A plurality of morphological characters need not equate with phylogenetic accuracy: A rare genomic change refutes the placement of Solifugae and Pseudoscorpiones in Haplocnemata

Autores
Gainett, Guilherme; Klementz, Benjamin C.; Setton, Emily V. W.; Simian, Catalina; Iuri, Hernán A.; Edgecombe, Gregory D.; Peretti, Alfredo V.; Sharma, Prashant P.
Año de publicación
2023
Idioma
español castellano
Tipo de recurso
artículo
Estado
versión publicada
Descripción
Fil: Gainett, Guilherme. University of Wisconsin‐Madison. Department of Integrative Biology; United State of America.
Fil: Klementz, Benjamin C. University of Wisconsin‐Madison. Department of Integrative Biology; United State of America.
Fil: Setton, Emily V. W. University of Wisconsin‐Madison. Department of Integrative Biology; United State of America.
Fil: Simian, Catalina. Consejo Nacional de Investigaciones Científicas Técnicas. Laboratorio de Biología Reproductiva y Evolución; Argentina.
Fil: Simian, Catalina. Universidad Nacional de Córdoba. Facultad de Ciencias Exactas, Físicas y Naturales. Instituto de Diversidad y Ecología Animal. Departamento de Diversidad Biológica y Ecología; Argentina.
Fil: Iuri, Hernán A. Museo Argentino de Ciencias Naturales “Bernardino Rivadavia”. División de Aracnología; Argentina.
Fil: Edgecombe, Gregory D. The Natural History Museum, London. Department of Earth Sciences. Division ES Invertebrates and Plants Palaeobiology; United Kingdom
Fil: Peretti, Alfredo V. Universidad Nacional de Córdoba. Facultad de Ciencias Exactas, Físicas y Naturales. Instituto de Diversidad y Ecología Animal. Departamento de Diversidad Biológica y Ecología; Argentina.
Fil: Peretti, Alfredo V. Consejo Nacional de Investigaciones Científicas Técnicas. Laboratorio de Biología Reproductiva y Evolución; Argentina.
Fil: Sharma, Prashant P. University of Wisconsin‐Madison. Department of Integrative Biology; United State of America.
Abstract: Recent advances in higher‐level invertebrate phylogeny have leveraged shared features of genomic architecture to resolve contentious nodes across the tree of life. Yet, the interordinal relationships within Chelicerata have remained recalcitrant given competing topologies in recent molecular analyses. As such, relationships between topologically unstable orders remain supported primarily by morphological cladistic analyses. Solifugae, one such unstable chelicerate order, has long been thought to be the sister group of Pseudoscorpiones, forming the clade Haplocnemata, on the basis of eight putative morphological synapomorphies. The discovery, however, of a shared whole genome duplication placing Pseudoscorpiones in Arachnopulmonata provides the opportunity for a simple litmus test evaluating the validity of Haplocnemata. Here, we present the first developmental transcriptome of a solifuge (Titanopuga salinarum) and survey copy numbers of the homeobox genes for evidence of systemic duplication. We find that over 70% of the identified homeobox genes in T. salinarum are retained in a single copy, while representatives of the arachnopulmonates retain orthologs of those genes as two or more copies. Our results refute the placement of Solifugae in Haplocnemata. Subsequent reevaluation of putative interordinal morphologi- cal synapomorphies among chelicerates reveals a high incidence of homoplasy, reversals, and inaccurate coding within Haplocnemata and other small clades, as well as Arachnida more broadly, suggesting existing morphological character matrices are insufficient to resolve chelicerate phylogeny.
info:eu-repo/semantics/publishedVersion
Fil: Gainett, Guilherme. University of Wisconsin‐Madison. Department of Integrative Biology; United State of America.
Fil: Klementz, Benjamin C. University of Wisconsin‐Madison. Department of Integrative Biology; United State of America.
Fil: Setton, Emily V. W. University of Wisconsin‐Madison. Department of Integrative Biology; United State of America.
Fil: Simian, Catalina. Consejo Nacional de Investigaciones Científicas Técnicas. Laboratorio de Biología Reproductiva y Evolución; Argentina.
Fil: Simian, Catalina. Universidad Nacional de Córdoba. Facultad de Ciencias Exactas, Físicas y Naturales. Instituto de Diversidad y Ecología Animal. Departamento de Diversidad Biológica y Ecología; Argentina.
Fil: Iuri, Hernán A. Museo Argentino de Ciencias Naturales “Bernardino Rivadavia”. División de Aracnología; Argentina.
Fil: Edgecombe, Gregory D. The Natural History Museum, London. Department of Earth Sciences. Division ES Invertebrates and Plants Palaeobiology; United Kingdom
Fil: Peretti, Alfredo V. Universidad Nacional de Córdoba. Facultad de Ciencias Exactas, Físicas y Naturales. Instituto de Diversidad y Ecología Animal. Departamento de Diversidad Biológica y Ecología; Argentina.
Fil: Peretti, Alfredo V. Consejo Nacional de Investigaciones Científicas Técnicas. Laboratorio de Biología Reproductiva y Evolución; Argentina.
Fil: Sharma, Prashant P. University of Wisconsin‐Madison. Department of Integrative Biology; United State of America.
Materia
Arachnopulmonata
Genome duplication
Paralogy
Pseudoscorpiones
Rare genomic changes
Solifugae
Nivel de accesibilidad
acceso abierto
Condiciones de uso
Repositorio
Repositorio Digital Universitario (UNC)
Institución
Universidad Nacional de Córdoba
OAI Identificador
oai:rdu.unc.edu.ar:11086/552527
Acceder
id RDUUNC_7b1083e65b5312de2bc59c4c5c578d5e
oai_identifier_str oai:rdu.unc.edu.ar:11086/552527
network_acronym_str RDUUNC
repository_id_str 2572
network_name_str Repositorio Digital Universitario (UNC)
spelling A plurality of morphological characters need not equate with phylogenetic accuracy: A rare genomic change refutes the placement of Solifugae and Pseudoscorpiones in HaplocnemataGainett, GuilhermeKlementz, Benjamin C.Setton, Emily V. W.Simian, CatalinaIuri, Hernán A.Edgecombe, Gregory D.Peretti, Alfredo V.Sharma, Prashant P.ArachnopulmonataGenome duplicationParalogyPseudoscorpionesRare genomic changesSolifugaeFil: Gainett, Guilherme. University of Wisconsin‐Madison. Department of Integrative Biology; United State of America.Fil: Klementz, Benjamin C. University of Wisconsin‐Madison. Department of Integrative Biology; United State of America.Fil: Setton, Emily V. W. University of Wisconsin‐Madison. Department of Integrative Biology; United State of America.Fil: Simian, Catalina. Consejo Nacional de Investigaciones Científicas Técnicas. Laboratorio de Biología Reproductiva y Evolución; Argentina.Fil: Simian, Catalina. Universidad Nacional de Córdoba. Facultad de Ciencias Exactas, Físicas y Naturales. Instituto de Diversidad y Ecología Animal. Departamento de Diversidad Biológica y Ecología; Argentina.Fil: Iuri, Hernán A. Museo Argentino de Ciencias Naturales “Bernardino Rivadavia”. División de Aracnología; Argentina.Fil: Edgecombe, Gregory D. The Natural History Museum, London. Department of Earth Sciences. Division ES Invertebrates and Plants Palaeobiology; United KingdomFil: Peretti, Alfredo V. Universidad Nacional de Córdoba. Facultad de Ciencias Exactas, Físicas y Naturales. Instituto de Diversidad y Ecología Animal. Departamento de Diversidad Biológica y Ecología; Argentina.Fil: Peretti, Alfredo V. Consejo Nacional de Investigaciones Científicas Técnicas. Laboratorio de Biología Reproductiva y Evolución; Argentina.Fil: Sharma, Prashant P. University of Wisconsin‐Madison. Department of Integrative Biology; United State of America.Abstract: Recent advances in higher‐level invertebrate phylogeny have leveraged shared features of genomic architecture to resolve contentious nodes across the tree of life. Yet, the interordinal relationships within Chelicerata have remained recalcitrant given competing topologies in recent molecular analyses. As such, relationships between topologically unstable orders remain supported primarily by morphological cladistic analyses. Solifugae, one such unstable chelicerate order, has long been thought to be the sister group of Pseudoscorpiones, forming the clade Haplocnemata, on the basis of eight putative morphological synapomorphies. The discovery, however, of a shared whole genome duplication placing Pseudoscorpiones in Arachnopulmonata provides the opportunity for a simple litmus test evaluating the validity of Haplocnemata. Here, we present the first developmental transcriptome of a solifuge (Titanopuga salinarum) and survey copy numbers of the homeobox genes for evidence of systemic duplication. We find that over 70% of the identified homeobox genes in T. salinarum are retained in a single copy, while representatives of the arachnopulmonates retain orthologs of those genes as two or more copies. Our results refute the placement of Solifugae in Haplocnemata. Subsequent reevaluation of putative interordinal morphologi- cal synapomorphies among chelicerates reveals a high incidence of homoplasy, reversals, and inaccurate coding within Haplocnemata and other small clades, as well as Arachnida more broadly, suggesting existing morphological character matrices are insufficient to resolve chelicerate phylogeny.info:eu-repo/semantics/publishedVersionFil: Gainett, Guilherme. University of Wisconsin‐Madison. Department of Integrative Biology; United State of America.Fil: Klementz, Benjamin C. University of Wisconsin‐Madison. Department of Integrative Biology; United State of America.Fil: Setton, Emily V. W. University of Wisconsin‐Madison. Department of Integrative Biology; United State of America.Fil: Simian, Catalina. Consejo Nacional de Investigaciones Científicas Técnicas. Laboratorio de Biología Reproductiva y Evolución; Argentina.Fil: Simian, Catalina. Universidad Nacional de Córdoba. Facultad de Ciencias Exactas, Físicas y Naturales. Instituto de Diversidad y Ecología Animal. Departamento de Diversidad Biológica y Ecología; Argentina.Fil: Iuri, Hernán A. Museo Argentino de Ciencias Naturales “Bernardino Rivadavia”. División de Aracnología; Argentina.Fil: Edgecombe, Gregory D. The Natural History Museum, London. Department of Earth Sciences. Division ES Invertebrates and Plants Palaeobiology; United KingdomFil: Peretti, Alfredo V. Universidad Nacional de Córdoba. Facultad de Ciencias Exactas, Físicas y Naturales. Instituto de Diversidad y Ecología Animal. Departamento de Diversidad Biológica y Ecología; Argentina.Fil: Peretti, Alfredo V. Consejo Nacional de Investigaciones Científicas Técnicas. Laboratorio de Biología Reproductiva y Evolución; Argentina.Fil: Sharma, Prashant P. University of Wisconsin‐Madison. Department of Integrative Biology; United State of America.https://orcid.org/0000-0002-2328-90842023-12info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfGainett, Guilherme; Klementz, Benjamin C.; Setton, Emily V. W.; Simian, Catalina; Iuri, Hernán Augusto; et al.; A plurality of morphological characters need not equate with phylogenetic accuracy: A rare genomic change refutes the placement of Solifugae and Pseudoscorpiones in Haplocnemata; Wiley Blackwell Publishing, Inc; Evolution & Development; e12467; 12-2023; 1-181520-541Xhttp://hdl.handle.net/11086/552527spainfo:eu-repo/semantics/openAccessreponame:Repositorio Digital Universitario (UNC)instname:Universidad Nacional de Córdobainstacron:UNC2025-09-29T13:44:08Zoai:rdu.unc.edu.ar:11086/552527Institucionalhttps://rdu.unc.edu.ar/Universidad públicaNo correspondehttp://rdu.unc.edu.ar/oai/snrdoca.unc@gmail.comArgentinaNo correspondeNo correspondeNo correspondeopendoar:25722025-09-29 13:44:08.382Repositorio Digital Universitario (UNC) - Universidad Nacional de Córdobafalse
dc.title.none.fl_str_mv A plurality of morphological characters need not equate with phylogenetic accuracy: A rare genomic change refutes the placement of Solifugae and Pseudoscorpiones in Haplocnemata
title A plurality of morphological characters need not equate with phylogenetic accuracy: A rare genomic change refutes the placement of Solifugae and Pseudoscorpiones in Haplocnemata
spellingShingle A plurality of morphological characters need not equate with phylogenetic accuracy: A rare genomic change refutes the placement of Solifugae and Pseudoscorpiones in Haplocnemata
Gainett, Guilherme
Arachnopulmonata
Genome duplication
Paralogy
Pseudoscorpiones
Rare genomic changes
Solifugae
title_short A plurality of morphological characters need not equate with phylogenetic accuracy: A rare genomic change refutes the placement of Solifugae and Pseudoscorpiones in Haplocnemata
title_full A plurality of morphological characters need not equate with phylogenetic accuracy: A rare genomic change refutes the placement of Solifugae and Pseudoscorpiones in Haplocnemata
title_fullStr A plurality of morphological characters need not equate with phylogenetic accuracy: A rare genomic change refutes the placement of Solifugae and Pseudoscorpiones in Haplocnemata
title_full_unstemmed A plurality of morphological characters need not equate with phylogenetic accuracy: A rare genomic change refutes the placement of Solifugae and Pseudoscorpiones in Haplocnemata
title_sort A plurality of morphological characters need not equate with phylogenetic accuracy: A rare genomic change refutes the placement of Solifugae and Pseudoscorpiones in Haplocnemata
dc.creator.none.fl_str_mv Gainett, Guilherme
Klementz, Benjamin C.
Setton, Emily V. W.
Simian, Catalina
Iuri, Hernán A.
Edgecombe, Gregory D.
Peretti, Alfredo V.
Sharma, Prashant P.
author Gainett, Guilherme
author_facet Gainett, Guilherme
Klementz, Benjamin C.
Setton, Emily V. W.
Simian, Catalina
Iuri, Hernán A.
Edgecombe, Gregory D.
Peretti, Alfredo V.
Sharma, Prashant P.
author_role author
author2 Klementz, Benjamin C.
Setton, Emily V. W.
Simian, Catalina
Iuri, Hernán A.
Edgecombe, Gregory D.
Peretti, Alfredo V.
Sharma, Prashant P.
author2_role author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv https://orcid.org/0000-0002-2328-9084
dc.subject.none.fl_str_mv Arachnopulmonata
Genome duplication
Paralogy
Pseudoscorpiones
Rare genomic changes
Solifugae
topic Arachnopulmonata
Genome duplication
Paralogy
Pseudoscorpiones
Rare genomic changes
Solifugae
dc.description.none.fl_txt_mv Fil: Gainett, Guilherme. University of Wisconsin‐Madison. Department of Integrative Biology; United State of America.
Fil: Klementz, Benjamin C. University of Wisconsin‐Madison. Department of Integrative Biology; United State of America.
Fil: Setton, Emily V. W. University of Wisconsin‐Madison. Department of Integrative Biology; United State of America.
Fil: Simian, Catalina. Consejo Nacional de Investigaciones Científicas Técnicas. Laboratorio de Biología Reproductiva y Evolución; Argentina.
Fil: Simian, Catalina. Universidad Nacional de Córdoba. Facultad de Ciencias Exactas, Físicas y Naturales. Instituto de Diversidad y Ecología Animal. Departamento de Diversidad Biológica y Ecología; Argentina.
Fil: Iuri, Hernán A. Museo Argentino de Ciencias Naturales “Bernardino Rivadavia”. División de Aracnología; Argentina.
Fil: Edgecombe, Gregory D. The Natural History Museum, London. Department of Earth Sciences. Division ES Invertebrates and Plants Palaeobiology; United Kingdom
Fil: Peretti, Alfredo V. Universidad Nacional de Córdoba. Facultad de Ciencias Exactas, Físicas y Naturales. Instituto de Diversidad y Ecología Animal. Departamento de Diversidad Biológica y Ecología; Argentina.
Fil: Peretti, Alfredo V. Consejo Nacional de Investigaciones Científicas Técnicas. Laboratorio de Biología Reproductiva y Evolución; Argentina.
Fil: Sharma, Prashant P. University of Wisconsin‐Madison. Department of Integrative Biology; United State of America.
Abstract: Recent advances in higher‐level invertebrate phylogeny have leveraged shared features of genomic architecture to resolve contentious nodes across the tree of life. Yet, the interordinal relationships within Chelicerata have remained recalcitrant given competing topologies in recent molecular analyses. As such, relationships between topologically unstable orders remain supported primarily by morphological cladistic analyses. Solifugae, one such unstable chelicerate order, has long been thought to be the sister group of Pseudoscorpiones, forming the clade Haplocnemata, on the basis of eight putative morphological synapomorphies. The discovery, however, of a shared whole genome duplication placing Pseudoscorpiones in Arachnopulmonata provides the opportunity for a simple litmus test evaluating the validity of Haplocnemata. Here, we present the first developmental transcriptome of a solifuge (Titanopuga salinarum) and survey copy numbers of the homeobox genes for evidence of systemic duplication. We find that over 70% of the identified homeobox genes in T. salinarum are retained in a single copy, while representatives of the arachnopulmonates retain orthologs of those genes as two or more copies. Our results refute the placement of Solifugae in Haplocnemata. Subsequent reevaluation of putative interordinal morphologi- cal synapomorphies among chelicerates reveals a high incidence of homoplasy, reversals, and inaccurate coding within Haplocnemata and other small clades, as well as Arachnida more broadly, suggesting existing morphological character matrices are insufficient to resolve chelicerate phylogeny.
info:eu-repo/semantics/publishedVersion
Fil: Gainett, Guilherme. University of Wisconsin‐Madison. Department of Integrative Biology; United State of America.
Fil: Klementz, Benjamin C. University of Wisconsin‐Madison. Department of Integrative Biology; United State of America.
Fil: Setton, Emily V. W. University of Wisconsin‐Madison. Department of Integrative Biology; United State of America.
Fil: Simian, Catalina. Consejo Nacional de Investigaciones Científicas Técnicas. Laboratorio de Biología Reproductiva y Evolución; Argentina.
Fil: Simian, Catalina. Universidad Nacional de Córdoba. Facultad de Ciencias Exactas, Físicas y Naturales. Instituto de Diversidad y Ecología Animal. Departamento de Diversidad Biológica y Ecología; Argentina.
Fil: Iuri, Hernán A. Museo Argentino de Ciencias Naturales “Bernardino Rivadavia”. División de Aracnología; Argentina.
Fil: Edgecombe, Gregory D. The Natural History Museum, London. Department of Earth Sciences. Division ES Invertebrates and Plants Palaeobiology; United Kingdom
Fil: Peretti, Alfredo V. Universidad Nacional de Córdoba. Facultad de Ciencias Exactas, Físicas y Naturales. Instituto de Diversidad y Ecología Animal. Departamento de Diversidad Biológica y Ecología; Argentina.
Fil: Peretti, Alfredo V. Consejo Nacional de Investigaciones Científicas Técnicas. Laboratorio de Biología Reproductiva y Evolución; Argentina.
Fil: Sharma, Prashant P. University of Wisconsin‐Madison. Department of Integrative Biology; United State of America.
description Fil: Gainett, Guilherme. University of Wisconsin‐Madison. Department of Integrative Biology; United State of America.
publishDate 2023
dc.date.none.fl_str_mv 2023-12
dc.type.none.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/article
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
status_str publishedVersion
format article
dc.identifier.none.fl_str_mv Gainett, Guilherme; Klementz, Benjamin C.; Setton, Emily V. W.; Simian, Catalina; Iuri, Hernán Augusto; et al.; A plurality of morphological characters need not equate with phylogenetic accuracy: A rare genomic change refutes the placement of Solifugae and Pseudoscorpiones in Haplocnemata; Wiley Blackwell Publishing, Inc; Evolution & Development; e12467; 12-2023; 1-18
1520-541X
http://hdl.handle.net/11086/552527
identifier_str_mv Gainett, Guilherme; Klementz, Benjamin C.; Setton, Emily V. W.; Simian, Catalina; Iuri, Hernán Augusto; et al.; A plurality of morphological characters need not equate with phylogenetic accuracy: A rare genomic change refutes the placement of Solifugae and Pseudoscorpiones in Haplocnemata; Wiley Blackwell Publishing, Inc; Evolution & Development; e12467; 12-2023; 1-18
1520-541X
url http://hdl.handle.net/11086/552527
dc.language.none.fl_str_mv spa
language spa
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
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reponame_str Repositorio Digital Universitario (UNC)
collection Repositorio Digital Universitario (UNC)
instname_str Universidad Nacional de Córdoba
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institution UNC
repository.name.fl_str_mv Repositorio Digital Universitario (UNC) - Universidad Nacional de Córdoba
repository.mail.fl_str_mv oca.unc@gmail.com
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