Comparison of Communication/Synchronization Models in Parallel Programming on Multi-Core Cluster

Autores
Rucci, Enzo; Chichizola, Franco; De Giusti, Armando Eduardo; Naiouf, Marcelo; De Giusti, Laura Cristina; Simari, Guillermo Ricardo; Padovani, Hugo
Año de publicación
2011
Idioma
español castellano
Tipo de recurso
parte de libro
Estado
versión publicada
Descripción
Taking into account the increase in use of the multi-core cluster architecture, in this paper we analyze the use of the various communication models (message passing, shared memory, their combination) to efficiently exploit the power of the architecture. Smith-Waterman algorithm, whose parallelization is based on a pipeline scheme due to problem data dependence, is used as test case to determine the similarity degree of two DNA sequences. Finally, future research lines are mentioned, aimed at optimizing the use of memory levels in the architecture.
Red de Universidades con Carreras en Informática (RedUNCI)
Materia
Ciencias Informáticas
multi-core cluster
hybrid communication model
pipeline
Smith-Waterman
Nivel de accesibilidad
acceso abierto
Condiciones de uso
http://creativecommons.org/licenses/by-nc/4.0/
Repositorio
SEDICI (UNLP)
Institución
Universidad Nacional de La Plata
OAI Identificador
oai:sedici.unlp.edu.ar:10915/81222
Acceder
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repository_id_str 1329
network_name_str SEDICI (UNLP)
spelling Comparison of Communication/Synchronization Models in Parallel Programming on Multi-Core ClusterRucci, EnzoChichizola, FrancoDe Giusti, Armando EduardoNaiouf, MarceloDe Giusti, Laura CristinaSimari, Guillermo RicardoPadovani, HugoCiencias Informáticasmulti-core clusterhybrid communication modelpipelineSmith-WatermanTaking into account the increase in use of the multi-core cluster architecture, in this paper we analyze the use of the various communication models (message passing, shared memory, their combination) to efficiently exploit the power of the architecture. Smith-Waterman algorithm, whose parallelization is based on a pipeline scheme due to problem data dependence, is used as test case to determine the similarity degree of two DNA sequences. Finally, future research lines are mentioned, aimed at optimizing the use of memory levels in the architecture.Red de Universidades con Carreras en Informática (RedUNCI)Editorial de la Universidad Nacional de La Plata (EDULP)2011-03-31info:eu-repo/semantics/bookPartinfo:eu-repo/semantics/publishedVersionCapitulo de librohttp://purl.org/coar/resource_type/c_3248info:ar-repo/semantics/parteDeLibroapplication/pdf71-81http://sedici.unlp.edu.ar/handle/10915/81222spainfo:eu-repo/semantics/altIdentifier/isbn/978-950-34-0713-4info:eu-repo/semantics/reference/hdl/10915/18411info:eu-repo/semantics/openAccesshttp://creativecommons.org/licenses/by-nc/4.0/Creative Commons Attribution-NonCommercial 4.0 International (CC BY-NC 4.0)reponame:SEDICI (UNLP)instname:Universidad Nacional de La Platainstacron:UNLP2025-09-29T11:15:02Zoai:sedici.unlp.edu.ar:10915/81222Institucionalhttp://sedici.unlp.edu.ar/Universidad públicaNo correspondehttp://sedici.unlp.edu.ar/oai/snrdalira@sedici.unlp.edu.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:13292025-09-29 11:15:02.838SEDICI (UNLP) - Universidad Nacional de La Platafalse
dc.title.none.fl_str_mv Comparison of Communication/Synchronization Models in Parallel Programming on Multi-Core Cluster
title Comparison of Communication/Synchronization Models in Parallel Programming on Multi-Core Cluster
spellingShingle Comparison of Communication/Synchronization Models in Parallel Programming on Multi-Core Cluster
Rucci, Enzo
Ciencias Informáticas
multi-core cluster
hybrid communication model
pipeline
Smith-Waterman
title_short Comparison of Communication/Synchronization Models in Parallel Programming on Multi-Core Cluster
title_full Comparison of Communication/Synchronization Models in Parallel Programming on Multi-Core Cluster
title_fullStr Comparison of Communication/Synchronization Models in Parallel Programming on Multi-Core Cluster
title_full_unstemmed Comparison of Communication/Synchronization Models in Parallel Programming on Multi-Core Cluster
title_sort Comparison of Communication/Synchronization Models in Parallel Programming on Multi-Core Cluster
dc.creator.none.fl_str_mv Rucci, Enzo
Chichizola, Franco
De Giusti, Armando Eduardo
Naiouf, Marcelo
De Giusti, Laura Cristina
Simari, Guillermo Ricardo
Padovani, Hugo
author Rucci, Enzo
author_facet Rucci, Enzo
Chichizola, Franco
De Giusti, Armando Eduardo
Naiouf, Marcelo
De Giusti, Laura Cristina
Simari, Guillermo Ricardo
Padovani, Hugo
author_role author
author2 Chichizola, Franco
De Giusti, Armando Eduardo
Naiouf, Marcelo
De Giusti, Laura Cristina
Simari, Guillermo Ricardo
Padovani, Hugo
author2_role author
author
author
author
author
author
dc.subject.none.fl_str_mv Ciencias Informáticas
multi-core cluster
hybrid communication model
pipeline
Smith-Waterman
topic Ciencias Informáticas
multi-core cluster
hybrid communication model
pipeline
Smith-Waterman
dc.description.none.fl_txt_mv Taking into account the increase in use of the multi-core cluster architecture, in this paper we analyze the use of the various communication models (message passing, shared memory, their combination) to efficiently exploit the power of the architecture. Smith-Waterman algorithm, whose parallelization is based on a pipeline scheme due to problem data dependence, is used as test case to determine the similarity degree of two DNA sequences. Finally, future research lines are mentioned, aimed at optimizing the use of memory levels in the architecture.
Red de Universidades con Carreras en Informática (RedUNCI)
description Taking into account the increase in use of the multi-core cluster architecture, in this paper we analyze the use of the various communication models (message passing, shared memory, their combination) to efficiently exploit the power of the architecture. Smith-Waterman algorithm, whose parallelization is based on a pipeline scheme due to problem data dependence, is used as test case to determine the similarity degree of two DNA sequences. Finally, future research lines are mentioned, aimed at optimizing the use of memory levels in the architecture.
publishDate 2011
dc.date.none.fl_str_mv 2011-03-31
dc.type.none.fl_str_mv info:eu-repo/semantics/bookPart
info:eu-repo/semantics/publishedVersion
Capitulo de libro
http://purl.org/coar/resource_type/c_3248
info:ar-repo/semantics/parteDeLibro
format bookPart
status_str publishedVersion
dc.identifier.none.fl_str_mv http://sedici.unlp.edu.ar/handle/10915/81222
url http://sedici.unlp.edu.ar/handle/10915/81222
dc.language.none.fl_str_mv spa
language spa
dc.relation.none.fl_str_mv info:eu-repo/semantics/altIdentifier/isbn/978-950-34-0713-4
info:eu-repo/semantics/reference/hdl/10915/18411
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
http://creativecommons.org/licenses/by-nc/4.0/
Creative Commons Attribution-NonCommercial 4.0 International (CC BY-NC 4.0)
eu_rights_str_mv openAccess
rights_invalid_str_mv http://creativecommons.org/licenses/by-nc/4.0/
Creative Commons Attribution-NonCommercial 4.0 International (CC BY-NC 4.0)
dc.format.none.fl_str_mv application/pdf
71-81
dc.publisher.none.fl_str_mv Editorial de la Universidad Nacional de La Plata (EDULP)
publisher.none.fl_str_mv Editorial de la Universidad Nacional de La Plata (EDULP)
dc.source.none.fl_str_mv reponame:SEDICI (UNLP)
instname:Universidad Nacional de La Plata
instacron:UNLP
reponame_str SEDICI (UNLP)
collection SEDICI (UNLP)
instname_str Universidad Nacional de La Plata
instacron_str UNLP
institution UNLP
repository.name.fl_str_mv SEDICI (UNLP) - Universidad Nacional de La Plata
repository.mail.fl_str_mv alira@sedici.unlp.edu.ar
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score 13.070432

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