A global-temporal analysis on Phytophthora sojae resistance-gene efficacy

Autores
McCoy, Austin; Belange, Richard; Bradley, Carl; Cerritos-Garcia, Daniel; Garnica, Vinicius; Giesler, Loren; Grijalba, Pablo Enrique; Guillin, Eduardo Alejandro; Henriquez, Maria; Kim, Yong Min; Malvick, Dean; Matthiesen, Rashelle; Mideros, Santiago; Noel, Zachary; Robertson, Alison; Roth, Mitchell; Schmidt, Clarice; Smith, Damon; Sparks, Adam; Telenko, Darcy; Tremblay, Vanessa; Wally, Owen; Chilvers, Martin
Año de publicación
2023
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
Plant disease resistance genes are widely used in agriculture to reduce disease outbreaks and epidemics and ensure global food security. In soybean, Rps (Resistance to Phytophthora sojae) genes are used to manage Phytophthora sojae, a major oomycete pathogen that causes Phytophthora stem and root rot (PRR) worldwide. This study aims to identify temporal changes in P. sojae pathotype complexity, diversity, and Rps gene efficacy. Pathotype data was collected from 5121 isolates of P. sojae, derived from 29 surveys conducted between 1990 and 2019 across the United States, Argentina, Canada, and China. This systematic review shows a loss of efficacy of specific Rps genes utilized for disease management and a significant increase in the pathotype diversity of isolates over time. This study finds that the most widely deployed Rps genes used to manage PRR globally, Rps1a, Rps1c and Rps1k, are no longer effective for PRR management in the United States, Argentina, and Canada. This systematic review emphasizes the need to widely introduce new sources of resistance to P. sojae, such as Rps3a, Rps6, or Rps11, into commercial cultivars to effectively manage PRR going forward.
AER Quines, INTA
Fil: McCoy, Austin. Michigan State University; Estados Unidos
Fil: Belange, Richard. Université Laval; Canadá
Fil: Bradley, Carl. University of Kentucky; Estados Unidos
Fil: Cerritos-Garcia, Daniel. University of Connecticut; Estados Unidos
Fil: Garnica, Vinicius. North Carolina State University; Estados Unidos
Fil: Giesler, Loren. University of Nebraska-Lincoln; Estados Unidos
Fil: Grijalba, Pablo. Universidad de Buenos Aires; Argentina
Fil: Guillin, Eduardo Alejandro. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria San Luis. Agencia de Extensión Rural Quines; Argentina
Fil: Henriquez, Maria. Agriculture and Agri-Food Canada ( Morden); Canadá
Fil: Kim, Yong Min. Agriculture and Agri-Food Canada ( Brandon); Canadá
Fil: Malvick, Dean. University of Minnesota; Estados Unidos
Fil: Matthiesen, Rashelle. Iowa State University; Estados Unidos
Fil: Mideros, Santiago. University of Illinois at Urbana-Champaign; Estados Unidos
Fil: Noel, Zachary. Auburn University; Estados Unidos
Fil: Robertson, Alison. Iowa State University; Estados Unidos
Fil: Roth, Mitchell. The Ohio State University-Wooster; Estados Unidos
Fil: Schmidt, Clarice. The Ohio State University-Wooster; Estados Unidos
Fil: Schmidt, Clarice. The Ohio State University-Wooster; Estados Unidos
Fil: Smith, Damon. University of Wisconsin-Madison; Estados Unidos
Fil: Sparks, Adam. University of Southern Queensland; Australia
Fil: Telenko, Darcy. Purdue University; Estados Unidos
Fil; Tremblay, Vanessa. Université Laval; Canadá
Fil: Wally, Owen. Agriculture and Agri-Food Canada ( Harrow); Canadá
Fil: Chilvers, Martin. Michigan State University; Estados Unidos
Fuente
Nature Communications 14 : 6043 (septiembre 2023)
Materia
Phytophthora
Plant Diseases
Genetics
Food Security
Enfermedades de las Plantas
Genética
Seguridad Alimentaria
Manejo de Enfermedades
Phytophthora sojae
Nivel de accesibilidad
acceso abierto
Condiciones de uso
http://creativecommons.org/licenses/by-nc-sa/4.0/
Repositorio
INTA Digital (INTA)
Institución
Instituto Nacional de Tecnología Agropecuaria
OAI Identificador
oai:localhost:20.500.12123/17091
Acceder
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oai_identifier_str oai:localhost:20.500.12123/17091
network_acronym_str INTADig
repository_id_str l
network_name_str INTA Digital (INTA)
spelling A global-temporal analysis on Phytophthora sojae resistance-gene efficacyMcCoy, AustinBelange, RichardBradley, CarlCerritos-Garcia, DanielGarnica, ViniciusGiesler, LorenGrijalba, Pablo EnriqueGuillin, Eduardo AlejandroHenriquez, MariaKim, Yong MinMalvick, DeanMatthiesen, RashelleMideros, SantiagoNoel, ZacharyRobertson, AlisonRoth, MitchellSchmidt, ClariceSmith, DamonSparks, AdamTelenko, DarcyTremblay, VanessaWally, OwenChilvers, MartinPhytophthoraPlant DiseasesGeneticsFood SecurityEnfermedades de las PlantasGenéticaSeguridad AlimentariaManejo de EnfermedadesPhytophthora sojaePlant disease resistance genes are widely used in agriculture to reduce disease outbreaks and epidemics and ensure global food security. In soybean, Rps (Resistance to Phytophthora sojae) genes are used to manage Phytophthora sojae, a major oomycete pathogen that causes Phytophthora stem and root rot (PRR) worldwide. This study aims to identify temporal changes in P. sojae pathotype complexity, diversity, and Rps gene efficacy. Pathotype data was collected from 5121 isolates of P. sojae, derived from 29 surveys conducted between 1990 and 2019 across the United States, Argentina, Canada, and China. This systematic review shows a loss of efficacy of specific Rps genes utilized for disease management and a significant increase in the pathotype diversity of isolates over time. This study finds that the most widely deployed Rps genes used to manage PRR globally, Rps1a, Rps1c and Rps1k, are no longer effective for PRR management in the United States, Argentina, and Canada. This systematic review emphasizes the need to widely introduce new sources of resistance to P. sojae, such as Rps3a, Rps6, or Rps11, into commercial cultivars to effectively manage PRR going forward.AER Quines, INTAFil: McCoy, Austin. Michigan State University; Estados UnidosFil: Belange, Richard. Université Laval; CanadáFil: Bradley, Carl. University of Kentucky; Estados UnidosFil: Cerritos-Garcia, Daniel. University of Connecticut; Estados UnidosFil: Garnica, Vinicius. North Carolina State University; Estados UnidosFil: Giesler, Loren. University of Nebraska-Lincoln; Estados UnidosFil: Grijalba, Pablo. Universidad de Buenos Aires; ArgentinaFil: Guillin, Eduardo Alejandro. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria San Luis. Agencia de Extensión Rural Quines; ArgentinaFil: Henriquez, Maria. Agriculture and Agri-Food Canada ( Morden); CanadáFil: Kim, Yong Min. Agriculture and Agri-Food Canada ( Brandon); CanadáFil: Malvick, Dean. University of Minnesota; Estados UnidosFil: Matthiesen, Rashelle. Iowa State University; Estados UnidosFil: Mideros, Santiago. University of Illinois at Urbana-Champaign; Estados UnidosFil: Noel, Zachary. Auburn University; Estados UnidosFil: Robertson, Alison. Iowa State University; Estados UnidosFil: Roth, Mitchell. The Ohio State University-Wooster; Estados UnidosFil: Schmidt, Clarice. The Ohio State University-Wooster; Estados UnidosFil: Schmidt, Clarice. The Ohio State University-Wooster; Estados UnidosFil: Smith, Damon. University of Wisconsin-Madison; Estados UnidosFil: Sparks, Adam. University of Southern Queensland; AustraliaFil: Telenko, Darcy. Purdue University; Estados UnidosFil; Tremblay, Vanessa. Université Laval; CanadáFil: Wally, Owen. Agriculture and Agri-Food Canada ( Harrow); CanadáFil: Chilvers, Martin. Michigan State University; Estados UnidosSpringer Nature2024-03-19T10:24:39Z2024-03-19T10:24:39Z2023-09-27info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfhttp://hdl.handle.net/20.500.12123/17091https://www.nature.com/articles/s41467-023-41321-72041-1723 (online)https://doi.org/10.1038/s41467-023-41321-7Nature Communications 14 : 6043 (septiembre 2023)reponame:INTA Digital (INTA)instname:Instituto Nacional de Tecnología Agropecuariaenginfo:eu-repo/semantics/openAccesshttp://creativecommons.org/licenses/by-nc-sa/4.0/Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)2025-10-16T09:31:32Zoai:localhost:20.500.12123/17091instacron:INTAInstitucionalhttp://repositorio.inta.gob.ar/Organismo científico-tecnológicoNo correspondehttp://repositorio.inta.gob.ar/oai/requesttripaldi.nicolas@inta.gob.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:l2025-10-16 09:31:33.072INTA Digital (INTA) - Instituto Nacional de Tecnología Agropecuariafalse
dc.title.none.fl_str_mv A global-temporal analysis on Phytophthora sojae resistance-gene efficacy
title A global-temporal analysis on Phytophthora sojae resistance-gene efficacy
spellingShingle A global-temporal analysis on Phytophthora sojae resistance-gene efficacy
McCoy, Austin
Phytophthora
Plant Diseases
Genetics
Food Security
Enfermedades de las Plantas
Genética
Seguridad Alimentaria
Manejo de Enfermedades
Phytophthora sojae
title_short A global-temporal analysis on Phytophthora sojae resistance-gene efficacy
title_full A global-temporal analysis on Phytophthora sojae resistance-gene efficacy
title_fullStr A global-temporal analysis on Phytophthora sojae resistance-gene efficacy
title_full_unstemmed A global-temporal analysis on Phytophthora sojae resistance-gene efficacy
title_sort A global-temporal analysis on Phytophthora sojae resistance-gene efficacy
dc.creator.none.fl_str_mv McCoy, Austin
Belange, Richard
Bradley, Carl
Cerritos-Garcia, Daniel
Garnica, Vinicius
Giesler, Loren
Grijalba, Pablo Enrique
Guillin, Eduardo Alejandro
Henriquez, Maria
Kim, Yong Min
Malvick, Dean
Matthiesen, Rashelle
Mideros, Santiago
Noel, Zachary
Robertson, Alison
Roth, Mitchell
Schmidt, Clarice
Smith, Damon
Sparks, Adam
Telenko, Darcy
Tremblay, Vanessa
Wally, Owen
Chilvers, Martin
author McCoy, Austin
author_facet McCoy, Austin
Belange, Richard
Bradley, Carl
Cerritos-Garcia, Daniel
Garnica, Vinicius
Giesler, Loren
Grijalba, Pablo Enrique
Guillin, Eduardo Alejandro
Henriquez, Maria
Kim, Yong Min
Malvick, Dean
Matthiesen, Rashelle
Mideros, Santiago
Noel, Zachary
Robertson, Alison
Roth, Mitchell
Schmidt, Clarice
Smith, Damon
Sparks, Adam
Telenko, Darcy
Tremblay, Vanessa
Wally, Owen
Chilvers, Martin
author_role author
author2 Belange, Richard
Bradley, Carl
Cerritos-Garcia, Daniel
Garnica, Vinicius
Giesler, Loren
Grijalba, Pablo Enrique
Guillin, Eduardo Alejandro
Henriquez, Maria
Kim, Yong Min
Malvick, Dean
Matthiesen, Rashelle
Mideros, Santiago
Noel, Zachary
Robertson, Alison
Roth, Mitchell
Schmidt, Clarice
Smith, Damon
Sparks, Adam
Telenko, Darcy
Tremblay, Vanessa
Wally, Owen
Chilvers, Martin
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.subject.none.fl_str_mv Phytophthora
Plant Diseases
Genetics
Food Security
Enfermedades de las Plantas
Genética
Seguridad Alimentaria
Manejo de Enfermedades
Phytophthora sojae
topic Phytophthora
Plant Diseases
Genetics
Food Security
Enfermedades de las Plantas
Genética
Seguridad Alimentaria
Manejo de Enfermedades
Phytophthora sojae
dc.description.none.fl_txt_mv Plant disease resistance genes are widely used in agriculture to reduce disease outbreaks and epidemics and ensure global food security. In soybean, Rps (Resistance to Phytophthora sojae) genes are used to manage Phytophthora sojae, a major oomycete pathogen that causes Phytophthora stem and root rot (PRR) worldwide. This study aims to identify temporal changes in P. sojae pathotype complexity, diversity, and Rps gene efficacy. Pathotype data was collected from 5121 isolates of P. sojae, derived from 29 surveys conducted between 1990 and 2019 across the United States, Argentina, Canada, and China. This systematic review shows a loss of efficacy of specific Rps genes utilized for disease management and a significant increase in the pathotype diversity of isolates over time. This study finds that the most widely deployed Rps genes used to manage PRR globally, Rps1a, Rps1c and Rps1k, are no longer effective for PRR management in the United States, Argentina, and Canada. This systematic review emphasizes the need to widely introduce new sources of resistance to P. sojae, such as Rps3a, Rps6, or Rps11, into commercial cultivars to effectively manage PRR going forward.
AER Quines, INTA
Fil: McCoy, Austin. Michigan State University; Estados Unidos
Fil: Belange, Richard. Université Laval; Canadá
Fil: Bradley, Carl. University of Kentucky; Estados Unidos
Fil: Cerritos-Garcia, Daniel. University of Connecticut; Estados Unidos
Fil: Garnica, Vinicius. North Carolina State University; Estados Unidos
Fil: Giesler, Loren. University of Nebraska-Lincoln; Estados Unidos
Fil: Grijalba, Pablo. Universidad de Buenos Aires; Argentina
Fil: Guillin, Eduardo Alejandro. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria San Luis. Agencia de Extensión Rural Quines; Argentina
Fil: Henriquez, Maria. Agriculture and Agri-Food Canada ( Morden); Canadá
Fil: Kim, Yong Min. Agriculture and Agri-Food Canada ( Brandon); Canadá
Fil: Malvick, Dean. University of Minnesota; Estados Unidos
Fil: Matthiesen, Rashelle. Iowa State University; Estados Unidos
Fil: Mideros, Santiago. University of Illinois at Urbana-Champaign; Estados Unidos
Fil: Noel, Zachary. Auburn University; Estados Unidos
Fil: Robertson, Alison. Iowa State University; Estados Unidos
Fil: Roth, Mitchell. The Ohio State University-Wooster; Estados Unidos
Fil: Schmidt, Clarice. The Ohio State University-Wooster; Estados Unidos
Fil: Schmidt, Clarice. The Ohio State University-Wooster; Estados Unidos
Fil: Smith, Damon. University of Wisconsin-Madison; Estados Unidos
Fil: Sparks, Adam. University of Southern Queensland; Australia
Fil: Telenko, Darcy. Purdue University; Estados Unidos
Fil; Tremblay, Vanessa. Université Laval; Canadá
Fil: Wally, Owen. Agriculture and Agri-Food Canada ( Harrow); Canadá
Fil: Chilvers, Martin. Michigan State University; Estados Unidos
description Plant disease resistance genes are widely used in agriculture to reduce disease outbreaks and epidemics and ensure global food security. In soybean, Rps (Resistance to Phytophthora sojae) genes are used to manage Phytophthora sojae, a major oomycete pathogen that causes Phytophthora stem and root rot (PRR) worldwide. This study aims to identify temporal changes in P. sojae pathotype complexity, diversity, and Rps gene efficacy. Pathotype data was collected from 5121 isolates of P. sojae, derived from 29 surveys conducted between 1990 and 2019 across the United States, Argentina, Canada, and China. This systematic review shows a loss of efficacy of specific Rps genes utilized for disease management and a significant increase in the pathotype diversity of isolates over time. This study finds that the most widely deployed Rps genes used to manage PRR globally, Rps1a, Rps1c and Rps1k, are no longer effective for PRR management in the United States, Argentina, and Canada. This systematic review emphasizes the need to widely introduce new sources of resistance to P. sojae, such as Rps3a, Rps6, or Rps11, into commercial cultivars to effectively manage PRR going forward.
publishDate 2023
dc.date.none.fl_str_mv 2023-09-27
2024-03-19T10:24:39Z
2024-03-19T10:24:39Z
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/20.500.12123/17091
https://www.nature.com/articles/s41467-023-41321-7
2041-1723 (online)
https://doi.org/10.1038/s41467-023-41321-7
url http://hdl.handle.net/20.500.12123/17091
https://www.nature.com/articles/s41467-023-41321-7
https://doi.org/10.1038/s41467-023-41321-7
identifier_str_mv 2041-1723 (online)
dc.language.none.fl_str_mv eng
language eng
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
http://creativecommons.org/licenses/by-nc-sa/4.0/
Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)
eu_rights_str_mv openAccess
rights_invalid_str_mv http://creativecommons.org/licenses/by-nc-sa/4.0/
Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Springer Nature
publisher.none.fl_str_mv Springer Nature
dc.source.none.fl_str_mv Nature Communications 14 : 6043 (septiembre 2023)
reponame:INTA Digital (INTA)
instname:Instituto Nacional de Tecnología Agropecuaria
reponame_str INTA Digital (INTA)
collection INTA Digital (INTA)
instname_str Instituto Nacional de Tecnología Agropecuaria
repository.name.fl_str_mv INTA Digital (INTA) - Instituto Nacional de Tecnología Agropecuaria
repository.mail.fl_str_mv tripaldi.nicolas@inta.gob.ar
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