Delineation of the pan-proteome of fish-pathogenic Streptococcus agalactiae strains using a label-free shotgun approach
- Autores
- Tavares Campos, Guilherme; Pereira, Felipe Luiz; Morais Barony, Gustavo; Perdigão Rezende, Cristiana; Marques Da Silva, Wanderson; Martins Ferreira de Souza, Gustavo Henrique; Verano Braga, Thiago; De Carvalho Azevedo, Vasco Ariston; Gomes Leal, Carlos Augusto; Pereira Figueiredo, Henrique César
- Año de publicación
- 2019
- Idioma
- inglés
- Tipo de recurso
- artículo
- Estado
- versión publicada
- Descripción
- Background: Streptococcus agalactiae (GBS) is a major pathogen of Nile tilapia, a global commodity of the aquaculture sector. The aims of this study were to evaluate protein expression in the main genotypes of GBS isolated from diseased fishes in Brazil using a label-free shotgun nano-liquid chromatography-ultra definition mass spectrometry (nanoLC-UDMS E ) approach and to compare the differential abundance of proteins identified in strains isolated from GBS-infected fishes and humans. Results: A total of 1070 protein clusters were identified by nanoLC-UDMS E in 5 fish-adapted GBS strains belonging to sequence types ST-260 and ST-927 and the non-typeable (NT) lineage and 1 human GBS strain (ST-23). A total of 1065 protein clusters corresponded to the pan-proteome of fish-adapted GBS strains; 989 of these were identified in all fish-adapted GBS strains (core proteome), and 62 were shared by at least two strains (accessory proteome). Proteins involved in the stress response and in the regulation of gene expression, metabolism and virulence were detected, reflecting the adaptive ability of fish-adapted GBS strains in response to stressor factors that affect bacterial survival in the aquatic environment and bacterial survival and multiplication inside the host cell. Measurement of protein abundance among different hosts showed that 5 and 26 proteins were exclusively found in the human- and fish-adapted GBS strains, respectively; the proteins exclusively identified in fish isolates were mainly related to virulence factors. Furthermore, 215 and 269 proteins were up- and down-regulated, respectively, in the fish-adapted GBS strains in comparison to the human isolate. Conclusions: Our study showed that the core proteome of fish-adapted GBS strains is conserved and demonstrated high similarity of the proteins expressed by fish-adapted strains to the proteome of the human GBS strain. This high degree of proteome conservation of different STs suggests that, a monovalent vaccine may be effective against these variants.
Fil: Tavares Campos, Guilherme. Universidade Federal de Minas Gerais; Brasil
Fil: Pereira, Felipe Luiz. Universidade Federal de Minas Gerais; Brasil
Fil: Morais Barony, Gustavo. Universidade Federal de Minas Gerais; Brasil
Fil: Perdigão Rezende, Cristiana. Universidade Federal de Minas Gerais; Brasil
Fil: Marques Da Silva, Wanderson. Universidade Federal de Minas Gerais; Brasil. Instituto Nacional de Tecnología Agropecuaria. Centro de Investigación en Ciencias Veterinarias y Agronómicas. Instituto de Agrobiotecnología y Biología Molecular. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Parque Centenario. Instituto de Agrobiotecnología y Biología Molecular; Argentina
Fil: Martins Ferreira de Souza, Gustavo Henrique. No especifíca;
Fil: Verano Braga, Thiago. Universidade Federal de Minas Gerais; Brasil
Fil: De Carvalho Azevedo, Vasco Ariston. Universidade Federal de Minas Gerais; Brasil
Fil: Gomes Leal, Carlos Augusto. Universidade Federal de Minas Gerais; Brasil
Fil: Pereira Figueiredo, Henrique César. Universidade Federal de Minas Gerais; Brasil - Materia
-
COMPARATIVE PROTEOMICS
FISH
GBS
GENOTYPES
HUMAN
STREPTOCOCCUS AGALACTIAE - Nivel de accesibilidad
- acceso abierto
- Condiciones de uso
- https://creativecommons.org/licenses/by/2.5/ar/
- Repositorio
- Institución
- Consejo Nacional de Investigaciones Científicas y Técnicas
- OAI Identificador
- oai:ri.conicet.gov.ar:11336/149004
Ver los metadatos del registro completo
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oai:ri.conicet.gov.ar:11336/149004 |
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3498 |
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CONICET Digital (CONICET) |
spelling |
Delineation of the pan-proteome of fish-pathogenic Streptococcus agalactiae strains using a label-free shotgun approachTavares Campos, GuilhermePereira, Felipe LuizMorais Barony, GustavoPerdigão Rezende, CristianaMarques Da Silva, WandersonMartins Ferreira de Souza, Gustavo HenriqueVerano Braga, ThiagoDe Carvalho Azevedo, Vasco AristonGomes Leal, Carlos AugustoPereira Figueiredo, Henrique CésarCOMPARATIVE PROTEOMICSFISHGBSGENOTYPESHUMANSTREPTOCOCCUS AGALACTIAEhttps://purl.org/becyt/ford/1.6https://purl.org/becyt/ford/1Background: Streptococcus agalactiae (GBS) is a major pathogen of Nile tilapia, a global commodity of the aquaculture sector. The aims of this study were to evaluate protein expression in the main genotypes of GBS isolated from diseased fishes in Brazil using a label-free shotgun nano-liquid chromatography-ultra definition mass spectrometry (nanoLC-UDMS E ) approach and to compare the differential abundance of proteins identified in strains isolated from GBS-infected fishes and humans. Results: A total of 1070 protein clusters were identified by nanoLC-UDMS E in 5 fish-adapted GBS strains belonging to sequence types ST-260 and ST-927 and the non-typeable (NT) lineage and 1 human GBS strain (ST-23). A total of 1065 protein clusters corresponded to the pan-proteome of fish-adapted GBS strains; 989 of these were identified in all fish-adapted GBS strains (core proteome), and 62 were shared by at least two strains (accessory proteome). Proteins involved in the stress response and in the regulation of gene expression, metabolism and virulence were detected, reflecting the adaptive ability of fish-adapted GBS strains in response to stressor factors that affect bacterial survival in the aquatic environment and bacterial survival and multiplication inside the host cell. Measurement of protein abundance among different hosts showed that 5 and 26 proteins were exclusively found in the human- and fish-adapted GBS strains, respectively; the proteins exclusively identified in fish isolates were mainly related to virulence factors. Furthermore, 215 and 269 proteins were up- and down-regulated, respectively, in the fish-adapted GBS strains in comparison to the human isolate. Conclusions: Our study showed that the core proteome of fish-adapted GBS strains is conserved and demonstrated high similarity of the proteins expressed by fish-adapted strains to the proteome of the human GBS strain. This high degree of proteome conservation of different STs suggests that, a monovalent vaccine may be effective against these variants.Fil: Tavares Campos, Guilherme. Universidade Federal de Minas Gerais; BrasilFil: Pereira, Felipe Luiz. Universidade Federal de Minas Gerais; BrasilFil: Morais Barony, Gustavo. Universidade Federal de Minas Gerais; BrasilFil: Perdigão Rezende, Cristiana. Universidade Federal de Minas Gerais; BrasilFil: Marques Da Silva, Wanderson. Universidade Federal de Minas Gerais; Brasil. Instituto Nacional de Tecnología Agropecuaria. Centro de Investigación en Ciencias Veterinarias y Agronómicas. Instituto de Agrobiotecnología y Biología Molecular. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Parque Centenario. Instituto de Agrobiotecnología y Biología Molecular; ArgentinaFil: Martins Ferreira de Souza, Gustavo Henrique. No especifíca;Fil: Verano Braga, Thiago. Universidade Federal de Minas Gerais; BrasilFil: De Carvalho Azevedo, Vasco Ariston. Universidade Federal de Minas Gerais; BrasilFil: Gomes Leal, Carlos Augusto. Universidade Federal de Minas Gerais; BrasilFil: Pereira Figueiredo, Henrique César. Universidade Federal de Minas Gerais; BrasilBioMed Central2019-01-07info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/149004Tavares Campos, Guilherme; Pereira, Felipe Luiz; Morais Barony, Gustavo; Perdigão Rezende, Cristiana; Marques Da Silva, Wanderson; et al.; Delineation of the pan-proteome of fish-pathogenic Streptococcus agalactiae strains using a label-free shotgun approach; BioMed Central; BMC Genomics; 20; 1; 7-1-2019; 1-221471-2164CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/url/https://bmcgenomics.biomedcentral.com/articles/10.1186/s12864-018-5423-1info:eu-repo/semantics/altIdentifier/doi/10.1186/s12864-018-5423-1info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-09-29T09:38:48Zoai:ri.conicet.gov.ar:11336/149004instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-09-29 09:38:49.069CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse |
dc.title.none.fl_str_mv |
Delineation of the pan-proteome of fish-pathogenic Streptococcus agalactiae strains using a label-free shotgun approach |
title |
Delineation of the pan-proteome of fish-pathogenic Streptococcus agalactiae strains using a label-free shotgun approach |
spellingShingle |
Delineation of the pan-proteome of fish-pathogenic Streptococcus agalactiae strains using a label-free shotgun approach Tavares Campos, Guilherme COMPARATIVE PROTEOMICS FISH GBS GENOTYPES HUMAN STREPTOCOCCUS AGALACTIAE |
title_short |
Delineation of the pan-proteome of fish-pathogenic Streptococcus agalactiae strains using a label-free shotgun approach |
title_full |
Delineation of the pan-proteome of fish-pathogenic Streptococcus agalactiae strains using a label-free shotgun approach |
title_fullStr |
Delineation of the pan-proteome of fish-pathogenic Streptococcus agalactiae strains using a label-free shotgun approach |
title_full_unstemmed |
Delineation of the pan-proteome of fish-pathogenic Streptococcus agalactiae strains using a label-free shotgun approach |
title_sort |
Delineation of the pan-proteome of fish-pathogenic Streptococcus agalactiae strains using a label-free shotgun approach |
dc.creator.none.fl_str_mv |
Tavares Campos, Guilherme Pereira, Felipe Luiz Morais Barony, Gustavo Perdigão Rezende, Cristiana Marques Da Silva, Wanderson Martins Ferreira de Souza, Gustavo Henrique Verano Braga, Thiago De Carvalho Azevedo, Vasco Ariston Gomes Leal, Carlos Augusto Pereira Figueiredo, Henrique César |
author |
Tavares Campos, Guilherme |
author_facet |
Tavares Campos, Guilherme Pereira, Felipe Luiz Morais Barony, Gustavo Perdigão Rezende, Cristiana Marques Da Silva, Wanderson Martins Ferreira de Souza, Gustavo Henrique Verano Braga, Thiago De Carvalho Azevedo, Vasco Ariston Gomes Leal, Carlos Augusto Pereira Figueiredo, Henrique César |
author_role |
author |
author2 |
Pereira, Felipe Luiz Morais Barony, Gustavo Perdigão Rezende, Cristiana Marques Da Silva, Wanderson Martins Ferreira de Souza, Gustavo Henrique Verano Braga, Thiago De Carvalho Azevedo, Vasco Ariston Gomes Leal, Carlos Augusto Pereira Figueiredo, Henrique César |
author2_role |
author author author author author author author author author |
dc.subject.none.fl_str_mv |
COMPARATIVE PROTEOMICS FISH GBS GENOTYPES HUMAN STREPTOCOCCUS AGALACTIAE |
topic |
COMPARATIVE PROTEOMICS FISH GBS GENOTYPES HUMAN STREPTOCOCCUS AGALACTIAE |
purl_subject.fl_str_mv |
https://purl.org/becyt/ford/1.6 https://purl.org/becyt/ford/1 |
dc.description.none.fl_txt_mv |
Background: Streptococcus agalactiae (GBS) is a major pathogen of Nile tilapia, a global commodity of the aquaculture sector. The aims of this study were to evaluate protein expression in the main genotypes of GBS isolated from diseased fishes in Brazil using a label-free shotgun nano-liquid chromatography-ultra definition mass spectrometry (nanoLC-UDMS E ) approach and to compare the differential abundance of proteins identified in strains isolated from GBS-infected fishes and humans. Results: A total of 1070 protein clusters were identified by nanoLC-UDMS E in 5 fish-adapted GBS strains belonging to sequence types ST-260 and ST-927 and the non-typeable (NT) lineage and 1 human GBS strain (ST-23). A total of 1065 protein clusters corresponded to the pan-proteome of fish-adapted GBS strains; 989 of these were identified in all fish-adapted GBS strains (core proteome), and 62 were shared by at least two strains (accessory proteome). Proteins involved in the stress response and in the regulation of gene expression, metabolism and virulence were detected, reflecting the adaptive ability of fish-adapted GBS strains in response to stressor factors that affect bacterial survival in the aquatic environment and bacterial survival and multiplication inside the host cell. Measurement of protein abundance among different hosts showed that 5 and 26 proteins were exclusively found in the human- and fish-adapted GBS strains, respectively; the proteins exclusively identified in fish isolates were mainly related to virulence factors. Furthermore, 215 and 269 proteins were up- and down-regulated, respectively, in the fish-adapted GBS strains in comparison to the human isolate. Conclusions: Our study showed that the core proteome of fish-adapted GBS strains is conserved and demonstrated high similarity of the proteins expressed by fish-adapted strains to the proteome of the human GBS strain. This high degree of proteome conservation of different STs suggests that, a monovalent vaccine may be effective against these variants. Fil: Tavares Campos, Guilherme. Universidade Federal de Minas Gerais; Brasil Fil: Pereira, Felipe Luiz. Universidade Federal de Minas Gerais; Brasil Fil: Morais Barony, Gustavo. Universidade Federal de Minas Gerais; Brasil Fil: Perdigão Rezende, Cristiana. Universidade Federal de Minas Gerais; Brasil Fil: Marques Da Silva, Wanderson. Universidade Federal de Minas Gerais; Brasil. Instituto Nacional de Tecnología Agropecuaria. Centro de Investigación en Ciencias Veterinarias y Agronómicas. Instituto de Agrobiotecnología y Biología Molecular. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Parque Centenario. Instituto de Agrobiotecnología y Biología Molecular; Argentina Fil: Martins Ferreira de Souza, Gustavo Henrique. No especifíca; Fil: Verano Braga, Thiago. Universidade Federal de Minas Gerais; Brasil Fil: De Carvalho Azevedo, Vasco Ariston. Universidade Federal de Minas Gerais; Brasil Fil: Gomes Leal, Carlos Augusto. Universidade Federal de Minas Gerais; Brasil Fil: Pereira Figueiredo, Henrique César. Universidade Federal de Minas Gerais; Brasil |
description |
Background: Streptococcus agalactiae (GBS) is a major pathogen of Nile tilapia, a global commodity of the aquaculture sector. The aims of this study were to evaluate protein expression in the main genotypes of GBS isolated from diseased fishes in Brazil using a label-free shotgun nano-liquid chromatography-ultra definition mass spectrometry (nanoLC-UDMS E ) approach and to compare the differential abundance of proteins identified in strains isolated from GBS-infected fishes and humans. Results: A total of 1070 protein clusters were identified by nanoLC-UDMS E in 5 fish-adapted GBS strains belonging to sequence types ST-260 and ST-927 and the non-typeable (NT) lineage and 1 human GBS strain (ST-23). A total of 1065 protein clusters corresponded to the pan-proteome of fish-adapted GBS strains; 989 of these were identified in all fish-adapted GBS strains (core proteome), and 62 were shared by at least two strains (accessory proteome). Proteins involved in the stress response and in the regulation of gene expression, metabolism and virulence were detected, reflecting the adaptive ability of fish-adapted GBS strains in response to stressor factors that affect bacterial survival in the aquatic environment and bacterial survival and multiplication inside the host cell. Measurement of protein abundance among different hosts showed that 5 and 26 proteins were exclusively found in the human- and fish-adapted GBS strains, respectively; the proteins exclusively identified in fish isolates were mainly related to virulence factors. Furthermore, 215 and 269 proteins were up- and down-regulated, respectively, in the fish-adapted GBS strains in comparison to the human isolate. Conclusions: Our study showed that the core proteome of fish-adapted GBS strains is conserved and demonstrated high similarity of the proteins expressed by fish-adapted strains to the proteome of the human GBS strain. This high degree of proteome conservation of different STs suggests that, a monovalent vaccine may be effective against these variants. |
publishDate |
2019 |
dc.date.none.fl_str_mv |
2019-01-07 |
dc.type.none.fl_str_mv |
info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion http://purl.org/coar/resource_type/c_6501 info:ar-repo/semantics/articulo |
format |
article |
status_str |
publishedVersion |
dc.identifier.none.fl_str_mv |
http://hdl.handle.net/11336/149004 Tavares Campos, Guilherme; Pereira, Felipe Luiz; Morais Barony, Gustavo; Perdigão Rezende, Cristiana; Marques Da Silva, Wanderson; et al.; Delineation of the pan-proteome of fish-pathogenic Streptococcus agalactiae strains using a label-free shotgun approach; BioMed Central; BMC Genomics; 20; 1; 7-1-2019; 1-22 1471-2164 CONICET Digital CONICET |
url |
http://hdl.handle.net/11336/149004 |
identifier_str_mv |
Tavares Campos, Guilherme; Pereira, Felipe Luiz; Morais Barony, Gustavo; Perdigão Rezende, Cristiana; Marques Da Silva, Wanderson; et al.; Delineation of the pan-proteome of fish-pathogenic Streptococcus agalactiae strains using a label-free shotgun approach; BioMed Central; BMC Genomics; 20; 1; 7-1-2019; 1-22 1471-2164 CONICET Digital CONICET |
dc.language.none.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
info:eu-repo/semantics/altIdentifier/url/https://bmcgenomics.biomedcentral.com/articles/10.1186/s12864-018-5423-1 info:eu-repo/semantics/altIdentifier/doi/10.1186/s12864-018-5423-1 |
dc.rights.none.fl_str_mv |
info:eu-repo/semantics/openAccess https://creativecommons.org/licenses/by/2.5/ar/ |
eu_rights_str_mv |
openAccess |
rights_invalid_str_mv |
https://creativecommons.org/licenses/by/2.5/ar/ |
dc.format.none.fl_str_mv |
application/pdf application/pdf |
dc.publisher.none.fl_str_mv |
BioMed Central |
publisher.none.fl_str_mv |
BioMed Central |
dc.source.none.fl_str_mv |
reponame:CONICET Digital (CONICET) instname:Consejo Nacional de Investigaciones Científicas y Técnicas |
reponame_str |
CONICET Digital (CONICET) |
collection |
CONICET Digital (CONICET) |
instname_str |
Consejo Nacional de Investigaciones Científicas y Técnicas |
repository.name.fl_str_mv |
CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas |
repository.mail.fl_str_mv |
dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar |
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1844613227233673216 |
score |
13.070432 |