An evaluation of the ecological niche of Orf virus (Poxviridae): Challenges of distinguishing broad niches from no niches
- Autores
- Raveendran Nair, Rahul; Nakazawa, Yoshinori; Peterson, A. Townsend
- Año de publicación
- 2024
- Idioma
- inglés
- Tipo de recurso
- artículo
- Estado
- versión publicada
- Descripción
- Contagious ecthyma is a skin disease, caused by Orf virus, creating great economic threats to livestock farming worldwide. Zoonotic potential of this disease has gained recent attention owing to the re-emergence of disease in several parts of the world. Increased public health concern emphasizes the need for a predictive understanding of the geographic distributional potential of Orf virus. Here, we mapped the current distribution using occurrence records, and estimated the ecological niche in both geographical and environmental spaces. Twenty modeling experiments, resulting from two- and three-partition models, were performed to choose the candidate models that best represent the geographic distributional potential of Orf virus. For all of our models, it was possible to reject the null hypothesis of predictive performance no better than random expectations. However, statistical significance must be accompanied by sufficiently good predictive performance if a model is to be useful. In our case, omission of known distribution of the virus was noticed in all Maxent models, indicating inferior quality of our models. This conclusion was further confirmed by the independent final evaluation, using occurrence records sourced from the Centre for Agriculture and Bioscience International. Minimum volume ellipsoid (MVE) models indicated the broad range of environmental conditions under which Orf virus infections are found. The excluded climatic conditions from MVEs could not be considered as unsuitable owing to the broad distribution of Orf virus. These results suggest two possibilities: that the niche models fail to identify niche limits that constrain the virus, or that the virus has no detectable niche, as it can be found throughout the geographic distributions of its hosts. This potential limitation of component-based pathogen-only ENMs is discussed in detail.
Fil: Raveendran Nair, Rahul. University of Kansas; Estados Unidos. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Instituto Multidisciplinario de Biología Vegetal. Universidad Nacional de Córdoba. Facultad de Ciencias Exactas Físicas y Naturales. Instituto Multidisciplinario de Biología Vegetal; Argentina
Fil: Nakazawa, Yoshinori. Centers for Disease Control and Prevention; Estados Unidos
Fil: Peterson, A. Townsend. University of Kansas; Estados Unidos - Materia
-
ORF
ECOLOGICAL NICHES
MAXENT
MINIMUM VOLUME ELLIPSOID - Nivel de accesibilidad
- acceso abierto
- Condiciones de uso
- https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
- Repositorio
- Institución
- Consejo Nacional de Investigaciones Científicas y Técnicas
- OAI Identificador
- oai:ri.conicet.gov.ar:11336/260844
Ver los metadatos del registro completo
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An evaluation of the ecological niche of Orf virus (Poxviridae): Challenges of distinguishing broad niches from no nichesRaveendran Nair, RahulNakazawa, YoshinoriPeterson, A. TownsendORFECOLOGICAL NICHESMAXENTMINIMUM VOLUME ELLIPSOIDhttps://purl.org/becyt/ford/1.6https://purl.org/becyt/ford/1Contagious ecthyma is a skin disease, caused by Orf virus, creating great economic threats to livestock farming worldwide. Zoonotic potential of this disease has gained recent attention owing to the re-emergence of disease in several parts of the world. Increased public health concern emphasizes the need for a predictive understanding of the geographic distributional potential of Orf virus. Here, we mapped the current distribution using occurrence records, and estimated the ecological niche in both geographical and environmental spaces. Twenty modeling experiments, resulting from two- and three-partition models, were performed to choose the candidate models that best represent the geographic distributional potential of Orf virus. For all of our models, it was possible to reject the null hypothesis of predictive performance no better than random expectations. However, statistical significance must be accompanied by sufficiently good predictive performance if a model is to be useful. In our case, omission of known distribution of the virus was noticed in all Maxent models, indicating inferior quality of our models. This conclusion was further confirmed by the independent final evaluation, using occurrence records sourced from the Centre for Agriculture and Bioscience International. Minimum volume ellipsoid (MVE) models indicated the broad range of environmental conditions under which Orf virus infections are found. The excluded climatic conditions from MVEs could not be considered as unsuitable owing to the broad distribution of Orf virus. These results suggest two possibilities: that the niche models fail to identify niche limits that constrain the virus, or that the virus has no detectable niche, as it can be found throughout the geographic distributions of its hosts. This potential limitation of component-based pathogen-only ENMs is discussed in detail.Fil: Raveendran Nair, Rahul. University of Kansas; Estados Unidos. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Instituto Multidisciplinario de Biología Vegetal. Universidad Nacional de Córdoba. Facultad de Ciencias Exactas Físicas y Naturales. Instituto Multidisciplinario de Biología Vegetal; ArgentinaFil: Nakazawa, Yoshinori. Centers for Disease Control and Prevention; Estados UnidosFil: Peterson, A. Townsend. University of Kansas; Estados UnidosPublic Library of Science2024-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/260844Raveendran Nair, Rahul; Nakazawa, Yoshinori; Peterson, A. Townsend; An evaluation of the ecological niche of Orf virus (Poxviridae): Challenges of distinguishing broad niches from no niches; Public Library of Science; Plos One; 19; 1; 1-2024; 1-191932-6203CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/url/https://dx.plos.org/10.1371/journal.pone.0293312info:eu-repo/semantics/altIdentifier/doi/10.1371/journal.pone.0293312info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-sa/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-10-15T14:29:30Zoai:ri.conicet.gov.ar:11336/260844instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-10-15 14:29:30.753CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse |
dc.title.none.fl_str_mv |
An evaluation of the ecological niche of Orf virus (Poxviridae): Challenges of distinguishing broad niches from no niches |
title |
An evaluation of the ecological niche of Orf virus (Poxviridae): Challenges of distinguishing broad niches from no niches |
spellingShingle |
An evaluation of the ecological niche of Orf virus (Poxviridae): Challenges of distinguishing broad niches from no niches Raveendran Nair, Rahul ORF ECOLOGICAL NICHES MAXENT MINIMUM VOLUME ELLIPSOID |
title_short |
An evaluation of the ecological niche of Orf virus (Poxviridae): Challenges of distinguishing broad niches from no niches |
title_full |
An evaluation of the ecological niche of Orf virus (Poxviridae): Challenges of distinguishing broad niches from no niches |
title_fullStr |
An evaluation of the ecological niche of Orf virus (Poxviridae): Challenges of distinguishing broad niches from no niches |
title_full_unstemmed |
An evaluation of the ecological niche of Orf virus (Poxviridae): Challenges of distinguishing broad niches from no niches |
title_sort |
An evaluation of the ecological niche of Orf virus (Poxviridae): Challenges of distinguishing broad niches from no niches |
dc.creator.none.fl_str_mv |
Raveendran Nair, Rahul Nakazawa, Yoshinori Peterson, A. Townsend |
author |
Raveendran Nair, Rahul |
author_facet |
Raveendran Nair, Rahul Nakazawa, Yoshinori Peterson, A. Townsend |
author_role |
author |
author2 |
Nakazawa, Yoshinori Peterson, A. Townsend |
author2_role |
author author |
dc.subject.none.fl_str_mv |
ORF ECOLOGICAL NICHES MAXENT MINIMUM VOLUME ELLIPSOID |
topic |
ORF ECOLOGICAL NICHES MAXENT MINIMUM VOLUME ELLIPSOID |
purl_subject.fl_str_mv |
https://purl.org/becyt/ford/1.6 https://purl.org/becyt/ford/1 |
dc.description.none.fl_txt_mv |
Contagious ecthyma is a skin disease, caused by Orf virus, creating great economic threats to livestock farming worldwide. Zoonotic potential of this disease has gained recent attention owing to the re-emergence of disease in several parts of the world. Increased public health concern emphasizes the need for a predictive understanding of the geographic distributional potential of Orf virus. Here, we mapped the current distribution using occurrence records, and estimated the ecological niche in both geographical and environmental spaces. Twenty modeling experiments, resulting from two- and three-partition models, were performed to choose the candidate models that best represent the geographic distributional potential of Orf virus. For all of our models, it was possible to reject the null hypothesis of predictive performance no better than random expectations. However, statistical significance must be accompanied by sufficiently good predictive performance if a model is to be useful. In our case, omission of known distribution of the virus was noticed in all Maxent models, indicating inferior quality of our models. This conclusion was further confirmed by the independent final evaluation, using occurrence records sourced from the Centre for Agriculture and Bioscience International. Minimum volume ellipsoid (MVE) models indicated the broad range of environmental conditions under which Orf virus infections are found. The excluded climatic conditions from MVEs could not be considered as unsuitable owing to the broad distribution of Orf virus. These results suggest two possibilities: that the niche models fail to identify niche limits that constrain the virus, or that the virus has no detectable niche, as it can be found throughout the geographic distributions of its hosts. This potential limitation of component-based pathogen-only ENMs is discussed in detail. Fil: Raveendran Nair, Rahul. University of Kansas; Estados Unidos. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Instituto Multidisciplinario de Biología Vegetal. Universidad Nacional de Córdoba. Facultad de Ciencias Exactas Físicas y Naturales. Instituto Multidisciplinario de Biología Vegetal; Argentina Fil: Nakazawa, Yoshinori. Centers for Disease Control and Prevention; Estados Unidos Fil: Peterson, A. Townsend. University of Kansas; Estados Unidos |
description |
Contagious ecthyma is a skin disease, caused by Orf virus, creating great economic threats to livestock farming worldwide. Zoonotic potential of this disease has gained recent attention owing to the re-emergence of disease in several parts of the world. Increased public health concern emphasizes the need for a predictive understanding of the geographic distributional potential of Orf virus. Here, we mapped the current distribution using occurrence records, and estimated the ecological niche in both geographical and environmental spaces. Twenty modeling experiments, resulting from two- and three-partition models, were performed to choose the candidate models that best represent the geographic distributional potential of Orf virus. For all of our models, it was possible to reject the null hypothesis of predictive performance no better than random expectations. However, statistical significance must be accompanied by sufficiently good predictive performance if a model is to be useful. In our case, omission of known distribution of the virus was noticed in all Maxent models, indicating inferior quality of our models. This conclusion was further confirmed by the independent final evaluation, using occurrence records sourced from the Centre for Agriculture and Bioscience International. Minimum volume ellipsoid (MVE) models indicated the broad range of environmental conditions under which Orf virus infections are found. The excluded climatic conditions from MVEs could not be considered as unsuitable owing to the broad distribution of Orf virus. These results suggest two possibilities: that the niche models fail to identify niche limits that constrain the virus, or that the virus has no detectable niche, as it can be found throughout the geographic distributions of its hosts. This potential limitation of component-based pathogen-only ENMs is discussed in detail. |
publishDate |
2024 |
dc.date.none.fl_str_mv |
2024-01 |
dc.type.none.fl_str_mv |
info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion http://purl.org/coar/resource_type/c_6501 info:ar-repo/semantics/articulo |
format |
article |
status_str |
publishedVersion |
dc.identifier.none.fl_str_mv |
http://hdl.handle.net/11336/260844 Raveendran Nair, Rahul; Nakazawa, Yoshinori; Peterson, A. Townsend; An evaluation of the ecological niche of Orf virus (Poxviridae): Challenges of distinguishing broad niches from no niches; Public Library of Science; Plos One; 19; 1; 1-2024; 1-19 1932-6203 CONICET Digital CONICET |
url |
http://hdl.handle.net/11336/260844 |
identifier_str_mv |
Raveendran Nair, Rahul; Nakazawa, Yoshinori; Peterson, A. Townsend; An evaluation of the ecological niche of Orf virus (Poxviridae): Challenges of distinguishing broad niches from no niches; Public Library of Science; Plos One; 19; 1; 1-2024; 1-19 1932-6203 CONICET Digital CONICET |
dc.language.none.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
info:eu-repo/semantics/altIdentifier/url/https://dx.plos.org/10.1371/journal.pone.0293312 info:eu-repo/semantics/altIdentifier/doi/10.1371/journal.pone.0293312 |
dc.rights.none.fl_str_mv |
info:eu-repo/semantics/openAccess https://creativecommons.org/licenses/by-nc-sa/2.5/ar/ |
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openAccess |
rights_invalid_str_mv |
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/ |
dc.format.none.fl_str_mv |
application/pdf application/pdf |
dc.publisher.none.fl_str_mv |
Public Library of Science |
publisher.none.fl_str_mv |
Public Library of Science |
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reponame:CONICET Digital (CONICET) instname:Consejo Nacional de Investigaciones Científicas y Técnicas |
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CONICET Digital (CONICET) |
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CONICET Digital (CONICET) |
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Consejo Nacional de Investigaciones Científicas y Técnicas |
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CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas |
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dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar |
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