The mitochondrial genome of the semi-slug Omalonyx unguis (Gastropoda: Succineidae) and the phylogenetic relationships within Stylommatophora

Autores
Guzmán, Leila Belén; Vogler, Roberto Eugenio; Beltramino, Ariel Aníbal
Año de publicación
2021
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
Fil: Guzmán, Leila Belén. Universidad Nacional de Misiones. Instituto de Biología Subtropical; Argentina.
Fil: Guzmán, Leila Belén. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet (Nordeste). Instituto de Biología Subtropical; Argentina.
Fil: Vogler, Roberto Eugenio. Universidad Nacional de Misiones. Instituto de Biología Subtropical; Argentina.
Fil: Vogler, Roberto Eugenio. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet (Nordeste). Instituto de Biología Subtropical; Argentina.
Fil: Beltramino, Ariel Aníbal. Universidad Nacional de Misiones. Instituto de Biología Subtropical; Argentina.
Fil: Beltramino, Ariel Aníbal. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet (Nordeste). Instituto de Biología Subtropical; Argentina.
Here we report the first complete mitochondrial genome of the semi-slug Omalonyx unguis (d’Orbigny, 1836) (Gastropoda: Succineidae). Sequencing was performed on a specimen from Argentina. Assembly was performed using Sanger data and Illumina next generation sequencing (NGS). The mitogenome was 13,984 bp in length and encoded the 37 typical Metazoan genes. A potential origin for mitochondrial DNA replication was found in a noncoding intergenic spacer (49 bp) located between cox3 and tRNA-Ile genes, and its secondary structure was characterized. Secondary structure models of the tRNA genes of O. unguis largely agreed with those proposed for other mollusks. Secondary structure models for the two rRNA genes were also obtained. To our knowledge, the 12S-rRNA model derived here is the first complete one available for mollusks. Phylogenetic analyses based on the mitogenomes of O. unguis and 37 other species of Stylommatophora were performed using amino acid sequences from the 13 protein-coding genes. Our results located Succineoidea as a sister group of Helicoidea + Urocoptoidea, similar to previous studies based on mitochondrial genomes. The gene arrangement of O. unguis was identical to that reported for another species of Succineoidea. The unique rearrangements observed for this group within Stylommatophora, may constitute synapomorphies for the superfamily.
Materia
Mitochondrial
Genomics
Phylogenetic
Gastropods
Nivel de accesibilidad
acceso abierto
Condiciones de uso
Atribución-NoComercial-CompartirIgual 4.0 Internacional
Repositorio
Repositorio Institucional Digital de la Universidad Nacional de Misiones (UNaM)
Institución
Universidad Nacional de Misiones
OAI Identificador
oai:rid.unam.edu.ar:20.500.12219/5429
Acceder
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spelling The mitochondrial genome of the semi-slug Omalonyx unguis (Gastropoda: Succineidae) and the phylogenetic relationships within StylommatophoraGuzmán, Leila BelénVogler, Roberto EugenioBeltramino, Ariel AníbalMitochondrialGenomicsPhylogeneticGastropodsFil: Guzmán, Leila Belén. Universidad Nacional de Misiones. Instituto de Biología Subtropical; Argentina.Fil: Guzmán, Leila Belén. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet (Nordeste). Instituto de Biología Subtropical; Argentina.Fil: Vogler, Roberto Eugenio. Universidad Nacional de Misiones. Instituto de Biología Subtropical; Argentina.Fil: Vogler, Roberto Eugenio. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet (Nordeste). Instituto de Biología Subtropical; Argentina.Fil: Beltramino, Ariel Aníbal. Universidad Nacional de Misiones. Instituto de Biología Subtropical; Argentina.Fil: Beltramino, Ariel Aníbal. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet (Nordeste). Instituto de Biología Subtropical; Argentina.Here we report the first complete mitochondrial genome of the semi-slug Omalonyx unguis (d’Orbigny, 1836) (Gastropoda: Succineidae). Sequencing was performed on a specimen from Argentina. Assembly was performed using Sanger data and Illumina next generation sequencing (NGS). The mitogenome was 13,984 bp in length and encoded the 37 typical Metazoan genes. A potential origin for mitochondrial DNA replication was found in a noncoding intergenic spacer (49 bp) located between cox3 and tRNA-Ile genes, and its secondary structure was characterized. Secondary structure models of the tRNA genes of O. unguis largely agreed with those proposed for other mollusks. Secondary structure models for the two rRNA genes were also obtained. To our knowledge, the 12S-rRNA model derived here is the first complete one available for mollusks. Phylogenetic analyses based on the mitogenomes of O. unguis and 37 other species of Stylommatophora were performed using amino acid sequences from the 13 protein-coding genes. Our results located Succineoidea as a sister group of Helicoidea + Urocoptoidea, similar to previous studies based on mitochondrial genomes. The gene arrangement of O. unguis was identical to that reported for another species of Succineoidea. The unique rearrangements observed for this group within Stylommatophora, may constitute synapomorphies for the superfamily.Public Library of Science2021-06-25info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdf4.3 MBhttps://hdl.handle.net/20.500.12219/5429enginfo:eu-repo/semantics/altIdentifier/urn/https://ri.conicet.gov.ar/bitstream/handle/11336/175740/CONICET_Digital_Nro.9e7080ba-92b4-4889-9661-a124cdd4c52a_B.pdf?sequence=2&isAllowed=yinfo:eu-repo/semantics/altIdentifier/doi/https://doi.org/10.1371/journal.pone.0253724info:eu-repo/semantics/altIdentifier/hdl/http://hdl.handle.net/11336/175740info:eu-repo/semantics/openAccessAtribución-NoComercial-CompartirIgual 4.0 Internacionalhttp://creativecommons.org/licenses/by-nc-sa/4.0/reponame:Repositorio Institucional Digital de la Universidad Nacional de Misiones (UNaM)instname:Universidad Nacional de Misiones2025-09-29T15:02:23Zoai:rid.unam.edu.ar:20.500.12219/5429instacron:UNAMInstitucionalhttps://rid.unam.edu.ar/Universidad públicahttps://www.unam.edu.ar/https://rid.unam.edu.ar/oai/rsnrdArgentinaopendoar:2025-09-29 15:02:23.588Repositorio Institucional Digital de la Universidad Nacional de Misiones (UNaM) - Universidad Nacional de Misionesfalse
dc.title.none.fl_str_mv The mitochondrial genome of the semi-slug Omalonyx unguis (Gastropoda: Succineidae) and the phylogenetic relationships within Stylommatophora
title The mitochondrial genome of the semi-slug Omalonyx unguis (Gastropoda: Succineidae) and the phylogenetic relationships within Stylommatophora
spellingShingle The mitochondrial genome of the semi-slug Omalonyx unguis (Gastropoda: Succineidae) and the phylogenetic relationships within Stylommatophora
Guzmán, Leila Belén
Mitochondrial
Genomics
Phylogenetic
Gastropods
title_short The mitochondrial genome of the semi-slug Omalonyx unguis (Gastropoda: Succineidae) and the phylogenetic relationships within Stylommatophora
title_full The mitochondrial genome of the semi-slug Omalonyx unguis (Gastropoda: Succineidae) and the phylogenetic relationships within Stylommatophora
title_fullStr The mitochondrial genome of the semi-slug Omalonyx unguis (Gastropoda: Succineidae) and the phylogenetic relationships within Stylommatophora
title_full_unstemmed The mitochondrial genome of the semi-slug Omalonyx unguis (Gastropoda: Succineidae) and the phylogenetic relationships within Stylommatophora
title_sort The mitochondrial genome of the semi-slug Omalonyx unguis (Gastropoda: Succineidae) and the phylogenetic relationships within Stylommatophora
dc.creator.none.fl_str_mv Guzmán, Leila Belén
Vogler, Roberto Eugenio
Beltramino, Ariel Aníbal
author Guzmán, Leila Belén
author_facet Guzmán, Leila Belén
Vogler, Roberto Eugenio
Beltramino, Ariel Aníbal
author_role author
author2 Vogler, Roberto Eugenio
Beltramino, Ariel Aníbal
author2_role author
author
dc.subject.none.fl_str_mv Mitochondrial
Genomics
Phylogenetic
Gastropods
topic Mitochondrial
Genomics
Phylogenetic
Gastropods
dc.description.none.fl_txt_mv Fil: Guzmán, Leila Belén. Universidad Nacional de Misiones. Instituto de Biología Subtropical; Argentina.
Fil: Guzmán, Leila Belén. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet (Nordeste). Instituto de Biología Subtropical; Argentina.
Fil: Vogler, Roberto Eugenio. Universidad Nacional de Misiones. Instituto de Biología Subtropical; Argentina.
Fil: Vogler, Roberto Eugenio. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet (Nordeste). Instituto de Biología Subtropical; Argentina.
Fil: Beltramino, Ariel Aníbal. Universidad Nacional de Misiones. Instituto de Biología Subtropical; Argentina.
Fil: Beltramino, Ariel Aníbal. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet (Nordeste). Instituto de Biología Subtropical; Argentina.
Here we report the first complete mitochondrial genome of the semi-slug Omalonyx unguis (d’Orbigny, 1836) (Gastropoda: Succineidae). Sequencing was performed on a specimen from Argentina. Assembly was performed using Sanger data and Illumina next generation sequencing (NGS). The mitogenome was 13,984 bp in length and encoded the 37 typical Metazoan genes. A potential origin for mitochondrial DNA replication was found in a noncoding intergenic spacer (49 bp) located between cox3 and tRNA-Ile genes, and its secondary structure was characterized. Secondary structure models of the tRNA genes of O. unguis largely agreed with those proposed for other mollusks. Secondary structure models for the two rRNA genes were also obtained. To our knowledge, the 12S-rRNA model derived here is the first complete one available for mollusks. Phylogenetic analyses based on the mitogenomes of O. unguis and 37 other species of Stylommatophora were performed using amino acid sequences from the 13 protein-coding genes. Our results located Succineoidea as a sister group of Helicoidea + Urocoptoidea, similar to previous studies based on mitochondrial genomes. The gene arrangement of O. unguis was identical to that reported for another species of Succineoidea. The unique rearrangements observed for this group within Stylommatophora, may constitute synapomorphies for the superfamily.
description Fil: Guzmán, Leila Belén. Universidad Nacional de Misiones. Instituto de Biología Subtropical; Argentina.
publishDate 2021
dc.date.none.fl_str_mv 2021-06-25
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv https://hdl.handle.net/20.500.12219/5429
url https://hdl.handle.net/20.500.12219/5429
dc.language.none.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv info:eu-repo/semantics/altIdentifier/urn/https://ri.conicet.gov.ar/bitstream/handle/11336/175740/CONICET_Digital_Nro.9e7080ba-92b4-4889-9661-a124cdd4c52a_B.pdf?sequence=2&isAllowed=y
info:eu-repo/semantics/altIdentifier/doi/https://doi.org/10.1371/journal.pone.0253724
info:eu-repo/semantics/altIdentifier/hdl/http://hdl.handle.net/11336/175740
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
Atribución-NoComercial-CompartirIgual 4.0 Internacional
http://creativecommons.org/licenses/by-nc-sa/4.0/
eu_rights_str_mv openAccess
rights_invalid_str_mv Atribución-NoComercial-CompartirIgual 4.0 Internacional
http://creativecommons.org/licenses/by-nc-sa/4.0/
dc.format.none.fl_str_mv application/pdf
application/pdf
4.3 MB
dc.publisher.none.fl_str_mv Public Library of Science
publisher.none.fl_str_mv Public Library of Science
dc.source.none.fl_str_mv reponame:Repositorio Institucional Digital de la Universidad Nacional de Misiones (UNaM)
instname:Universidad Nacional de Misiones
reponame_str Repositorio Institucional Digital de la Universidad Nacional de Misiones (UNaM)
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instname_str Universidad Nacional de Misiones
repository.name.fl_str_mv Repositorio Institucional Digital de la Universidad Nacional de Misiones (UNaM) - Universidad Nacional de Misiones
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