Chromosome painting in Glyphorynchus spirurus (Vieillot, 1819) detects a new fission in Passeriformes

Autores
Ribas, Talita Fernanda Augusto; Nagamachi, Cleusa Yoshiko; Aleixo, Alexandre; Pinheiro, Melquizedec Luiz Silva; O'Brien, Patricia Caroline Mary; Ferguson Smith, Malcolm Andrew; Yang, Fengtang; Suarez, Pablo; Pieczarka, Julio Cesar
Año de publicación
2018
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
Glyphorynchus spirurus (GSP), also called the Wedge-billed Woodcreeper (Furnariidae) has an extensive distribution in the Americas, including the Atlantic coast of Brazil. Nevertheless, there is no information about its karyotype or genome organization. To contribute to the knowledge of chromosomal evolution in Passeriformes we analysed the karyotype of Glyphorynchus spirurus by classic and molecular cytogenetics methods. We show that Glyphorynchus spirurus has a 2n = 80 karyotype with a fundamental number (FN) of 84, similar to the avian putative ancestral karyotype (PAK). Glyphorynchus spirurus pair 1 was heteromorphic in the Tapajós population whereby the short arms varied in sizes, possibly due to a pericentric inversion, as described in other Furnariidae birds. FISH with the Histone H5 probe revealed a signal in the pericentromeric region of G. spirurus chromosome 5 and rDNA 18S showed interstitial signal in GSP-1. Chromosome painting with Gallus gallus (GGA) macrochromosomes 1–9 probes showed disruption of chromosome syntenies of GGA-1, 2 and 4 by fission in Glyphorynchus spirurus. Our results confirm that the GGA1 centric fission is a synapomorphic character for the phylogenetic branch composed of Strigiformes, Passeriformes, Columbiformes and Falconiformes. On the other hand, the GGA-2 fission is reported here for the first time in Passeriformes. Chromosome painting with BOE whole chromosome probes confirmed these rearrangements in Glyphorynchus spirurus revealed by Gallus gallus 1–9 probes, in addition to enabling the establishment of genome-wide homology map.
Fil: Ribas, Talita Fernanda Augusto. Universidade Federal do Pará; Brasil
Fil: Nagamachi, Cleusa Yoshiko. Universidade Federal do Pará; Brasil. Conselho Nacional de Desenvolvimiento Científico y Tecnológico; Brasil
Fil: Aleixo, Alexandre. Museu Paraense Emílio Goeldi; Brasil
Fil: Pinheiro, Melquizedec Luiz Silva. Universidade Federal do Pará; Brasil
Fil: O'Brien, Patricia Caroline Mary. University of Cambridge; Reino Unido
Fil: Ferguson Smith, Malcolm Andrew. University of Cambridge; Reino Unido
Fil: Yang, Fengtang. Wellcome Sanger Institute; Reino Unido
Fil: Suarez, Pablo. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Nordeste. Instituto de Biología Subtropical. Instituto de Biología Subtropical - Nodo Puerto Iguazú | Universidad Nacional de Misiones. Instituto de Biología Subtropical. Instituto de Biología Subtropical - Nodo Puerto Iguazú; Argentina
Fil: Pieczarka, Julio Cesar. Universidade Federal do Pará; Brasil. Conselho Nacional de Desenvolvimiento Científico y Tecnológico; Brasil
Materia
WEDGE-BILLED WOODCREEPER
CHROMOSOME EVOLUTION
AMAZON
FURNARIIDAE
Nivel de accesibilidad
acceso abierto
Condiciones de uso
https://creativecommons.org/licenses/by/2.5/ar/
Repositorio
CONICET Digital (CONICET)
Institución
Consejo Nacional de Investigaciones Científicas y Técnicas
OAI Identificador
oai:ri.conicet.gov.ar:11336/86838
Acceder
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oai_identifier_str oai:ri.conicet.gov.ar:11336/86838
network_acronym_str CONICETDig
repository_id_str 3498
network_name_str CONICET Digital (CONICET)
spelling Chromosome painting in Glyphorynchus spirurus (Vieillot, 1819) detects a new fission in PasseriformesRibas, Talita Fernanda AugustoNagamachi, Cleusa YoshikoAleixo, AlexandrePinheiro, Melquizedec Luiz SilvaO'Brien, Patricia Caroline MaryFerguson Smith, Malcolm AndrewYang, FengtangSuarez, PabloPieczarka, Julio CesarWEDGE-BILLED WOODCREEPERCHROMOSOME EVOLUTIONAMAZONFURNARIIDAEhttps://purl.org/becyt/ford/1.6https://purl.org/becyt/ford/1Glyphorynchus spirurus (GSP), also called the Wedge-billed Woodcreeper (Furnariidae) has an extensive distribution in the Americas, including the Atlantic coast of Brazil. Nevertheless, there is no information about its karyotype or genome organization. To contribute to the knowledge of chromosomal evolution in Passeriformes we analysed the karyotype of Glyphorynchus spirurus by classic and molecular cytogenetics methods. We show that Glyphorynchus spirurus has a 2n = 80 karyotype with a fundamental number (FN) of 84, similar to the avian putative ancestral karyotype (PAK). Glyphorynchus spirurus pair 1 was heteromorphic in the Tapajós population whereby the short arms varied in sizes, possibly due to a pericentric inversion, as described in other Furnariidae birds. FISH with the Histone H5 probe revealed a signal in the pericentromeric region of G. spirurus chromosome 5 and rDNA 18S showed interstitial signal in GSP-1. Chromosome painting with Gallus gallus (GGA) macrochromosomes 1–9 probes showed disruption of chromosome syntenies of GGA-1, 2 and 4 by fission in Glyphorynchus spirurus. Our results confirm that the GGA1 centric fission is a synapomorphic character for the phylogenetic branch composed of Strigiformes, Passeriformes, Columbiformes and Falconiformes. On the other hand, the GGA-2 fission is reported here for the first time in Passeriformes. Chromosome painting with BOE whole chromosome probes confirmed these rearrangements in Glyphorynchus spirurus revealed by Gallus gallus 1–9 probes, in addition to enabling the establishment of genome-wide homology map.Fil: Ribas, Talita Fernanda Augusto. Universidade Federal do Pará; BrasilFil: Nagamachi, Cleusa Yoshiko. Universidade Federal do Pará; Brasil. Conselho Nacional de Desenvolvimiento Científico y Tecnológico; BrasilFil: Aleixo, Alexandre. Museu Paraense Emílio Goeldi; BrasilFil: Pinheiro, Melquizedec Luiz Silva. Universidade Federal do Pará; BrasilFil: O'Brien, Patricia Caroline Mary. University of Cambridge; Reino UnidoFil: Ferguson Smith, Malcolm Andrew. University of Cambridge; Reino UnidoFil: Yang, Fengtang. Wellcome Sanger Institute; Reino UnidoFil: Suarez, Pablo. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Nordeste. Instituto de Biología Subtropical. Instituto de Biología Subtropical - Nodo Puerto Iguazú | Universidad Nacional de Misiones. Instituto de Biología Subtropical. Instituto de Biología Subtropical - Nodo Puerto Iguazú; ArgentinaFil: Pieczarka, Julio Cesar. Universidade Federal do Pará; Brasil. Conselho Nacional de Desenvolvimiento Científico y Tecnológico; BrasilPublic Library of Science2018-08info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/86838Ribas, Talita Fernanda Augusto; Nagamachi, Cleusa Yoshiko; Aleixo, Alexandre; Pinheiro, Melquizedec Luiz Silva; O'Brien, Patricia Caroline Mary; et al.; Chromosome painting in Glyphorynchus spirurus (Vieillot, 1819) detects a new fission in Passeriformes; Public Library of Science; Plos One; 13; 8; 8-2018; 1-13; e02020401932-6203CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/url/http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0202040info:eu-repo/semantics/altIdentifier/doi/10.1371/journal.pone.0202040info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-11-26T08:52:00Zoai:ri.conicet.gov.ar:11336/86838instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-11-26 08:52:01.022CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse
dc.title.none.fl_str_mv Chromosome painting in Glyphorynchus spirurus (Vieillot, 1819) detects a new fission in Passeriformes
title Chromosome painting in Glyphorynchus spirurus (Vieillot, 1819) detects a new fission in Passeriformes
spellingShingle Chromosome painting in Glyphorynchus spirurus (Vieillot, 1819) detects a new fission in Passeriformes
Ribas, Talita Fernanda Augusto
WEDGE-BILLED WOODCREEPER
CHROMOSOME EVOLUTION
AMAZON
FURNARIIDAE
title_short Chromosome painting in Glyphorynchus spirurus (Vieillot, 1819) detects a new fission in Passeriformes
title_full Chromosome painting in Glyphorynchus spirurus (Vieillot, 1819) detects a new fission in Passeriformes
title_fullStr Chromosome painting in Glyphorynchus spirurus (Vieillot, 1819) detects a new fission in Passeriformes
title_full_unstemmed Chromosome painting in Glyphorynchus spirurus (Vieillot, 1819) detects a new fission in Passeriformes
title_sort Chromosome painting in Glyphorynchus spirurus (Vieillot, 1819) detects a new fission in Passeriformes
dc.creator.none.fl_str_mv Ribas, Talita Fernanda Augusto
Nagamachi, Cleusa Yoshiko
Aleixo, Alexandre
Pinheiro, Melquizedec Luiz Silva
O'Brien, Patricia Caroline Mary
Ferguson Smith, Malcolm Andrew
Yang, Fengtang
Suarez, Pablo
Pieczarka, Julio Cesar
author Ribas, Talita Fernanda Augusto
author_facet Ribas, Talita Fernanda Augusto
Nagamachi, Cleusa Yoshiko
Aleixo, Alexandre
Pinheiro, Melquizedec Luiz Silva
O'Brien, Patricia Caroline Mary
Ferguson Smith, Malcolm Andrew
Yang, Fengtang
Suarez, Pablo
Pieczarka, Julio Cesar
author_role author
author2 Nagamachi, Cleusa Yoshiko
Aleixo, Alexandre
Pinheiro, Melquizedec Luiz Silva
O'Brien, Patricia Caroline Mary
Ferguson Smith, Malcolm Andrew
Yang, Fengtang
Suarez, Pablo
Pieczarka, Julio Cesar
author2_role author
author
author
author
author
author
author
author
dc.subject.none.fl_str_mv WEDGE-BILLED WOODCREEPER
CHROMOSOME EVOLUTION
AMAZON
FURNARIIDAE
topic WEDGE-BILLED WOODCREEPER
CHROMOSOME EVOLUTION
AMAZON
FURNARIIDAE
purl_subject.fl_str_mv https://purl.org/becyt/ford/1.6
https://purl.org/becyt/ford/1
dc.description.none.fl_txt_mv Glyphorynchus spirurus (GSP), also called the Wedge-billed Woodcreeper (Furnariidae) has an extensive distribution in the Americas, including the Atlantic coast of Brazil. Nevertheless, there is no information about its karyotype or genome organization. To contribute to the knowledge of chromosomal evolution in Passeriformes we analysed the karyotype of Glyphorynchus spirurus by classic and molecular cytogenetics methods. We show that Glyphorynchus spirurus has a 2n = 80 karyotype with a fundamental number (FN) of 84, similar to the avian putative ancestral karyotype (PAK). Glyphorynchus spirurus pair 1 was heteromorphic in the Tapajós population whereby the short arms varied in sizes, possibly due to a pericentric inversion, as described in other Furnariidae birds. FISH with the Histone H5 probe revealed a signal in the pericentromeric region of G. spirurus chromosome 5 and rDNA 18S showed interstitial signal in GSP-1. Chromosome painting with Gallus gallus (GGA) macrochromosomes 1–9 probes showed disruption of chromosome syntenies of GGA-1, 2 and 4 by fission in Glyphorynchus spirurus. Our results confirm that the GGA1 centric fission is a synapomorphic character for the phylogenetic branch composed of Strigiformes, Passeriformes, Columbiformes and Falconiformes. On the other hand, the GGA-2 fission is reported here for the first time in Passeriformes. Chromosome painting with BOE whole chromosome probes confirmed these rearrangements in Glyphorynchus spirurus revealed by Gallus gallus 1–9 probes, in addition to enabling the establishment of genome-wide homology map.
Fil: Ribas, Talita Fernanda Augusto. Universidade Federal do Pará; Brasil
Fil: Nagamachi, Cleusa Yoshiko. Universidade Federal do Pará; Brasil. Conselho Nacional de Desenvolvimiento Científico y Tecnológico; Brasil
Fil: Aleixo, Alexandre. Museu Paraense Emílio Goeldi; Brasil
Fil: Pinheiro, Melquizedec Luiz Silva. Universidade Federal do Pará; Brasil
Fil: O'Brien, Patricia Caroline Mary. University of Cambridge; Reino Unido
Fil: Ferguson Smith, Malcolm Andrew. University of Cambridge; Reino Unido
Fil: Yang, Fengtang. Wellcome Sanger Institute; Reino Unido
Fil: Suarez, Pablo. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Nordeste. Instituto de Biología Subtropical. Instituto de Biología Subtropical - Nodo Puerto Iguazú | Universidad Nacional de Misiones. Instituto de Biología Subtropical. Instituto de Biología Subtropical - Nodo Puerto Iguazú; Argentina
Fil: Pieczarka, Julio Cesar. Universidade Federal do Pará; Brasil. Conselho Nacional de Desenvolvimiento Científico y Tecnológico; Brasil
description Glyphorynchus spirurus (GSP), also called the Wedge-billed Woodcreeper (Furnariidae) has an extensive distribution in the Americas, including the Atlantic coast of Brazil. Nevertheless, there is no information about its karyotype or genome organization. To contribute to the knowledge of chromosomal evolution in Passeriformes we analysed the karyotype of Glyphorynchus spirurus by classic and molecular cytogenetics methods. We show that Glyphorynchus spirurus has a 2n = 80 karyotype with a fundamental number (FN) of 84, similar to the avian putative ancestral karyotype (PAK). Glyphorynchus spirurus pair 1 was heteromorphic in the Tapajós population whereby the short arms varied in sizes, possibly due to a pericentric inversion, as described in other Furnariidae birds. FISH with the Histone H5 probe revealed a signal in the pericentromeric region of G. spirurus chromosome 5 and rDNA 18S showed interstitial signal in GSP-1. Chromosome painting with Gallus gallus (GGA) macrochromosomes 1–9 probes showed disruption of chromosome syntenies of GGA-1, 2 and 4 by fission in Glyphorynchus spirurus. Our results confirm that the GGA1 centric fission is a synapomorphic character for the phylogenetic branch composed of Strigiformes, Passeriformes, Columbiformes and Falconiformes. On the other hand, the GGA-2 fission is reported here for the first time in Passeriformes. Chromosome painting with BOE whole chromosome probes confirmed these rearrangements in Glyphorynchus spirurus revealed by Gallus gallus 1–9 probes, in addition to enabling the establishment of genome-wide homology map.
publishDate 2018
dc.date.none.fl_str_mv 2018-08
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/11336/86838
Ribas, Talita Fernanda Augusto; Nagamachi, Cleusa Yoshiko; Aleixo, Alexandre; Pinheiro, Melquizedec Luiz Silva; O'Brien, Patricia Caroline Mary; et al.; Chromosome painting in Glyphorynchus spirurus (Vieillot, 1819) detects a new fission in Passeriformes; Public Library of Science; Plos One; 13; 8; 8-2018; 1-13; e0202040
1932-6203
CONICET Digital
CONICET
url http://hdl.handle.net/11336/86838
identifier_str_mv Ribas, Talita Fernanda Augusto; Nagamachi, Cleusa Yoshiko; Aleixo, Alexandre; Pinheiro, Melquizedec Luiz Silva; O'Brien, Patricia Caroline Mary; et al.; Chromosome painting in Glyphorynchus spirurus (Vieillot, 1819) detects a new fission in Passeriformes; Public Library of Science; Plos One; 13; 8; 8-2018; 1-13; e0202040
1932-6203
CONICET Digital
CONICET
dc.language.none.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv info:eu-repo/semantics/altIdentifier/url/http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0202040
info:eu-repo/semantics/altIdentifier/doi/10.1371/journal.pone.0202040
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
https://creativecommons.org/licenses/by/2.5/ar/
eu_rights_str_mv openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by/2.5/ar/
dc.format.none.fl_str_mv application/pdf
application/pdf
dc.publisher.none.fl_str_mv Public Library of Science
publisher.none.fl_str_mv Public Library of Science
dc.source.none.fl_str_mv reponame:CONICET Digital (CONICET)
instname:Consejo Nacional de Investigaciones Científicas y Técnicas
reponame_str CONICET Digital (CONICET)
collection CONICET Digital (CONICET)
instname_str Consejo Nacional de Investigaciones Científicas y Técnicas
repository.name.fl_str_mv CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas
repository.mail.fl_str_mv dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar
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score 13.011256

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