Oxidized metabolites from cyclopenta-fused polycyclic aromatic hydrocarbons (CP-PAHs). A DFT model study of their carbocations formed by epoxide ring opening
- Autores
- Borosky, Gabriela Leonor; Laali, Kenneth K.
- Año de publicación
- 2010
- Idioma
- inglés
- Tipo de recurso
- artículo
- Estado
- versión publicada
- Descripción
- A density functional theory (DFT) study aimed at understanding structure-reactivity relationships in the oxidized metabolites of cyclopenta-fused polycyclic aromatic hydrocarbons (CP-PAHs) is reported. Epoxidation at various positions was examined in order to identify the most stable epoxide in each class of CP-PAHs. Relative energies of the carbocations resulting from O-protonation and epoxide ring opening were analyzed and compared, taking into account the available biological activity data on these compounds. Geometrical, electronic, and conformational issues were considered. Charge delocalization modes in the resulting carbocations were deduced via the natural population analysis (NPA)-derived changes in charges. Computational results pointed to the importance of the unsaturated cyclopenta ring on the reactivity of these compounds. The reported bioactivity of this highly mutagenic/carcinogenic family of PAHs was observed to parallel their relative carbocation stabilities. A different behavior was observed in crowded non-planar structures possessing a distorted aromatic system. A covalent adduct formed between a CP-PAH epoxide and a purine base was computed inside a DNA fragment employing the ONIOM method.
Fil: Borosky, Gabriela Leonor. University of North Florida; Estados Unidos. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Instituto de Investigaciones en Físico-química de Córdoba. Universidad Nacional de Córdoba. Facultad de Ciencias Químicas. Instituto de Investigaciones en Físico-química de Córdoba; Argentina
Fil: Laali, Kenneth K.. University of North Florida; Estados Unidos - Materia
-
Cyclopenta-Fused Polycyclic Aromatic Hydrocarbons (Cp-Pahs)
Dft Calculations
Oniom Method
Pah Carbocations
Pah-Dna Adducts
Structurereactivity Relationships - Nivel de accesibilidad
- acceso abierto
- Condiciones de uso
- https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
- Repositorio
- Institución
- Consejo Nacional de Investigaciones Científicas y Técnicas
- OAI Identificador
- oai:ri.conicet.gov.ar:11336/71484
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spelling |
Oxidized metabolites from cyclopenta-fused polycyclic aromatic hydrocarbons (CP-PAHs). A DFT model study of their carbocations formed by epoxide ring openingBorosky, Gabriela LeonorLaali, Kenneth K.Cyclopenta-Fused Polycyclic Aromatic Hydrocarbons (Cp-Pahs)Dft CalculationsOniom MethodPah CarbocationsPah-Dna AdductsStructurereactivity Relationshipshttps://purl.org/becyt/ford/1.4https://purl.org/becyt/ford/1A density functional theory (DFT) study aimed at understanding structure-reactivity relationships in the oxidized metabolites of cyclopenta-fused polycyclic aromatic hydrocarbons (CP-PAHs) is reported. Epoxidation at various positions was examined in order to identify the most stable epoxide in each class of CP-PAHs. Relative energies of the carbocations resulting from O-protonation and epoxide ring opening were analyzed and compared, taking into account the available biological activity data on these compounds. Geometrical, electronic, and conformational issues were considered. Charge delocalization modes in the resulting carbocations were deduced via the natural population analysis (NPA)-derived changes in charges. Computational results pointed to the importance of the unsaturated cyclopenta ring on the reactivity of these compounds. The reported bioactivity of this highly mutagenic/carcinogenic family of PAHs was observed to parallel their relative carbocation stabilities. A different behavior was observed in crowded non-planar structures possessing a distorted aromatic system. A covalent adduct formed between a CP-PAH epoxide and a purine base was computed inside a DNA fragment employing the ONIOM method.Fil: Borosky, Gabriela Leonor. University of North Florida; Estados Unidos. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Instituto de Investigaciones en Físico-química de Córdoba. Universidad Nacional de Córdoba. Facultad de Ciencias Químicas. Instituto de Investigaciones en Físico-química de Córdoba; ArgentinaFil: Laali, Kenneth K.. University of North Florida; Estados UnidosJohn Wiley & Sons Ltd2010-03info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/71484Borosky, Gabriela Leonor; Laali, Kenneth K.; Oxidized metabolites from cyclopenta-fused polycyclic aromatic hydrocarbons (CP-PAHs). A DFT model study of their carbocations formed by epoxide ring opening; John Wiley & Sons Ltd; Journal Of Physical Organic Chemistry; 23; 9; 3-2010; 810-8180894-32301099-1395CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/url/https://onlinelibrary.wiley.com/doi/full/10.1002/poc.1666info:eu-repo/semantics/altIdentifier/doi/10.1002/poc.1666info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-sa/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-09-03T09:58:46Zoai:ri.conicet.gov.ar:11336/71484instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-09-03 09:58:46.913CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse |
dc.title.none.fl_str_mv |
Oxidized metabolites from cyclopenta-fused polycyclic aromatic hydrocarbons (CP-PAHs). A DFT model study of their carbocations formed by epoxide ring opening |
title |
Oxidized metabolites from cyclopenta-fused polycyclic aromatic hydrocarbons (CP-PAHs). A DFT model study of their carbocations formed by epoxide ring opening |
spellingShingle |
Oxidized metabolites from cyclopenta-fused polycyclic aromatic hydrocarbons (CP-PAHs). A DFT model study of their carbocations formed by epoxide ring opening Borosky, Gabriela Leonor Cyclopenta-Fused Polycyclic Aromatic Hydrocarbons (Cp-Pahs) Dft Calculations Oniom Method Pah Carbocations Pah-Dna Adducts Structurereactivity Relationships |
title_short |
Oxidized metabolites from cyclopenta-fused polycyclic aromatic hydrocarbons (CP-PAHs). A DFT model study of their carbocations formed by epoxide ring opening |
title_full |
Oxidized metabolites from cyclopenta-fused polycyclic aromatic hydrocarbons (CP-PAHs). A DFT model study of their carbocations formed by epoxide ring opening |
title_fullStr |
Oxidized metabolites from cyclopenta-fused polycyclic aromatic hydrocarbons (CP-PAHs). A DFT model study of their carbocations formed by epoxide ring opening |
title_full_unstemmed |
Oxidized metabolites from cyclopenta-fused polycyclic aromatic hydrocarbons (CP-PAHs). A DFT model study of their carbocations formed by epoxide ring opening |
title_sort |
Oxidized metabolites from cyclopenta-fused polycyclic aromatic hydrocarbons (CP-PAHs). A DFT model study of their carbocations formed by epoxide ring opening |
dc.creator.none.fl_str_mv |
Borosky, Gabriela Leonor Laali, Kenneth K. |
author |
Borosky, Gabriela Leonor |
author_facet |
Borosky, Gabriela Leonor Laali, Kenneth K. |
author_role |
author |
author2 |
Laali, Kenneth K. |
author2_role |
author |
dc.subject.none.fl_str_mv |
Cyclopenta-Fused Polycyclic Aromatic Hydrocarbons (Cp-Pahs) Dft Calculations Oniom Method Pah Carbocations Pah-Dna Adducts Structurereactivity Relationships |
topic |
Cyclopenta-Fused Polycyclic Aromatic Hydrocarbons (Cp-Pahs) Dft Calculations Oniom Method Pah Carbocations Pah-Dna Adducts Structurereactivity Relationships |
purl_subject.fl_str_mv |
https://purl.org/becyt/ford/1.4 https://purl.org/becyt/ford/1 |
dc.description.none.fl_txt_mv |
A density functional theory (DFT) study aimed at understanding structure-reactivity relationships in the oxidized metabolites of cyclopenta-fused polycyclic aromatic hydrocarbons (CP-PAHs) is reported. Epoxidation at various positions was examined in order to identify the most stable epoxide in each class of CP-PAHs. Relative energies of the carbocations resulting from O-protonation and epoxide ring opening were analyzed and compared, taking into account the available biological activity data on these compounds. Geometrical, electronic, and conformational issues were considered. Charge delocalization modes in the resulting carbocations were deduced via the natural population analysis (NPA)-derived changes in charges. Computational results pointed to the importance of the unsaturated cyclopenta ring on the reactivity of these compounds. The reported bioactivity of this highly mutagenic/carcinogenic family of PAHs was observed to parallel their relative carbocation stabilities. A different behavior was observed in crowded non-planar structures possessing a distorted aromatic system. A covalent adduct formed between a CP-PAH epoxide and a purine base was computed inside a DNA fragment employing the ONIOM method. Fil: Borosky, Gabriela Leonor. University of North Florida; Estados Unidos. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Instituto de Investigaciones en Físico-química de Córdoba. Universidad Nacional de Córdoba. Facultad de Ciencias Químicas. Instituto de Investigaciones en Físico-química de Córdoba; Argentina Fil: Laali, Kenneth K.. University of North Florida; Estados Unidos |
description |
A density functional theory (DFT) study aimed at understanding structure-reactivity relationships in the oxidized metabolites of cyclopenta-fused polycyclic aromatic hydrocarbons (CP-PAHs) is reported. Epoxidation at various positions was examined in order to identify the most stable epoxide in each class of CP-PAHs. Relative energies of the carbocations resulting from O-protonation and epoxide ring opening were analyzed and compared, taking into account the available biological activity data on these compounds. Geometrical, electronic, and conformational issues were considered. Charge delocalization modes in the resulting carbocations were deduced via the natural population analysis (NPA)-derived changes in charges. Computational results pointed to the importance of the unsaturated cyclopenta ring on the reactivity of these compounds. The reported bioactivity of this highly mutagenic/carcinogenic family of PAHs was observed to parallel their relative carbocation stabilities. A different behavior was observed in crowded non-planar structures possessing a distorted aromatic system. A covalent adduct formed between a CP-PAH epoxide and a purine base was computed inside a DNA fragment employing the ONIOM method. |
publishDate |
2010 |
dc.date.none.fl_str_mv |
2010-03 |
dc.type.none.fl_str_mv |
info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion http://purl.org/coar/resource_type/c_6501 info:ar-repo/semantics/articulo |
format |
article |
status_str |
publishedVersion |
dc.identifier.none.fl_str_mv |
http://hdl.handle.net/11336/71484 Borosky, Gabriela Leonor; Laali, Kenneth K.; Oxidized metabolites from cyclopenta-fused polycyclic aromatic hydrocarbons (CP-PAHs). A DFT model study of their carbocations formed by epoxide ring opening; John Wiley & Sons Ltd; Journal Of Physical Organic Chemistry; 23; 9; 3-2010; 810-818 0894-3230 1099-1395 CONICET Digital CONICET |
url |
http://hdl.handle.net/11336/71484 |
identifier_str_mv |
Borosky, Gabriela Leonor; Laali, Kenneth K.; Oxidized metabolites from cyclopenta-fused polycyclic aromatic hydrocarbons (CP-PAHs). A DFT model study of their carbocations formed by epoxide ring opening; John Wiley & Sons Ltd; Journal Of Physical Organic Chemistry; 23; 9; 3-2010; 810-818 0894-3230 1099-1395 CONICET Digital CONICET |
dc.language.none.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
info:eu-repo/semantics/altIdentifier/url/https://onlinelibrary.wiley.com/doi/full/10.1002/poc.1666 info:eu-repo/semantics/altIdentifier/doi/10.1002/poc.1666 |
dc.rights.none.fl_str_mv |
info:eu-repo/semantics/openAccess https://creativecommons.org/licenses/by-nc-sa/2.5/ar/ |
eu_rights_str_mv |
openAccess |
rights_invalid_str_mv |
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/ |
dc.format.none.fl_str_mv |
application/pdf application/pdf |
dc.publisher.none.fl_str_mv |
John Wiley & Sons Ltd |
publisher.none.fl_str_mv |
John Wiley & Sons Ltd |
dc.source.none.fl_str_mv |
reponame:CONICET Digital (CONICET) instname:Consejo Nacional de Investigaciones Científicas y Técnicas |
reponame_str |
CONICET Digital (CONICET) |
collection |
CONICET Digital (CONICET) |
instname_str |
Consejo Nacional de Investigaciones Científicas y Técnicas |
repository.name.fl_str_mv |
CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas |
repository.mail.fl_str_mv |
dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar |
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1842269540263657472 |
score |
13.13397 |