Spatially explicit inference for open populations: Estimating demographic parameters from camera-trap studies

Autores
Gardner, Beth; Reppucci, Juan Ignacio; Lucherini, Mauro; Royle, Andrew J.
Año de publicación
2010
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
We develop a hierarchical capture-recapture model for demographically open populations when auxiliary spatial information about location of capture is obtained. Such spatial capture-recapture data arise from studies based on camera trapping, DNA sampling, and other situations in which a spatial array of devices records encounters of unique individuals. We integrate an individual-based formulation of a Jolly-Seber type model with recently developed spatially explicit capture-recapture models to estimate density and demographic parameters for survival and recruitment. We adopt a Bayesian framework for inference under this model using the method of data augmentation which is implemented in the software program WinBUGS. The model was motivated by a camera trapping study of Pampas cats Leopardus colocolo from Argentina, which we present as an illustration of the model in this paper. We provide estimates of density and the first quantitative assessment of vital rates for the Pampas cat in the High Andes. The precision of these estimates is poor due likely to the sparse data set. Unlike conventional inference methods which usually rely on asymptotic arguments, Bayesian inferences are valid in arbitrary sample sizes, and thus the method is ideal for the study of rare or endangered species for which small data sets are typical.
Fil: Gardner, Beth. United States Geological Survey; Estados Unidos
Fil: Reppucci, Juan Ignacio. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Bahía Blanca; Argentina. Universidad Nacional del Sur. Departamento de Biología, Bioquímica y Farmacia; Argentina
Fil: Lucherini, Mauro. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Bahía Blanca; Argentina. Universidad Nacional del Sur. Departamento de Biología, Bioquímica y Farmacia; Argentina
Fil: Royle, Andrew J.. United States Geological Survey; Estados Unidos
Materia
Andes Mountains
Argentina
Bayesian Analysis
Camera Trapping
Data Augmentation
Hierarchical Model
Jolly-Seber Model
Pampas Cats
Spatial Capture-Recapture
Trapping Arrays
Nivel de accesibilidad
acceso abierto
Condiciones de uso
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
Repositorio
CONICET Digital (CONICET)
Institución
Consejo Nacional de Investigaciones Científicas y Técnicas
OAI Identificador
oai:ri.conicet.gov.ar:11336/68324
Acceder
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oai_identifier_str oai:ri.conicet.gov.ar:11336/68324
network_acronym_str CONICETDig
repository_id_str 3498
network_name_str CONICET Digital (CONICET)
spelling Spatially explicit inference for open populations: Estimating demographic parameters from camera-trap studiesGardner, BethReppucci, Juan IgnacioLucherini, MauroRoyle, Andrew J.Andes MountainsArgentinaBayesian AnalysisCamera TrappingData AugmentationHierarchical ModelJolly-Seber ModelPampas CatsSpatial Capture-RecaptureTrapping Arrayshttps://purl.org/becyt/ford/1.6https://purl.org/becyt/ford/1We develop a hierarchical capture-recapture model for demographically open populations when auxiliary spatial information about location of capture is obtained. Such spatial capture-recapture data arise from studies based on camera trapping, DNA sampling, and other situations in which a spatial array of devices records encounters of unique individuals. We integrate an individual-based formulation of a Jolly-Seber type model with recently developed spatially explicit capture-recapture models to estimate density and demographic parameters for survival and recruitment. We adopt a Bayesian framework for inference under this model using the method of data augmentation which is implemented in the software program WinBUGS. The model was motivated by a camera trapping study of Pampas cats Leopardus colocolo from Argentina, which we present as an illustration of the model in this paper. We provide estimates of density and the first quantitative assessment of vital rates for the Pampas cat in the High Andes. The precision of these estimates is poor due likely to the sparse data set. Unlike conventional inference methods which usually rely on asymptotic arguments, Bayesian inferences are valid in arbitrary sample sizes, and thus the method is ideal for the study of rare or endangered species for which small data sets are typical.Fil: Gardner, Beth. United States Geological Survey; Estados UnidosFil: Reppucci, Juan Ignacio. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Bahía Blanca; Argentina. Universidad Nacional del Sur. Departamento de Biología, Bioquímica y Farmacia; ArgentinaFil: Lucherini, Mauro. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Bahía Blanca; Argentina. Universidad Nacional del Sur. Departamento de Biología, Bioquímica y Farmacia; ArgentinaFil: Royle, Andrew J.. United States Geological Survey; Estados UnidosEcological Society of America2010-11-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/68324Gardner, Beth; Reppucci, Juan Ignacio; Lucherini, Mauro; Royle, Andrew J.; Spatially explicit inference for open populations: Estimating demographic parameters from camera-trap studies; Ecological Society of America; Ecology; 91; 11; 1-11-2010; 3376-33830012-9658CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/doi/10.1890/09-0804.1info:eu-repo/semantics/altIdentifier/url/https://esajournals.onlinelibrary.wiley.com/doi/10.1890/09-0804.1info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-sa/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-09-03T10:01:48Zoai:ri.conicet.gov.ar:11336/68324instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-09-03 10:01:49.087CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse
dc.title.none.fl_str_mv Spatially explicit inference for open populations: Estimating demographic parameters from camera-trap studies
title Spatially explicit inference for open populations: Estimating demographic parameters from camera-trap studies
spellingShingle Spatially explicit inference for open populations: Estimating demographic parameters from camera-trap studies
Gardner, Beth
Andes Mountains
Argentina
Bayesian Analysis
Camera Trapping
Data Augmentation
Hierarchical Model
Jolly-Seber Model
Pampas Cats
Spatial Capture-Recapture
Trapping Arrays
title_short Spatially explicit inference for open populations: Estimating demographic parameters from camera-trap studies
title_full Spatially explicit inference for open populations: Estimating demographic parameters from camera-trap studies
title_fullStr Spatially explicit inference for open populations: Estimating demographic parameters from camera-trap studies
title_full_unstemmed Spatially explicit inference for open populations: Estimating demographic parameters from camera-trap studies
title_sort Spatially explicit inference for open populations: Estimating demographic parameters from camera-trap studies
dc.creator.none.fl_str_mv Gardner, Beth
Reppucci, Juan Ignacio
Lucherini, Mauro
Royle, Andrew J.
author Gardner, Beth
author_facet Gardner, Beth
Reppucci, Juan Ignacio
Lucherini, Mauro
Royle, Andrew J.
author_role author
author2 Reppucci, Juan Ignacio
Lucherini, Mauro
Royle, Andrew J.
author2_role author
author
author
dc.subject.none.fl_str_mv Andes Mountains
Argentina
Bayesian Analysis
Camera Trapping
Data Augmentation
Hierarchical Model
Jolly-Seber Model
Pampas Cats
Spatial Capture-Recapture
Trapping Arrays
topic Andes Mountains
Argentina
Bayesian Analysis
Camera Trapping
Data Augmentation
Hierarchical Model
Jolly-Seber Model
Pampas Cats
Spatial Capture-Recapture
Trapping Arrays
purl_subject.fl_str_mv https://purl.org/becyt/ford/1.6
https://purl.org/becyt/ford/1
dc.description.none.fl_txt_mv We develop a hierarchical capture-recapture model for demographically open populations when auxiliary spatial information about location of capture is obtained. Such spatial capture-recapture data arise from studies based on camera trapping, DNA sampling, and other situations in which a spatial array of devices records encounters of unique individuals. We integrate an individual-based formulation of a Jolly-Seber type model with recently developed spatially explicit capture-recapture models to estimate density and demographic parameters for survival and recruitment. We adopt a Bayesian framework for inference under this model using the method of data augmentation which is implemented in the software program WinBUGS. The model was motivated by a camera trapping study of Pampas cats Leopardus colocolo from Argentina, which we present as an illustration of the model in this paper. We provide estimates of density and the first quantitative assessment of vital rates for the Pampas cat in the High Andes. The precision of these estimates is poor due likely to the sparse data set. Unlike conventional inference methods which usually rely on asymptotic arguments, Bayesian inferences are valid in arbitrary sample sizes, and thus the method is ideal for the study of rare or endangered species for which small data sets are typical.
Fil: Gardner, Beth. United States Geological Survey; Estados Unidos
Fil: Reppucci, Juan Ignacio. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Bahía Blanca; Argentina. Universidad Nacional del Sur. Departamento de Biología, Bioquímica y Farmacia; Argentina
Fil: Lucherini, Mauro. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Bahía Blanca; Argentina. Universidad Nacional del Sur. Departamento de Biología, Bioquímica y Farmacia; Argentina
Fil: Royle, Andrew J.. United States Geological Survey; Estados Unidos
description We develop a hierarchical capture-recapture model for demographically open populations when auxiliary spatial information about location of capture is obtained. Such spatial capture-recapture data arise from studies based on camera trapping, DNA sampling, and other situations in which a spatial array of devices records encounters of unique individuals. We integrate an individual-based formulation of a Jolly-Seber type model with recently developed spatially explicit capture-recapture models to estimate density and demographic parameters for survival and recruitment. We adopt a Bayesian framework for inference under this model using the method of data augmentation which is implemented in the software program WinBUGS. The model was motivated by a camera trapping study of Pampas cats Leopardus colocolo from Argentina, which we present as an illustration of the model in this paper. We provide estimates of density and the first quantitative assessment of vital rates for the Pampas cat in the High Andes. The precision of these estimates is poor due likely to the sparse data set. Unlike conventional inference methods which usually rely on asymptotic arguments, Bayesian inferences are valid in arbitrary sample sizes, and thus the method is ideal for the study of rare or endangered species for which small data sets are typical.
publishDate 2010
dc.date.none.fl_str_mv 2010-11-01
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/11336/68324
Gardner, Beth; Reppucci, Juan Ignacio; Lucherini, Mauro; Royle, Andrew J.; Spatially explicit inference for open populations: Estimating demographic parameters from camera-trap studies; Ecological Society of America; Ecology; 91; 11; 1-11-2010; 3376-3383
0012-9658
CONICET Digital
CONICET
url http://hdl.handle.net/11336/68324
identifier_str_mv Gardner, Beth; Reppucci, Juan Ignacio; Lucherini, Mauro; Royle, Andrew J.; Spatially explicit inference for open populations: Estimating demographic parameters from camera-trap studies; Ecological Society of America; Ecology; 91; 11; 1-11-2010; 3376-3383
0012-9658
CONICET Digital
CONICET
dc.language.none.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv info:eu-repo/semantics/altIdentifier/doi/10.1890/09-0804.1
info:eu-repo/semantics/altIdentifier/url/https://esajournals.onlinelibrary.wiley.com/doi/10.1890/09-0804.1
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
eu_rights_str_mv openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
dc.format.none.fl_str_mv application/pdf
application/pdf
dc.publisher.none.fl_str_mv Ecological Society of America
publisher.none.fl_str_mv Ecological Society of America
dc.source.none.fl_str_mv reponame:CONICET Digital (CONICET)
instname:Consejo Nacional de Investigaciones Científicas y Técnicas
reponame_str CONICET Digital (CONICET)
collection CONICET Digital (CONICET)
instname_str Consejo Nacional de Investigaciones Científicas y Técnicas
repository.name.fl_str_mv CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas
repository.mail.fl_str_mv dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar
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score 13.13397

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