather than changing, oxygen tensions. Here, we report that the Drosophila HIFα homolog, the basic helix-loop-helix/PAS protein Sima (Similar), in hypoxic cultures of SL2 cells is expressed in full-length (fl) and splice variant (sv) isoforms. The following evidence supports the role of flSima as functional HIFα and the role of SL2 HIF as a transcriptional activator or suppressor. The pO2 dependence of Sima abundance matched that of HIF activity. HIF-dependent changes in candidate target gene expression were detected through variously effective stimuli: hypoxia (strong) > iron chelation, e.g. desferrioxamine (moderate) ≪ transition metals, e.g. cobalt ≃ normoxia (ineffective). Sima overexpression augmented hypoxic induction or suppression of different targets. In addition to the full-length exon 1-12 transcript yielding the 1510-amino acid HIFα homolog, the sima gene also expressed, specifically under hypoxia, an exon 1-7/12 splice variant, which translated into a 426-amino acid Sima truncation termed svSima. svSima contains basic helix-loop-helix and PAS sequences identical to those of flSima, but, because of deletion of exons 8-11, lacks the oxygen-dependent degradation domain and nuclear localization signals. Overexpressed svSima failed to transactivate reporter genes. However, it attenuated HIF (Sima-Tango)-stimulated reporter expression in a dose-dependent manner. Thus, svSima has the potential to regulate Drosophila HIF function under steady and hypoxic pO2 by creating a cytosolic sink for the Sima partner protein Tango. Fil:Wappner, P. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales; Argentina. |
description |
Although hypoxia-inducible factor-α (HIFα) subunit-specific hydroxylation and proteolytic breakdown explain the binary switch between the presence (hypoxia) and absence (normoxia) of HIFs, little is known of the mechanisms that fine-tune HIF activity under constant, rather than changing, oxygen tensions. Here, we report that the Drosophila HIFα homolog, the basic helix-loop-helix/PAS protein Sima (Similar), in hypoxic cultures of SL2 cells is expressed in full-length (fl) and splice variant (sv) isoforms. The following evidence supports the role of flSima as functional HIFα and the role of SL2 HIF as a transcriptional activator or suppressor. The pO2 dependence of Sima abundance matched that of HIF activity. HIF-dependent changes in candidate target gene expression were detected through variously effective stimuli: hypoxia (strong) > iron chelation, e.g. desferrioxamine (moderate) ≪ transition metals, e.g. cobalt ≃ normoxia (ineffective). Sima overexpression augmented hypoxic induction or suppression of different targets. In addition to the full-length exon 1-12 transcript yielding the 1510-amino acid HIFα homolog, the sima gene also expressed, specifically under hypoxia, an exon 1-7/12 splice variant, which translated into a 426-amino acid Sima truncation termed svSima. svSima contains basic helix-loop-helix and PAS sequences identical to those of flSima, but, because of deletion of exons 8-11, lacks the oxygen-dependent degradation domain and nuclear localization signals. Overexpressed svSima failed to transactivate reporter genes. However, it attenuated HIF (Sima-Tango)-stimulated reporter expression in a dose-dependent manner. Thus, svSima has the potential to regulate Drosophila HIF function under steady and hypoxic pO2 by creating a cytosolic sink for the Sima partner protein Tango. |
publishDate |
2004 |
dc.date.none.fl_str_mv |
2004 |
dc.type.none.fl_str_mv |
info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion http://purl.org/coar/resource_type/c_6501 info:ar-repo/semantics/articulo |
format |
article |
status_str |
publishedVersion |
dc.identifier.none.fl_str_mv |
http://hdl.handle.net/20.500.12110/paper_00219258_v279_n34_p36048_Gorr |
url |
http://hdl.handle.net/20.500.12110/paper_00219258_v279_n34_p36048_Gorr |
dc.language.none.fl_str_mv |
eng |
language |
eng |
dc.rights.none.fl_str_mv |
info:eu-repo/semantics/openAccess http://creativecommons.org/licenses/by/2.5/ar |
eu_rights_str_mv |
openAccess |
rights_invalid_str_mv |
http://creativecommons.org/licenses/by/2.5/ar |
dc.format.none.fl_str_mv |
application/pdf |
dc.source.none.fl_str_mv |
J. Biol. Chem. 2004;279(34):36048-36058 reponame:Biblioteca Digital (UBA-FCEN) instname:Universidad Nacional de Buenos Aires. Facultad de Ciencias Exactas y Naturales instacron:UBA-FCEN |
reponame_str |
Biblioteca Digital (UBA-FCEN) |
collection |
Biblioteca Digital (UBA-FCEN) |
instname_str |
Universidad Nacional de Buenos Aires. Facultad de Ciencias Exactas y Naturales |
instacron_str |
UBA-FCEN |
institution |
UBA-FCEN |
repository.name.fl_str_mv |
Biblioteca Digital (UBA-FCEN) - Universidad Nacional de Buenos Aires. Facultad de Ciencias Exactas y Naturales |
repository.mail.fl_str_mv |
ana@bl.fcen.uba.ar |
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1844618735874211840 |
score |
13.070432 |