Genetic variation in natural populations of Acacia visco (Fabaceae) belonging to two sub-regions of Argentina using AFLP

Autores
Pometti, Carolina Luciana; Bessega, Cecilia Fabiana; Vilardi, Juan Cesar; Ewens, Mauricio; Saidman, Beatriz Ofelia
Año de publicación
2016
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
Acacia visco is a tree native to South America that grows in central and northwest region of Argentina, north Chile and Bolivia and has also been introduced to Africa and naturalized in Europe. Little is known about genetic diversity and genetic structure of this species. Therefore, we studied natural Argentinean populations of A. visco using the AFLP technique, by determining the genetic diversity of the species and its genetic structure, considering the proportion of the species diversity explained within and between the two sub-regions where populations were this species is present in the country. Fourteen of the 445 loci obtained appeared to be under diversifying selection. The remaining 431 neutral loci showed a mean of 60.89 % of percentage of polymorphic loci. The estimates of genetic diversity HE were generally high. The FST (0.126) was highly significant, providing evidence for genetic structure among populations. Hierarchical AMOVA indicated that variation between sub-regions was 2.1 % and highly significant. The higher component of variance was found within populations (77.4 %). STRUCTURE analysis showed an optimal number of K = 6. This result was consistent with those obtained by UPGMA from Nei’s distances and Canonical Discriminant Analysis. Since differentiation of A. visco populations in sub-regions was highly significant, a suitable management strategy for the use of this species in restoration programs would be focus on sampling seeds of a high number of individual trees within populations and also ensure a comprehensive coverage of the entire ecological amplitude of this species.
Fil: Pometti, Carolina Luciana. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Ecología, Genética y Evolución de Buenos Aires. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Ecología, Genética y Evolución de Buenos Aires; Argentina
Fil: Bessega, Cecilia Fabiana. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Ecología, Genética y Evolución de Buenos Aires. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Ecología, Genética y Evolución de Buenos Aires; Argentina
Fil: Vilardi, Juan Cesar. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Ecología, Genética y Evolución de Buenos Aires. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Ecología, Genética y Evolución de Buenos Aires; Argentina
Fil: Ewens, Mauricio. Universidad Católica de Santiago del Estero; Argentina
Fil: Saidman, Beatriz Ofelia. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Ecología, Genética y Evolución de Buenos Aires. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Ecología, Genética y Evolución de Buenos Aires; Argentina
Materia
Acacia Visco
Aflp
Amova
Genetic Differentiation
Senegalia Visco
Structure
Nivel de accesibilidad
acceso abierto
Condiciones de uso
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
Repositorio
CONICET Digital (CONICET)
Institución
Consejo Nacional de Investigaciones Científicas y Técnicas
OAI Identificador
oai:ri.conicet.gov.ar:11336/60372
Acceder
id CONICETDig_d1e84b3bb9259e71261fe39bbae18c00
oai_identifier_str oai:ri.conicet.gov.ar:11336/60372
network_acronym_str CONICETDig
repository_id_str 3498
network_name_str CONICET Digital (CONICET)
spelling Genetic variation in natural populations of Acacia visco (Fabaceae) belonging to two sub-regions of Argentina using AFLPPometti, Carolina LucianaBessega, Cecilia FabianaVilardi, Juan CesarEwens, MauricioSaidman, Beatriz OfeliaAcacia ViscoAflpAmovaGenetic DifferentiationSenegalia ViscoStructurehttps://purl.org/becyt/ford/1.6https://purl.org/becyt/ford/1Acacia visco is a tree native to South America that grows in central and northwest region of Argentina, north Chile and Bolivia and has also been introduced to Africa and naturalized in Europe. Little is known about genetic diversity and genetic structure of this species. Therefore, we studied natural Argentinean populations of A. visco using the AFLP technique, by determining the genetic diversity of the species and its genetic structure, considering the proportion of the species diversity explained within and between the two sub-regions where populations were this species is present in the country. Fourteen of the 445 loci obtained appeared to be under diversifying selection. The remaining 431 neutral loci showed a mean of 60.89 % of percentage of polymorphic loci. The estimates of genetic diversity HE were generally high. The FST (0.126) was highly significant, providing evidence for genetic structure among populations. Hierarchical AMOVA indicated that variation between sub-regions was 2.1 % and highly significant. The higher component of variance was found within populations (77.4 %). STRUCTURE analysis showed an optimal number of K = 6. This result was consistent with those obtained by UPGMA from Nei’s distances and Canonical Discriminant Analysis. Since differentiation of A. visco populations in sub-regions was highly significant, a suitable management strategy for the use of this species in restoration programs would be focus on sampling seeds of a high number of individual trees within populations and also ensure a comprehensive coverage of the entire ecological amplitude of this species.Fil: Pometti, Carolina Luciana. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Ecología, Genética y Evolución de Buenos Aires. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Ecología, Genética y Evolución de Buenos Aires; ArgentinaFil: Bessega, Cecilia Fabiana. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Ecología, Genética y Evolución de Buenos Aires. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Ecología, Genética y Evolución de Buenos Aires; ArgentinaFil: Vilardi, Juan Cesar. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Ecología, Genética y Evolución de Buenos Aires. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Ecología, Genética y Evolución de Buenos Aires; ArgentinaFil: Ewens, Mauricio. Universidad Católica de Santiago del Estero; ArgentinaFil: Saidman, Beatriz Ofelia. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Ecología, Genética y Evolución de Buenos Aires. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Ecología, Genética y Evolución de Buenos Aires; ArgentinaSpringer Wien2016-08info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/60372Pometti, Carolina Luciana; Bessega, Cecilia Fabiana; Vilardi, Juan Cesar; Ewens, Mauricio; Saidman, Beatriz Ofelia; Genetic variation in natural populations of Acacia visco (Fabaceae) belonging to two sub-regions of Argentina using AFLP; Springer Wien; Plant Systematics and Evolution; 302; 7; 8-2016; 901-9100378-26972199-6881CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/doi/10.1007/s00606-016-1306-6info:eu-repo/semantics/altIdentifier/url/https://link.springer.com/article/10.1007%2Fs00606-016-1306-6info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-sa/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-09-29T09:43:46Zoai:ri.conicet.gov.ar:11336/60372instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-09-29 09:43:46.418CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse
dc.title.none.fl_str_mv Genetic variation in natural populations of Acacia visco (Fabaceae) belonging to two sub-regions of Argentina using AFLP
title Genetic variation in natural populations of Acacia visco (Fabaceae) belonging to two sub-regions of Argentina using AFLP
spellingShingle Genetic variation in natural populations of Acacia visco (Fabaceae) belonging to two sub-regions of Argentina using AFLP
Pometti, Carolina Luciana
Acacia Visco
Aflp
Amova
Genetic Differentiation
Senegalia Visco
Structure
title_short Genetic variation in natural populations of Acacia visco (Fabaceae) belonging to two sub-regions of Argentina using AFLP
title_full Genetic variation in natural populations of Acacia visco (Fabaceae) belonging to two sub-regions of Argentina using AFLP
title_fullStr Genetic variation in natural populations of Acacia visco (Fabaceae) belonging to two sub-regions of Argentina using AFLP
title_full_unstemmed Genetic variation in natural populations of Acacia visco (Fabaceae) belonging to two sub-regions of Argentina using AFLP
title_sort Genetic variation in natural populations of Acacia visco (Fabaceae) belonging to two sub-regions of Argentina using AFLP
dc.creator.none.fl_str_mv Pometti, Carolina Luciana
Bessega, Cecilia Fabiana
Vilardi, Juan Cesar
Ewens, Mauricio
Saidman, Beatriz Ofelia
author Pometti, Carolina Luciana
author_facet Pometti, Carolina Luciana
Bessega, Cecilia Fabiana
Vilardi, Juan Cesar
Ewens, Mauricio
Saidman, Beatriz Ofelia
author_role author
author2 Bessega, Cecilia Fabiana
Vilardi, Juan Cesar
Ewens, Mauricio
Saidman, Beatriz Ofelia
author2_role author
author
author
author
dc.subject.none.fl_str_mv Acacia Visco
Aflp
Amova
Genetic Differentiation
Senegalia Visco
Structure
topic Acacia Visco
Aflp
Amova
Genetic Differentiation
Senegalia Visco
Structure
purl_subject.fl_str_mv https://purl.org/becyt/ford/1.6
https://purl.org/becyt/ford/1
dc.description.none.fl_txt_mv Acacia visco is a tree native to South America that grows in central and northwest region of Argentina, north Chile and Bolivia and has also been introduced to Africa and naturalized in Europe. Little is known about genetic diversity and genetic structure of this species. Therefore, we studied natural Argentinean populations of A. visco using the AFLP technique, by determining the genetic diversity of the species and its genetic structure, considering the proportion of the species diversity explained within and between the two sub-regions where populations were this species is present in the country. Fourteen of the 445 loci obtained appeared to be under diversifying selection. The remaining 431 neutral loci showed a mean of 60.89 % of percentage of polymorphic loci. The estimates of genetic diversity HE were generally high. The FST (0.126) was highly significant, providing evidence for genetic structure among populations. Hierarchical AMOVA indicated that variation between sub-regions was 2.1 % and highly significant. The higher component of variance was found within populations (77.4 %). STRUCTURE analysis showed an optimal number of K = 6. This result was consistent with those obtained by UPGMA from Nei’s distances and Canonical Discriminant Analysis. Since differentiation of A. visco populations in sub-regions was highly significant, a suitable management strategy for the use of this species in restoration programs would be focus on sampling seeds of a high number of individual trees within populations and also ensure a comprehensive coverage of the entire ecological amplitude of this species.
Fil: Pometti, Carolina Luciana. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Ecología, Genética y Evolución de Buenos Aires. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Ecología, Genética y Evolución de Buenos Aires; Argentina
Fil: Bessega, Cecilia Fabiana. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Ecología, Genética y Evolución de Buenos Aires. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Ecología, Genética y Evolución de Buenos Aires; Argentina
Fil: Vilardi, Juan Cesar. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Ecología, Genética y Evolución de Buenos Aires. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Ecología, Genética y Evolución de Buenos Aires; Argentina
Fil: Ewens, Mauricio. Universidad Católica de Santiago del Estero; Argentina
Fil: Saidman, Beatriz Ofelia. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Ecología, Genética y Evolución de Buenos Aires. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Ecología, Genética y Evolución de Buenos Aires; Argentina
description Acacia visco is a tree native to South America that grows in central and northwest region of Argentina, north Chile and Bolivia and has also been introduced to Africa and naturalized in Europe. Little is known about genetic diversity and genetic structure of this species. Therefore, we studied natural Argentinean populations of A. visco using the AFLP technique, by determining the genetic diversity of the species and its genetic structure, considering the proportion of the species diversity explained within and between the two sub-regions where populations were this species is present in the country. Fourteen of the 445 loci obtained appeared to be under diversifying selection. The remaining 431 neutral loci showed a mean of 60.89 % of percentage of polymorphic loci. The estimates of genetic diversity HE were generally high. The FST (0.126) was highly significant, providing evidence for genetic structure among populations. Hierarchical AMOVA indicated that variation between sub-regions was 2.1 % and highly significant. The higher component of variance was found within populations (77.4 %). STRUCTURE analysis showed an optimal number of K = 6. This result was consistent with those obtained by UPGMA from Nei’s distances and Canonical Discriminant Analysis. Since differentiation of A. visco populations in sub-regions was highly significant, a suitable management strategy for the use of this species in restoration programs would be focus on sampling seeds of a high number of individual trees within populations and also ensure a comprehensive coverage of the entire ecological amplitude of this species.
publishDate 2016
dc.date.none.fl_str_mv 2016-08
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/11336/60372
Pometti, Carolina Luciana; Bessega, Cecilia Fabiana; Vilardi, Juan Cesar; Ewens, Mauricio; Saidman, Beatriz Ofelia; Genetic variation in natural populations of Acacia visco (Fabaceae) belonging to two sub-regions of Argentina using AFLP; Springer Wien; Plant Systematics and Evolution; 302; 7; 8-2016; 901-910
0378-2697
2199-6881
CONICET Digital
CONICET
url http://hdl.handle.net/11336/60372
identifier_str_mv Pometti, Carolina Luciana; Bessega, Cecilia Fabiana; Vilardi, Juan Cesar; Ewens, Mauricio; Saidman, Beatriz Ofelia; Genetic variation in natural populations of Acacia visco (Fabaceae) belonging to two sub-regions of Argentina using AFLP; Springer Wien; Plant Systematics and Evolution; 302; 7; 8-2016; 901-910
0378-2697
2199-6881
CONICET Digital
CONICET
dc.language.none.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv info:eu-repo/semantics/altIdentifier/doi/10.1007/s00606-016-1306-6
info:eu-repo/semantics/altIdentifier/url/https://link.springer.com/article/10.1007%2Fs00606-016-1306-6
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
eu_rights_str_mv openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
dc.format.none.fl_str_mv application/pdf
application/pdf
application/pdf
dc.publisher.none.fl_str_mv Springer Wien
publisher.none.fl_str_mv Springer Wien
dc.source.none.fl_str_mv reponame:CONICET Digital (CONICET)
instname:Consejo Nacional de Investigaciones Científicas y Técnicas
reponame_str CONICET Digital (CONICET)
collection CONICET Digital (CONICET)
instname_str Consejo Nacional de Investigaciones Científicas y Técnicas
repository.name.fl_str_mv CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas
repository.mail.fl_str_mv dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar
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score 13.070432

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