Grapevine genetics after the genome sequence: Challenges and limitations

Autores
Martínez Zapater, José M.; Carmona, M. J.; Diaz Riquelme, J.; Fernández, L.; Lijavetzky, Diego Claudio
Año de publicación
2010
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
The publication of the genome sequences of inbred grapevine plant PN40024 and the cultivar Pinot Noir has provided a new generation of molecular tools and has opened the way to functional genomics in grapevine. Establishing gene biological function is now a major challenge requiring the parallel development of molecular and genetic information. New massive pyrosequencing technologies will ensure no shortage of nucleotide sequence information. However, genetic analysis and genetic tools in grapevine still require additional development. Exploiting the existing natural genetic variation in Vitis vinifera L. and other inter-fertile Vitis species should be a priority to focus functional analyses on genes contributing to phenotypic variation because their genetic variation constitutes the basis for genetic improvement of classical cultivars and for the development of new ones. In this review, we discussed the current molecular and genetic tools available in grapevine and considered those that need to be developed to exploit natural genetic variation in the analyses of gene function. We also reviewed the scarce information on the genetic and molecular structure of relevant grapevine traits and proposed future directions.
Fil: Martínez Zapater, José M.. Consejo Superior de Investigaciones Cientificas. Center For Research In Agricultural Genomics; España
Fil: Carmona, M. J.. Universidad Politécnica de Madrid; España
Fil: Diaz Riquelme, J.. Universidad Politécnica de Madrid; España
Fil: Fernández, L.. Consejo Superior de Investigaciones Cientificas. Center For Research In Agricultural Genomics; España
Fil: Lijavetzky, Diego Claudio. Consejo Superior de Investigaciones Cientificas. Center For Research In Agricultural Genomics; España. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Mendoza. Instituto de Biología Agrícola de Mendoza. Universidad Nacional de Cuyo. Facultad de Ciencias Agrarias. Instituto de Biología Agrícola de Mendoza; Argentina
Materia
Grapevine genetics
Genetic resources
Genetic tools
Natural genetic variation
Nivel de accesibilidad
acceso abierto
Condiciones de uso
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
Repositorio
CONICET Digital (CONICET)
Institución
Consejo Nacional de Investigaciones Científicas y Técnicas
OAI Identificador
oai:ri.conicet.gov.ar:11336/106854
Acceder
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network_name_str CONICET Digital (CONICET)
spelling Grapevine genetics after the genome sequence: Challenges and limitationsMartínez Zapater, José M.Carmona, M. J.Diaz Riquelme, J.Fernández, L.Lijavetzky, Diego ClaudioGrapevine geneticsGenetic resourcesGenetic toolsNatural genetic variationhttps://purl.org/becyt/ford/1.6https://purl.org/becyt/ford/1The publication of the genome sequences of inbred grapevine plant PN40024 and the cultivar Pinot Noir has provided a new generation of molecular tools and has opened the way to functional genomics in grapevine. Establishing gene biological function is now a major challenge requiring the parallel development of molecular and genetic information. New massive pyrosequencing technologies will ensure no shortage of nucleotide sequence information. However, genetic analysis and genetic tools in grapevine still require additional development. Exploiting the existing natural genetic variation in Vitis vinifera L. and other inter-fertile Vitis species should be a priority to focus functional analyses on genes contributing to phenotypic variation because their genetic variation constitutes the basis for genetic improvement of classical cultivars and for the development of new ones. In this review, we discussed the current molecular and genetic tools available in grapevine and considered those that need to be developed to exploit natural genetic variation in the analyses of gene function. We also reviewed the scarce information on the genetic and molecular structure of relevant grapevine traits and proposed future directions.Fil: Martínez Zapater, José M.. Consejo Superior de Investigaciones Cientificas. Center For Research In Agricultural Genomics; EspañaFil: Carmona, M. J.. Universidad Politécnica de Madrid; EspañaFil: Diaz Riquelme, J.. Universidad Politécnica de Madrid; EspañaFil: Fernández, L.. Consejo Superior de Investigaciones Cientificas. Center For Research In Agricultural Genomics; EspañaFil: Lijavetzky, Diego Claudio. Consejo Superior de Investigaciones Cientificas. Center For Research In Agricultural Genomics; España. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Mendoza. Instituto de Biología Agrícola de Mendoza. Universidad Nacional de Cuyo. Facultad de Ciencias Agrarias. Instituto de Biología Agrícola de Mendoza; ArgentinaWiley Blackwell Publishing, Inc2010-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/106854Martínez Zapater, José M.; Carmona, M. J.; Diaz Riquelme, J.; Fernández, L.; Lijavetzky, Diego Claudio; Grapevine genetics after the genome sequence: Challenges and limitations; Wiley Blackwell Publishing, Inc; Australian Journal Of Grape And Wine Research; 16; 1; 1-2010; 33-461322-7130CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/doi/10.1111/j.1755-0238.2009.00073.xinfo:eu-repo/semantics/altIdentifier/url/https://onlinelibrary.wiley.com/doi/full/10.1111/j.1755-0238.2009.00073.xinfo:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-sa/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-09-29T10:29:34Zoai:ri.conicet.gov.ar:11336/106854instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-09-29 10:29:34.989CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse
dc.title.none.fl_str_mv Grapevine genetics after the genome sequence: Challenges and limitations
title Grapevine genetics after the genome sequence: Challenges and limitations
spellingShingle Grapevine genetics after the genome sequence: Challenges and limitations
Martínez Zapater, José M.
Grapevine genetics
Genetic resources
Genetic tools
Natural genetic variation
title_short Grapevine genetics after the genome sequence: Challenges and limitations
title_full Grapevine genetics after the genome sequence: Challenges and limitations
title_fullStr Grapevine genetics after the genome sequence: Challenges and limitations
title_full_unstemmed Grapevine genetics after the genome sequence: Challenges and limitations
title_sort Grapevine genetics after the genome sequence: Challenges and limitations
dc.creator.none.fl_str_mv Martínez Zapater, José M.
Carmona, M. J.
Diaz Riquelme, J.
Fernández, L.
Lijavetzky, Diego Claudio
author Martínez Zapater, José M.
author_facet Martínez Zapater, José M.
Carmona, M. J.
Diaz Riquelme, J.
Fernández, L.
Lijavetzky, Diego Claudio
author_role author
author2 Carmona, M. J.
Diaz Riquelme, J.
Fernández, L.
Lijavetzky, Diego Claudio
author2_role author
author
author
author
dc.subject.none.fl_str_mv Grapevine genetics
Genetic resources
Genetic tools
Natural genetic variation
topic Grapevine genetics
Genetic resources
Genetic tools
Natural genetic variation
purl_subject.fl_str_mv https://purl.org/becyt/ford/1.6
https://purl.org/becyt/ford/1
dc.description.none.fl_txt_mv The publication of the genome sequences of inbred grapevine plant PN40024 and the cultivar Pinot Noir has provided a new generation of molecular tools and has opened the way to functional genomics in grapevine. Establishing gene biological function is now a major challenge requiring the parallel development of molecular and genetic information. New massive pyrosequencing technologies will ensure no shortage of nucleotide sequence information. However, genetic analysis and genetic tools in grapevine still require additional development. Exploiting the existing natural genetic variation in Vitis vinifera L. and other inter-fertile Vitis species should be a priority to focus functional analyses on genes contributing to phenotypic variation because their genetic variation constitutes the basis for genetic improvement of classical cultivars and for the development of new ones. In this review, we discussed the current molecular and genetic tools available in grapevine and considered those that need to be developed to exploit natural genetic variation in the analyses of gene function. We also reviewed the scarce information on the genetic and molecular structure of relevant grapevine traits and proposed future directions.
Fil: Martínez Zapater, José M.. Consejo Superior de Investigaciones Cientificas. Center For Research In Agricultural Genomics; España
Fil: Carmona, M. J.. Universidad Politécnica de Madrid; España
Fil: Diaz Riquelme, J.. Universidad Politécnica de Madrid; España
Fil: Fernández, L.. Consejo Superior de Investigaciones Cientificas. Center For Research In Agricultural Genomics; España
Fil: Lijavetzky, Diego Claudio. Consejo Superior de Investigaciones Cientificas. Center For Research In Agricultural Genomics; España. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Mendoza. Instituto de Biología Agrícola de Mendoza. Universidad Nacional de Cuyo. Facultad de Ciencias Agrarias. Instituto de Biología Agrícola de Mendoza; Argentina
description The publication of the genome sequences of inbred grapevine plant PN40024 and the cultivar Pinot Noir has provided a new generation of molecular tools and has opened the way to functional genomics in grapevine. Establishing gene biological function is now a major challenge requiring the parallel development of molecular and genetic information. New massive pyrosequencing technologies will ensure no shortage of nucleotide sequence information. However, genetic analysis and genetic tools in grapevine still require additional development. Exploiting the existing natural genetic variation in Vitis vinifera L. and other inter-fertile Vitis species should be a priority to focus functional analyses on genes contributing to phenotypic variation because their genetic variation constitutes the basis for genetic improvement of classical cultivars and for the development of new ones. In this review, we discussed the current molecular and genetic tools available in grapevine and considered those that need to be developed to exploit natural genetic variation in the analyses of gene function. We also reviewed the scarce information on the genetic and molecular structure of relevant grapevine traits and proposed future directions.
publishDate 2010
dc.date.none.fl_str_mv 2010-01
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/11336/106854
Martínez Zapater, José M.; Carmona, M. J.; Diaz Riquelme, J.; Fernández, L.; Lijavetzky, Diego Claudio; Grapevine genetics after the genome sequence: Challenges and limitations; Wiley Blackwell Publishing, Inc; Australian Journal Of Grape And Wine Research; 16; 1; 1-2010; 33-46
1322-7130
CONICET Digital
CONICET
url http://hdl.handle.net/11336/106854
identifier_str_mv Martínez Zapater, José M.; Carmona, M. J.; Diaz Riquelme, J.; Fernández, L.; Lijavetzky, Diego Claudio; Grapevine genetics after the genome sequence: Challenges and limitations; Wiley Blackwell Publishing, Inc; Australian Journal Of Grape And Wine Research; 16; 1; 1-2010; 33-46
1322-7130
CONICET Digital
CONICET
dc.language.none.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv info:eu-repo/semantics/altIdentifier/doi/10.1111/j.1755-0238.2009.00073.x
info:eu-repo/semantics/altIdentifier/url/https://onlinelibrary.wiley.com/doi/full/10.1111/j.1755-0238.2009.00073.x
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
eu_rights_str_mv openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
dc.format.none.fl_str_mv application/pdf
application/pdf
dc.publisher.none.fl_str_mv Wiley Blackwell Publishing, Inc
publisher.none.fl_str_mv Wiley Blackwell Publishing, Inc
dc.source.none.fl_str_mv reponame:CONICET Digital (CONICET)
instname:Consejo Nacional de Investigaciones Científicas y Técnicas
reponame_str CONICET Digital (CONICET)
collection CONICET Digital (CONICET)
instname_str Consejo Nacional de Investigaciones Científicas y Técnicas
repository.name.fl_str_mv CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas
repository.mail.fl_str_mv dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar
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score 13.070432

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