Investigation of the structure and proteolytic activity of papain in aqueous miscible organic media

Autores
Llerena Suster, Carlos Rafael; José, Carla; Collins, Sebastián E.; Briand, Laura Estefanía; Morcelle del Valle, Susana Raquel
Año de publicación
2012
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
The stability of papain was studied in aqueous–organic mixtures by means of residual proteolytic activity along with various spectroscopic analyses (fluorescence and ATR-FTIR combined with isotopic exchange with D2O). The investigated systems contained 1 or 10% (v/v) of an aqueous buffered solution (pH 8.0) in acetonitrile (ACN), methanol (MeOH) or dimethyl formamide (DMF). The results evidenced that papain retained almost all its catalytic activity after 24 h of incubation in the presence of ACN, and a more compact conformation of the enzyme was detected. Papain suffered an important loss of enzymatic activity (ca. 80%) after 24 h incubation in MeOH although, no global conformational change and minor secondary structure rearrangements were detected. This observation suggests that somehow the active site region was altered. On the other hand, papain suffered a complete inactivation when exposed to those media containing DMF. Fluorescence analyses revealed that an irreversible conformational change took place after 24 h incubation, and a moderate increase in b-sheet and b-turn structures was the most relevant finding when secondary structure was analyzed. The evidences demonstrated that the organic solvents induce a more rigid and compact structure of papain regardless of the organic:buffer ratio investigated. In turn, these modifications affect the active catalytic site in the particular case of MeOH and DMF. These findings were in agreement with the thermo-stability of the enzyme performed after heating at 353 K in all the studied media, that is the presence of ACN did not substantially affect the secondary structure of papain. Nevertheless, the a-helix domain demonstrated to be less thermally stable than the b-sheet domain, turning into aggregated structures after heating, especially in the presence of MeOH and DMF.
Centro de Investigación de Proteínas Vegetales
Centro de Investigación y Desarrollo en Ciencias Aplicadas
Materia
Biología
Papain
Aqueous–organic media
Catalytic stability
Structural stability
Thermal stability
Fluorescence spectroscopy
ATR-FTIR spectroscopy
Nivel de accesibilidad
acceso abierto
Condiciones de uso
http://creativecommons.org/licenses/by-nc-sa/4.0/
Repositorio
SEDICI (UNLP)
Institución
Universidad Nacional de La Plata
OAI Identificador
oai:sedici.unlp.edu.ar:10915/112868

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repository_id_str 1329
network_name_str SEDICI (UNLP)
spelling Investigation of the structure and proteolytic activity of papain in aqueous miscible organic mediaLlerena Suster, Carlos RafaelJosé, CarlaCollins, Sebastián E.Briand, Laura EstefaníaMorcelle del Valle, Susana RaquelBiologíaPapainAqueous–organic mediaCatalytic stabilityStructural stabilityThermal stabilityFluorescence spectroscopyATR-FTIR spectroscopyThe stability of papain was studied in aqueous–organic mixtures by means of residual proteolytic activity along with various spectroscopic analyses (fluorescence and ATR-FTIR combined with isotopic exchange with D2O). The investigated systems contained 1 or 10% (v/v) of an aqueous buffered solution (pH 8.0) in acetonitrile (ACN), methanol (MeOH) or dimethyl formamide (DMF). The results evidenced that papain retained almost all its catalytic activity after 24 h of incubation in the presence of ACN, and a more compact conformation of the enzyme was detected. Papain suffered an important loss of enzymatic activity (ca. 80%) after 24 h incubation in MeOH although, no global conformational change and minor secondary structure rearrangements were detected. This observation suggests that somehow the active site region was altered. On the other hand, papain suffered a complete inactivation when exposed to those media containing DMF. Fluorescence analyses revealed that an irreversible conformational change took place after 24 h incubation, and a moderate increase in b-sheet and b-turn structures was the most relevant finding when secondary structure was analyzed. The evidences demonstrated that the organic solvents induce a more rigid and compact structure of papain regardless of the organic:buffer ratio investigated. In turn, these modifications affect the active catalytic site in the particular case of MeOH and DMF. These findings were in agreement with the thermo-stability of the enzyme performed after heating at 353 K in all the studied media, that is the presence of ACN did not substantially affect the secondary structure of papain. Nevertheless, the a-helix domain demonstrated to be less thermally stable than the b-sheet domain, turning into aggregated structures after heating, especially in the presence of MeOH and DMF.Centro de Investigación de Proteínas VegetalesCentro de Investigación y Desarrollo en Ciencias Aplicadas2012info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionArticulohttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdf47-56http://sedici.unlp.edu.ar/handle/10915/112868enginfo:eu-repo/semantics/altIdentifier/issn/1359-5113info:eu-repo/semantics/altIdentifier/doi/10.1016/j.procbio.2011.10.003info:eu-repo/semantics/openAccesshttp://creativecommons.org/licenses/by-nc-sa/4.0/Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)reponame:SEDICI (UNLP)instname:Universidad Nacional de La Platainstacron:UNLP2025-12-23T11:28:04Zoai:sedici.unlp.edu.ar:10915/112868Institucionalhttp://sedici.unlp.edu.ar/Universidad públicaNo correspondehttp://sedici.unlp.edu.ar/oai/snrdalira@sedici.unlp.edu.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:13292025-12-23 11:28:04.815SEDICI (UNLP) - Universidad Nacional de La Platafalse
dc.title.none.fl_str_mv Investigation of the structure and proteolytic activity of papain in aqueous miscible organic media
title Investigation of the structure and proteolytic activity of papain in aqueous miscible organic media
spellingShingle Investigation of the structure and proteolytic activity of papain in aqueous miscible organic media
Llerena Suster, Carlos Rafael
Biología
Papain
Aqueous–organic media
Catalytic stability
Structural stability
Thermal stability
Fluorescence spectroscopy
ATR-FTIR spectroscopy
title_short Investigation of the structure and proteolytic activity of papain in aqueous miscible organic media
title_full Investigation of the structure and proteolytic activity of papain in aqueous miscible organic media
title_fullStr Investigation of the structure and proteolytic activity of papain in aqueous miscible organic media
title_full_unstemmed Investigation of the structure and proteolytic activity of papain in aqueous miscible organic media
title_sort Investigation of the structure and proteolytic activity of papain in aqueous miscible organic media
dc.creator.none.fl_str_mv Llerena Suster, Carlos Rafael
José, Carla
Collins, Sebastián E.
Briand, Laura Estefanía
Morcelle del Valle, Susana Raquel
author Llerena Suster, Carlos Rafael
author_facet Llerena Suster, Carlos Rafael
José, Carla
Collins, Sebastián E.
Briand, Laura Estefanía
Morcelle del Valle, Susana Raquel
author_role author
author2 José, Carla
Collins, Sebastián E.
Briand, Laura Estefanía
Morcelle del Valle, Susana Raquel
author2_role author
author
author
author
dc.subject.none.fl_str_mv Biología
Papain
Aqueous–organic media
Catalytic stability
Structural stability
Thermal stability
Fluorescence spectroscopy
ATR-FTIR spectroscopy
topic Biología
Papain
Aqueous–organic media
Catalytic stability
Structural stability
Thermal stability
Fluorescence spectroscopy
ATR-FTIR spectroscopy
dc.description.none.fl_txt_mv The stability of papain was studied in aqueous–organic mixtures by means of residual proteolytic activity along with various spectroscopic analyses (fluorescence and ATR-FTIR combined with isotopic exchange with D2O). The investigated systems contained 1 or 10% (v/v) of an aqueous buffered solution (pH 8.0) in acetonitrile (ACN), methanol (MeOH) or dimethyl formamide (DMF). The results evidenced that papain retained almost all its catalytic activity after 24 h of incubation in the presence of ACN, and a more compact conformation of the enzyme was detected. Papain suffered an important loss of enzymatic activity (ca. 80%) after 24 h incubation in MeOH although, no global conformational change and minor secondary structure rearrangements were detected. This observation suggests that somehow the active site region was altered. On the other hand, papain suffered a complete inactivation when exposed to those media containing DMF. Fluorescence analyses revealed that an irreversible conformational change took place after 24 h incubation, and a moderate increase in b-sheet and b-turn structures was the most relevant finding when secondary structure was analyzed. The evidences demonstrated that the organic solvents induce a more rigid and compact structure of papain regardless of the organic:buffer ratio investigated. In turn, these modifications affect the active catalytic site in the particular case of MeOH and DMF. These findings were in agreement with the thermo-stability of the enzyme performed after heating at 353 K in all the studied media, that is the presence of ACN did not substantially affect the secondary structure of papain. Nevertheless, the a-helix domain demonstrated to be less thermally stable than the b-sheet domain, turning into aggregated structures after heating, especially in the presence of MeOH and DMF.
Centro de Investigación de Proteínas Vegetales
Centro de Investigación y Desarrollo en Ciencias Aplicadas
description The stability of papain was studied in aqueous–organic mixtures by means of residual proteolytic activity along with various spectroscopic analyses (fluorescence and ATR-FTIR combined with isotopic exchange with D2O). The investigated systems contained 1 or 10% (v/v) of an aqueous buffered solution (pH 8.0) in acetonitrile (ACN), methanol (MeOH) or dimethyl formamide (DMF). The results evidenced that papain retained almost all its catalytic activity after 24 h of incubation in the presence of ACN, and a more compact conformation of the enzyme was detected. Papain suffered an important loss of enzymatic activity (ca. 80%) after 24 h incubation in MeOH although, no global conformational change and minor secondary structure rearrangements were detected. This observation suggests that somehow the active site region was altered. On the other hand, papain suffered a complete inactivation when exposed to those media containing DMF. Fluorescence analyses revealed that an irreversible conformational change took place after 24 h incubation, and a moderate increase in b-sheet and b-turn structures was the most relevant finding when secondary structure was analyzed. The evidences demonstrated that the organic solvents induce a more rigid and compact structure of papain regardless of the organic:buffer ratio investigated. In turn, these modifications affect the active catalytic site in the particular case of MeOH and DMF. These findings were in agreement with the thermo-stability of the enzyme performed after heating at 353 K in all the studied media, that is the presence of ACN did not substantially affect the secondary structure of papain. Nevertheless, the a-helix domain demonstrated to be less thermally stable than the b-sheet domain, turning into aggregated structures after heating, especially in the presence of MeOH and DMF.
publishDate 2012
dc.date.none.fl_str_mv 2012
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
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status_str publishedVersion
dc.identifier.none.fl_str_mv http://sedici.unlp.edu.ar/handle/10915/112868
url http://sedici.unlp.edu.ar/handle/10915/112868
dc.language.none.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv info:eu-repo/semantics/altIdentifier/issn/1359-5113
info:eu-repo/semantics/altIdentifier/doi/10.1016/j.procbio.2011.10.003
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
http://creativecommons.org/licenses/by-nc-sa/4.0/
Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)
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rights_invalid_str_mv http://creativecommons.org/licenses/by-nc-sa/4.0/
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