Contrasting Patterns of Nuclear and mtDNA Diversity in Native American Populations

Autores
Yang, Ning Ning; Mazières, Stephane; Bravi, Claudio Marcelo; Ray, Nicolas; Wang, Sijia; Burley, Mari-Wyn; Bedoya Berrío, Gabriel; Rojas, Winston; Parra, María Verónica; Molina, Julio A.; Gallo, Carla; Poletti, Giovanni; Hill, Kim; Hurtado, Ana M.; Petzl Erler, Maria L.; Tsuneto, Luiza T.; Klitz, William; Barrantes, Ramiro; Llop, Elena; Rothhammer, Francisco; Labuda, Damian; Salzano, Francisco M.; Bortolini, María Cátira; Excoffier, Laurent; Dugoujon, Jean Michel; Ruiz-Linares, Andres
Año de publicación
2010
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
We report an integrated analysis of nuclear (autosomal, X- and Y-chromosome) short tandem repeat (STR) data and mtDNA D-loop sequences obtained in the same set of 22 Native populations from across the Americas. A north to south gradient of decreasing population diversity was observed, in agreement with a settlement of the Americas from the extreme northwest of the continent. This correlation is stronger with "least cost distances," which consider the coasts as facilitators of migration. Continent-wide estimates of population structure are highest for the Y-chromosome and lowest for the autosomes, consistent with the effective size of the different marker systems examined. Population differentiation is highest in East South America and lowest in Meso America and the Andean region. Regional analyses suggest a deviation from mutation-drift equilibrium consistent with population expansion in Meso America and the Andes and population contraction in Northwest and East South America. These data hint at an early divergence of Andean and non-Andean South Americans and at a contrasting demographic history for populations from these regions.
Fil: Yang, Ning Ning. Colegio Universitario de Londres; Reino Unido
Fil: Mazières, Stephane. Centre National de la Recherche Scientifique; Francia. Université Paul Sabatier; Francia
Fil: Bravi, Claudio Marcelo. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - La Plata. Instituto Multidisciplinario de Biología Celular. Provincia de Buenos Aires. Gobernación. Comisión de Investigaciones Científicas. Instituto Multidisciplinario de Biología Celular. Universidad Nacional de La Plata. Instituto Multidisciplinario de Biología Celular; Argentina
Fil: Ray, Nicolas. Universidad de Ginebra; Suiza
Fil: Wang, Sijia. Harvard University; Estados Unidos
Fil: Burley, Mari-Wyn. Colegio Universitario de Londres; Reino Unido
Fil: Bedoya Berrío, Gabriel. Universidad de Antioquia; Colombia
Fil: Rojas, Winston. Universidad de Antioquia; Colombia
Fil: Parra, María Verónica. Universidad de Antioquia; Colombia
Fil: Molina, Julio A.. Centro de Investigaciones Biomédicas de Guatemala; Guatemala
Fil: Gallo, Carla. Universidad Peruana Cayetano Heredia; Perú
Fil: Poletti, Giovanni. Universidad Peruana Cayetano Heredia; Perú
Fil: Hill, Kim. Arizona State University; Estados Unidos
Fil: Hurtado, Ana M.. Arizona State University; Estados Unidos
Fil: Petzl Erler, Maria L.. Universidade Federal do Paraná; Brasil
Fil: Tsuneto, Luiza T.. Universidade Federal do Paraná; Brasil
Fil: Klitz, William. University of California at Berkeley; Estados Unidos. Public Health Institute; Estados Unidos
Fil: Barrantes, Ramiro. Universidad de Costa Rica; Costa Rica
Fil: Llop, Elena. Universidad de Tarapacá; Chile. Universidad de Chile; Chile
Fil: Rothhammer, Francisco. Universidad de Chile; Chile. Universidad de Tarapacá; Chile
Fil: Labuda, Damian. University of Montreal; Canadá
Fil: Salzano, Francisco M.. Universidade Federal do Rio Grande do Sul; Brasil
Fil: Bortolini, María Cátira. Universidade Federal do Rio Grande do Sul; Brasil
Fil: Excoffier, Laurent. Swiss Institute of Bioinformatics; Suiza. University of Bern; Suiza
Fil: Dugoujon, Jean Michel. Université Paul Sabatier; Francia. Centre National de la Recherche Scientifique; Francia
Fil: Ruiz-Linares, Andres. Colegio Universitario de Londres; Reino Unido
Materia
AMERIINDIANS
MTDNA
STRS
X-CHROMOSOME
Y-CHROMOSOME
Nivel de accesibilidad
acceso abierto
Condiciones de uso
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
Repositorio
CONICET Digital (CONICET)
Institución
Consejo Nacional de Investigaciones Científicas y Técnicas
OAI Identificador
oai:ri.conicet.gov.ar:11336/95481

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network_name_str CONICET Digital (CONICET)
spelling Contrasting Patterns of Nuclear and mtDNA Diversity in Native American PopulationsYang, Ning NingMazières, StephaneBravi, Claudio MarceloRay, NicolasWang, SijiaBurley, Mari-WynBedoya Berrío, GabrielRojas, WinstonParra, María VerónicaMolina, Julio A.Gallo, CarlaPoletti, GiovanniHill, KimHurtado, Ana M.Petzl Erler, Maria L.Tsuneto, Luiza T.Klitz, WilliamBarrantes, RamiroLlop, ElenaRothhammer, FranciscoLabuda, DamianSalzano, Francisco M.Bortolini, María CátiraExcoffier, LaurentDugoujon, Jean MichelRuiz-Linares, AndresAMERIINDIANSMTDNASTRSX-CHROMOSOMEY-CHROMOSOMEhttps://purl.org/becyt/ford/1.6https://purl.org/becyt/ford/1We report an integrated analysis of nuclear (autosomal, X- and Y-chromosome) short tandem repeat (STR) data and mtDNA D-loop sequences obtained in the same set of 22 Native populations from across the Americas. A north to south gradient of decreasing population diversity was observed, in agreement with a settlement of the Americas from the extreme northwest of the continent. This correlation is stronger with "least cost distances," which consider the coasts as facilitators of migration. Continent-wide estimates of population structure are highest for the Y-chromosome and lowest for the autosomes, consistent with the effective size of the different marker systems examined. Population differentiation is highest in East South America and lowest in Meso America and the Andean region. Regional analyses suggest a deviation from mutation-drift equilibrium consistent with population expansion in Meso America and the Andes and population contraction in Northwest and East South America. These data hint at an early divergence of Andean and non-Andean South Americans and at a contrasting demographic history for populations from these regions.Fil: Yang, Ning Ning. Colegio Universitario de Londres; Reino UnidoFil: Mazières, Stephane. Centre National de la Recherche Scientifique; Francia. Université Paul Sabatier; FranciaFil: Bravi, Claudio Marcelo. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - La Plata. Instituto Multidisciplinario de Biología Celular. Provincia de Buenos Aires. Gobernación. Comisión de Investigaciones Científicas. Instituto Multidisciplinario de Biología Celular. Universidad Nacional de La Plata. Instituto Multidisciplinario de Biología Celular; ArgentinaFil: Ray, Nicolas. Universidad de Ginebra; SuizaFil: Wang, Sijia. Harvard University; Estados UnidosFil: Burley, Mari-Wyn. Colegio Universitario de Londres; Reino UnidoFil: Bedoya Berrío, Gabriel. Universidad de Antioquia; ColombiaFil: Rojas, Winston. Universidad de Antioquia; ColombiaFil: Parra, María Verónica. Universidad de Antioquia; ColombiaFil: Molina, Julio A.. Centro de Investigaciones Biomédicas de Guatemala; GuatemalaFil: Gallo, Carla. Universidad Peruana Cayetano Heredia; PerúFil: Poletti, Giovanni. Universidad Peruana Cayetano Heredia; PerúFil: Hill, Kim. Arizona State University; Estados UnidosFil: Hurtado, Ana M.. Arizona State University; Estados UnidosFil: Petzl Erler, Maria L.. Universidade Federal do Paraná; BrasilFil: Tsuneto, Luiza T.. Universidade Federal do Paraná; BrasilFil: Klitz, William. University of California at Berkeley; Estados Unidos. Public Health Institute; Estados UnidosFil: Barrantes, Ramiro. Universidad de Costa Rica; Costa RicaFil: Llop, Elena. Universidad de Tarapacá; Chile. Universidad de Chile; ChileFil: Rothhammer, Francisco. Universidad de Chile; Chile. Universidad de Tarapacá; ChileFil: Labuda, Damian. University of Montreal; CanadáFil: Salzano, Francisco M.. Universidade Federal do Rio Grande do Sul; BrasilFil: Bortolini, María Cátira. Universidade Federal do Rio Grande do Sul; BrasilFil: Excoffier, Laurent. Swiss Institute of Bioinformatics; Suiza. University of Bern; SuizaFil: Dugoujon, Jean Michel. Université Paul Sabatier; Francia. Centre National de la Recherche Scientifique; FranciaFil: Ruiz-Linares, Andres. Colegio Universitario de Londres; Reino UnidoWiley Blackwell Publishing, Inc2010-11info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/95481Yang, Ning Ning; Mazières, Stephane; Bravi, Claudio Marcelo; Ray, Nicolas; Wang, Sijia; et al.; Contrasting Patterns of Nuclear and mtDNA Diversity in Native American Populations; Wiley Blackwell Publishing, Inc; Annals Of Human Genetics; 74; 6; 11-2010; 525-5380003-4800CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/url/https://onlinelibrary.wiley.com/doi/abs/10.1111/j.1469-1809.2010.00608.xinfo:eu-repo/semantics/altIdentifier/doi/10.1111/j.1469-1809.2010.00608.xinfo:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-sa/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-10-15T15:27:05Zoai:ri.conicet.gov.ar:11336/95481instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-10-15 15:27:05.498CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse
dc.title.none.fl_str_mv Contrasting Patterns of Nuclear and mtDNA Diversity in Native American Populations
title Contrasting Patterns of Nuclear and mtDNA Diversity in Native American Populations
spellingShingle Contrasting Patterns of Nuclear and mtDNA Diversity in Native American Populations
Yang, Ning Ning
AMERIINDIANS
MTDNA
STRS
X-CHROMOSOME
Y-CHROMOSOME
title_short Contrasting Patterns of Nuclear and mtDNA Diversity in Native American Populations
title_full Contrasting Patterns of Nuclear and mtDNA Diversity in Native American Populations
title_fullStr Contrasting Patterns of Nuclear and mtDNA Diversity in Native American Populations
title_full_unstemmed Contrasting Patterns of Nuclear and mtDNA Diversity in Native American Populations
title_sort Contrasting Patterns of Nuclear and mtDNA Diversity in Native American Populations
dc.creator.none.fl_str_mv Yang, Ning Ning
Mazières, Stephane
Bravi, Claudio Marcelo
Ray, Nicolas
Wang, Sijia
Burley, Mari-Wyn
Bedoya Berrío, Gabriel
Rojas, Winston
Parra, María Verónica
Molina, Julio A.
Gallo, Carla
Poletti, Giovanni
Hill, Kim
Hurtado, Ana M.
Petzl Erler, Maria L.
Tsuneto, Luiza T.
Klitz, William
Barrantes, Ramiro
Llop, Elena
Rothhammer, Francisco
Labuda, Damian
Salzano, Francisco M.
Bortolini, María Cátira
Excoffier, Laurent
Dugoujon, Jean Michel
Ruiz-Linares, Andres
author Yang, Ning Ning
author_facet Yang, Ning Ning
Mazières, Stephane
Bravi, Claudio Marcelo
Ray, Nicolas
Wang, Sijia
Burley, Mari-Wyn
Bedoya Berrío, Gabriel
Rojas, Winston
Parra, María Verónica
Molina, Julio A.
Gallo, Carla
Poletti, Giovanni
Hill, Kim
Hurtado, Ana M.
Petzl Erler, Maria L.
Tsuneto, Luiza T.
Klitz, William
Barrantes, Ramiro
Llop, Elena
Rothhammer, Francisco
Labuda, Damian
Salzano, Francisco M.
Bortolini, María Cátira
Excoffier, Laurent
Dugoujon, Jean Michel
Ruiz-Linares, Andres
author_role author
author2 Mazières, Stephane
Bravi, Claudio Marcelo
Ray, Nicolas
Wang, Sijia
Burley, Mari-Wyn
Bedoya Berrío, Gabriel
Rojas, Winston
Parra, María Verónica
Molina, Julio A.
Gallo, Carla
Poletti, Giovanni
Hill, Kim
Hurtado, Ana M.
Petzl Erler, Maria L.
Tsuneto, Luiza T.
Klitz, William
Barrantes, Ramiro
Llop, Elena
Rothhammer, Francisco
Labuda, Damian
Salzano, Francisco M.
Bortolini, María Cátira
Excoffier, Laurent
Dugoujon, Jean Michel
Ruiz-Linares, Andres
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.subject.none.fl_str_mv AMERIINDIANS
MTDNA
STRS
X-CHROMOSOME
Y-CHROMOSOME
topic AMERIINDIANS
MTDNA
STRS
X-CHROMOSOME
Y-CHROMOSOME
purl_subject.fl_str_mv https://purl.org/becyt/ford/1.6
https://purl.org/becyt/ford/1
dc.description.none.fl_txt_mv We report an integrated analysis of nuclear (autosomal, X- and Y-chromosome) short tandem repeat (STR) data and mtDNA D-loop sequences obtained in the same set of 22 Native populations from across the Americas. A north to south gradient of decreasing population diversity was observed, in agreement with a settlement of the Americas from the extreme northwest of the continent. This correlation is stronger with "least cost distances," which consider the coasts as facilitators of migration. Continent-wide estimates of population structure are highest for the Y-chromosome and lowest for the autosomes, consistent with the effective size of the different marker systems examined. Population differentiation is highest in East South America and lowest in Meso America and the Andean region. Regional analyses suggest a deviation from mutation-drift equilibrium consistent with population expansion in Meso America and the Andes and population contraction in Northwest and East South America. These data hint at an early divergence of Andean and non-Andean South Americans and at a contrasting demographic history for populations from these regions.
Fil: Yang, Ning Ning. Colegio Universitario de Londres; Reino Unido
Fil: Mazières, Stephane. Centre National de la Recherche Scientifique; Francia. Université Paul Sabatier; Francia
Fil: Bravi, Claudio Marcelo. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - La Plata. Instituto Multidisciplinario de Biología Celular. Provincia de Buenos Aires. Gobernación. Comisión de Investigaciones Científicas. Instituto Multidisciplinario de Biología Celular. Universidad Nacional de La Plata. Instituto Multidisciplinario de Biología Celular; Argentina
Fil: Ray, Nicolas. Universidad de Ginebra; Suiza
Fil: Wang, Sijia. Harvard University; Estados Unidos
Fil: Burley, Mari-Wyn. Colegio Universitario de Londres; Reino Unido
Fil: Bedoya Berrío, Gabriel. Universidad de Antioquia; Colombia
Fil: Rojas, Winston. Universidad de Antioquia; Colombia
Fil: Parra, María Verónica. Universidad de Antioquia; Colombia
Fil: Molina, Julio A.. Centro de Investigaciones Biomédicas de Guatemala; Guatemala
Fil: Gallo, Carla. Universidad Peruana Cayetano Heredia; Perú
Fil: Poletti, Giovanni. Universidad Peruana Cayetano Heredia; Perú
Fil: Hill, Kim. Arizona State University; Estados Unidos
Fil: Hurtado, Ana M.. Arizona State University; Estados Unidos
Fil: Petzl Erler, Maria L.. Universidade Federal do Paraná; Brasil
Fil: Tsuneto, Luiza T.. Universidade Federal do Paraná; Brasil
Fil: Klitz, William. University of California at Berkeley; Estados Unidos. Public Health Institute; Estados Unidos
Fil: Barrantes, Ramiro. Universidad de Costa Rica; Costa Rica
Fil: Llop, Elena. Universidad de Tarapacá; Chile. Universidad de Chile; Chile
Fil: Rothhammer, Francisco. Universidad de Chile; Chile. Universidad de Tarapacá; Chile
Fil: Labuda, Damian. University of Montreal; Canadá
Fil: Salzano, Francisco M.. Universidade Federal do Rio Grande do Sul; Brasil
Fil: Bortolini, María Cátira. Universidade Federal do Rio Grande do Sul; Brasil
Fil: Excoffier, Laurent. Swiss Institute of Bioinformatics; Suiza. University of Bern; Suiza
Fil: Dugoujon, Jean Michel. Université Paul Sabatier; Francia. Centre National de la Recherche Scientifique; Francia
Fil: Ruiz-Linares, Andres. Colegio Universitario de Londres; Reino Unido
description We report an integrated analysis of nuclear (autosomal, X- and Y-chromosome) short tandem repeat (STR) data and mtDNA D-loop sequences obtained in the same set of 22 Native populations from across the Americas. A north to south gradient of decreasing population diversity was observed, in agreement with a settlement of the Americas from the extreme northwest of the continent. This correlation is stronger with "least cost distances," which consider the coasts as facilitators of migration. Continent-wide estimates of population structure are highest for the Y-chromosome and lowest for the autosomes, consistent with the effective size of the different marker systems examined. Population differentiation is highest in East South America and lowest in Meso America and the Andean region. Regional analyses suggest a deviation from mutation-drift equilibrium consistent with population expansion in Meso America and the Andes and population contraction in Northwest and East South America. These data hint at an early divergence of Andean and non-Andean South Americans and at a contrasting demographic history for populations from these regions.
publishDate 2010
dc.date.none.fl_str_mv 2010-11
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/11336/95481
Yang, Ning Ning; Mazières, Stephane; Bravi, Claudio Marcelo; Ray, Nicolas; Wang, Sijia; et al.; Contrasting Patterns of Nuclear and mtDNA Diversity in Native American Populations; Wiley Blackwell Publishing, Inc; Annals Of Human Genetics; 74; 6; 11-2010; 525-538
0003-4800
CONICET Digital
CONICET
url http://hdl.handle.net/11336/95481
identifier_str_mv Yang, Ning Ning; Mazières, Stephane; Bravi, Claudio Marcelo; Ray, Nicolas; Wang, Sijia; et al.; Contrasting Patterns of Nuclear and mtDNA Diversity in Native American Populations; Wiley Blackwell Publishing, Inc; Annals Of Human Genetics; 74; 6; 11-2010; 525-538
0003-4800
CONICET Digital
CONICET
dc.language.none.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv info:eu-repo/semantics/altIdentifier/url/https://onlinelibrary.wiley.com/doi/abs/10.1111/j.1469-1809.2010.00608.x
info:eu-repo/semantics/altIdentifier/doi/10.1111/j.1469-1809.2010.00608.x
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
eu_rights_str_mv openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
dc.format.none.fl_str_mv application/pdf
application/pdf
dc.publisher.none.fl_str_mv Wiley Blackwell Publishing, Inc
publisher.none.fl_str_mv Wiley Blackwell Publishing, Inc
dc.source.none.fl_str_mv reponame:CONICET Digital (CONICET)
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reponame_str CONICET Digital (CONICET)
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instname_str Consejo Nacional de Investigaciones Científicas y Técnicas
repository.name.fl_str_mv CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas
repository.mail.fl_str_mv dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar
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