Preliminary genome-wide association study for skin traits in an Angora x creole backcross population

Autores
Cano Pereira, Ema Margarita; Debenedetti, Sebastián; Giovannini, Nicolas; Taddeo, Héctor Raúl; Poli, Mario Andres
Año de publicación
2018
Idioma
inglés
Tipo de recurso
documento de conferencia
Estado
versión publicada
Descripción
Angora goat produce mainly mohair fiber but the Creole goats have a double hair coat: cashmere, fine and short seasonal down coat and coarser and longer guard hair. Both, mohair and cashmere fiber are determined by two types of skin hair follicle, primary and secondary and several phenotypes can be drawn from them like S/P ratio. The aim of this study was to identify polymorphisms associated with skin traits in a backcross Angora x Creole goats (n=477) using a SNP-based GWAS analysis. Significant regions on CHIR 1, 2, 6, and X exhibit a maximum signal for seven SNP markers with a p-value from 8.16E-06 to 1.26E-04. These results indicate that may be several genes that could be involved in skin traits close to the most significant SNP markers in this backross Angora x Creole population.
Instituto de Genética
Fil: Cano Pereira, Ema Margarita. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Genética; Argentina
Fil: Debenedetti, Sebastián. Ministerio de Agricultura, Ganadería y Pesca de la Nación; Argentina
Fil: Giovannini, Nicolas. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Bariloche
Fil: Taddeo, Héctor Raúl. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Bariloche; Argentina
Fil: Poli, Mario Andres. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Genética; Argentina
Fuente
Proceedings of the 11th. World Congress on Genetics Applied to Livestock Production, Nueva Zelanda, 11 al 16 de febrero de 2018
Materia
Genomes
Angora Goat
Backcrossing
Single Nucleotide Polymorphism
Goats
Goatskin
Genomas
Cabra de Angora
Retrocruzamiento
Polimorfismo de un Solo Nucleótido
Caprinos
Piel de Cabra
Nivel de accesibilidad
acceso abierto
Condiciones de uso
http://creativecommons.org/licenses/by-nc-sa/4.0/
Repositorio
INTA Digital (INTA)
Institución
Instituto Nacional de Tecnología Agropecuaria
OAI Identificador
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spelling Preliminary genome-wide association study for skin traits in an Angora x creole backcross populationCano Pereira, Ema MargaritaDebenedetti, SebastiánGiovannini, NicolasTaddeo, Héctor RaúlPoli, Mario AndresGenomesAngora GoatBackcrossingSingle Nucleotide PolymorphismGoatsGoatskinGenomasCabra de AngoraRetrocruzamientoPolimorfismo de un Solo NucleótidoCaprinosPiel de CabraAngora goat produce mainly mohair fiber but the Creole goats have a double hair coat: cashmere, fine and short seasonal down coat and coarser and longer guard hair. Both, mohair and cashmere fiber are determined by two types of skin hair follicle, primary and secondary and several phenotypes can be drawn from them like S/P ratio. The aim of this study was to identify polymorphisms associated with skin traits in a backcross Angora x Creole goats (n=477) using a SNP-based GWAS analysis. Significant regions on CHIR 1, 2, 6, and X exhibit a maximum signal for seven SNP markers with a p-value from 8.16E-06 to 1.26E-04. These results indicate that may be several genes that could be involved in skin traits close to the most significant SNP markers in this backross Angora x Creole population.Instituto de GenéticaFil: Cano Pereira, Ema Margarita. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Genética; ArgentinaFil: Debenedetti, Sebastián. Ministerio de Agricultura, Ganadería y Pesca de la Nación; ArgentinaFil: Giovannini, Nicolas. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria BarilocheFil: Taddeo, Héctor Raúl. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Bariloche; ArgentinaFil: Poli, Mario Andres. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Genética; ArgentinaMasey University (Nueva Zelanda)2022-06-22T10:25:58Z2022-06-22T10:25:58Z2018-02info:eu-repo/semantics/conferenceObjectinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_5794info:ar-repo/semantics/documentoDeConferenciaapplication/pdfhttp://hdl.handle.net/20.500.12123/12134Proceedings of the 11th. World Congress on Genetics Applied to Livestock Production, Nueva Zelanda, 11 al 16 de febrero de 2018reponame:INTA Digital (INTA)instname:Instituto Nacional de Tecnología Agropecuariaenginfo:eu-repo/semantics/openAccesshttp://creativecommons.org/licenses/by-nc-sa/4.0/Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)2025-09-29T13:45:35Zoai:localhost:20.500.12123/12134instacron:INTAInstitucionalhttp://repositorio.inta.gob.ar/Organismo científico-tecnológicoNo correspondehttp://repositorio.inta.gob.ar/oai/requesttripaldi.nicolas@inta.gob.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:l2025-09-29 13:45:36.093INTA Digital (INTA) - Instituto Nacional de Tecnología Agropecuariafalse
dc.title.none.fl_str_mv Preliminary genome-wide association study for skin traits in an Angora x creole backcross population
title Preliminary genome-wide association study for skin traits in an Angora x creole backcross population
spellingShingle Preliminary genome-wide association study for skin traits in an Angora x creole backcross population
Cano Pereira, Ema Margarita
Genomes
Angora Goat
Backcrossing
Single Nucleotide Polymorphism
Goats
Goatskin
Genomas
Cabra de Angora
Retrocruzamiento
Polimorfismo de un Solo Nucleótido
Caprinos
Piel de Cabra
title_short Preliminary genome-wide association study for skin traits in an Angora x creole backcross population
title_full Preliminary genome-wide association study for skin traits in an Angora x creole backcross population
title_fullStr Preliminary genome-wide association study for skin traits in an Angora x creole backcross population
title_full_unstemmed Preliminary genome-wide association study for skin traits in an Angora x creole backcross population
title_sort Preliminary genome-wide association study for skin traits in an Angora x creole backcross population
dc.creator.none.fl_str_mv Cano Pereira, Ema Margarita
Debenedetti, Sebastián
Giovannini, Nicolas
Taddeo, Héctor Raúl
Poli, Mario Andres
author Cano Pereira, Ema Margarita
author_facet Cano Pereira, Ema Margarita
Debenedetti, Sebastián
Giovannini, Nicolas
Taddeo, Héctor Raúl
Poli, Mario Andres
author_role author
author2 Debenedetti, Sebastián
Giovannini, Nicolas
Taddeo, Héctor Raúl
Poli, Mario Andres
author2_role author
author
author
author
dc.subject.none.fl_str_mv Genomes
Angora Goat
Backcrossing
Single Nucleotide Polymorphism
Goats
Goatskin
Genomas
Cabra de Angora
Retrocruzamiento
Polimorfismo de un Solo Nucleótido
Caprinos
Piel de Cabra
topic Genomes
Angora Goat
Backcrossing
Single Nucleotide Polymorphism
Goats
Goatskin
Genomas
Cabra de Angora
Retrocruzamiento
Polimorfismo de un Solo Nucleótido
Caprinos
Piel de Cabra
dc.description.none.fl_txt_mv Angora goat produce mainly mohair fiber but the Creole goats have a double hair coat: cashmere, fine and short seasonal down coat and coarser and longer guard hair. Both, mohair and cashmere fiber are determined by two types of skin hair follicle, primary and secondary and several phenotypes can be drawn from them like S/P ratio. The aim of this study was to identify polymorphisms associated with skin traits in a backcross Angora x Creole goats (n=477) using a SNP-based GWAS analysis. Significant regions on CHIR 1, 2, 6, and X exhibit a maximum signal for seven SNP markers with a p-value from 8.16E-06 to 1.26E-04. These results indicate that may be several genes that could be involved in skin traits close to the most significant SNP markers in this backross Angora x Creole population.
Instituto de Genética
Fil: Cano Pereira, Ema Margarita. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Genética; Argentina
Fil: Debenedetti, Sebastián. Ministerio de Agricultura, Ganadería y Pesca de la Nación; Argentina
Fil: Giovannini, Nicolas. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Bariloche
Fil: Taddeo, Héctor Raúl. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Bariloche; Argentina
Fil: Poli, Mario Andres. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Genética; Argentina
description Angora goat produce mainly mohair fiber but the Creole goats have a double hair coat: cashmere, fine and short seasonal down coat and coarser and longer guard hair. Both, mohair and cashmere fiber are determined by two types of skin hair follicle, primary and secondary and several phenotypes can be drawn from them like S/P ratio. The aim of this study was to identify polymorphisms associated with skin traits in a backcross Angora x Creole goats (n=477) using a SNP-based GWAS analysis. Significant regions on CHIR 1, 2, 6, and X exhibit a maximum signal for seven SNP markers with a p-value from 8.16E-06 to 1.26E-04. These results indicate that may be several genes that could be involved in skin traits close to the most significant SNP markers in this backross Angora x Creole population.
publishDate 2018
dc.date.none.fl_str_mv 2018-02
2022-06-22T10:25:58Z
2022-06-22T10:25:58Z
dc.type.none.fl_str_mv info:eu-repo/semantics/conferenceObject
info:eu-repo/semantics/publishedVersion
http://purl.org/coar/resource_type/c_5794
info:ar-repo/semantics/documentoDeConferencia
format conferenceObject
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/20.500.12123/12134
url http://hdl.handle.net/20.500.12123/12134
dc.language.none.fl_str_mv eng
language eng
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
http://creativecommons.org/licenses/by-nc-sa/4.0/
Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)
eu_rights_str_mv openAccess
rights_invalid_str_mv http://creativecommons.org/licenses/by-nc-sa/4.0/
Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Masey University (Nueva Zelanda)
publisher.none.fl_str_mv Masey University (Nueva Zelanda)
dc.source.none.fl_str_mv Proceedings of the 11th. World Congress on Genetics Applied to Livestock Production, Nueva Zelanda, 11 al 16 de febrero de 2018
reponame:INTA Digital (INTA)
instname:Instituto Nacional de Tecnología Agropecuaria
reponame_str INTA Digital (INTA)
collection INTA Digital (INTA)
instname_str Instituto Nacional de Tecnología Agropecuaria
repository.name.fl_str_mv INTA Digital (INTA) - Instituto Nacional de Tecnología Agropecuaria
repository.mail.fl_str_mv tripaldi.nicolas@inta.gob.ar
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score 12.559606

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