Genetic mapping and QTL analysis for peanut smut resistance

Autores
de Blas, Francisco Javier; Bruno, Cecilia Ines; Arias, Renee S.; Ballén Taborda, Carolina; Mamaní, Eva Maria Celia; Oddino, Claudio Marcelo; Rosso, Melina; Costero, Beatriz; Bressano, Marina; Soave, Juan H.; Soave, Sara Josefina; Buteler, Mario I.; Seijo, José Guillermo; Massa, Alicia N.
Año de publicación
2021
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
Background: Peanut smut is a disease caused by the fungus Thecaphora frezii Carranza & Lindquist to which most commercial cultivars in South America are highly susceptible. It is responsible for severely decreased yield and no effective chemical treatment is available to date. However, smut resistance has been identified in wild Arachis species and further transferred to peanut elite cultivars. To identify the genome regions conferring smut resistance within a tetraploid genetic background, this study evaluated a RIL population {susceptible Arachis hypogaea subsp. hypogaea (JS17304-7-B) × resistant synthetic amphidiploid (JS1806) [A. correntina (K 11905) × A. cardenasii (KSSc 36015)] × A. batizocoi (K 9484)4×} segregating for the trait. Results: A SNP based genetic map arranged into 21 linkage groups belonging to the 20 peanut chromosomes was constructed with 1819 markers, spanning a genetic distance of 2531.81 cM. Two consistent quantitative trait loci (QTLs) were identified qSmIA08 and qSmIA02/B02, located on chromosome A08 and A02/B02, respectively. The QTL qSmIA08 at 15.20 cM/5.03 Mbp explained 17.53% of the phenotypic variance, while qSmIA02/B02 at 4.0 cM/3.56 Mbp explained 9.06% of the phenotypic variance. The combined genotypic effects of both QTLs reduced smut incidence by 57% and were stable over the 3 years of evaluation. The genome regions containing the QTLs are rich in genes encoding proteins involved in plant defense, providing new insights into the genetic architecture of peanut smut resistance. Conclusions: A major QTL and a minor QTL identified in this study provide new insights into the genetic architecture of peanut smut resistance that may aid in breeding new varieties resistant to peanut smut.
Fil: de Blas, Francisco Javier. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Instituto Multidisciplinario de Biología Vegetal. Universidad Nacional de Córdoba. Facultad de Ciencias Exactas Físicas y Naturales. Instituto Multidisciplinario de Biología Vegetal; Argentina
Fil: Bruno, Cecilia Ines. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina. Universidad Nacional de Córdoba; Argentina
Fil: Arias, Renee S.. National Peanut Research Laboratory; Estados Unidos
Fil: Ballén Taborda, Carolina. University of Georgia; Estados Unidos
Fil: Mamaní, Eva Maria Celia. Instituto Nacional de Tecnología Agropecuaria; Argentina
Fil: Oddino, Claudio Marcelo. Universidad Nacional de Río Cuarto; Argentina
Fil: Rosso, Melina. No especifíca;
Fil: Costero, Beatriz. Universidad Nacional de Córdoba; Argentina
Fil: Bressano, Marina. Universidad Nacional de Córdoba; Argentina
Fil: Soave, Juan H.. No especifíca;
Fil: Soave, Sara Josefina. No especifíca;
Fil: Buteler, Mario I.. No especifíca;
Fil: Seijo, José Guillermo. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Nordeste. Instituto de Botánica del Nordeste. Universidad Nacional del Nordeste. Facultad de Ciencias Agrarias. Instituto de Botánica del Nordeste; Argentina
Fil: Massa, Alicia N.. National Peanut Research Laboratory; Estados Unidos
Materia
ARACHIS
DISEASE RESISTANCE
GROUNDNUT
INTROGRESSION
PEANUT
PEANUT SMUT
QTL
RIL POPULATION
Nivel de accesibilidad
acceso abierto
Condiciones de uso
https://creativecommons.org/licenses/by/2.5/ar/
Repositorio
CONICET Digital (CONICET)
Institución
Consejo Nacional de Investigaciones Científicas y Técnicas
OAI Identificador
oai:ri.conicet.gov.ar:11336/169217

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network_name_str CONICET Digital (CONICET)
spelling Genetic mapping and QTL analysis for peanut smut resistancede Blas, Francisco JavierBruno, Cecilia InesArias, Renee S.Ballén Taborda, CarolinaMamaní, Eva Maria CeliaOddino, Claudio MarceloRosso, MelinaCostero, BeatrizBressano, MarinaSoave, Juan H.Soave, Sara JosefinaButeler, Mario I.Seijo, José GuillermoMassa, Alicia N.ARACHISDISEASE RESISTANCEGROUNDNUTINTROGRESSIONPEANUTPEANUT SMUTQTLRIL POPULATIONhttps://purl.org/becyt/ford/4.4https://purl.org/becyt/ford/4Background: Peanut smut is a disease caused by the fungus Thecaphora frezii Carranza & Lindquist to which most commercial cultivars in South America are highly susceptible. It is responsible for severely decreased yield and no effective chemical treatment is available to date. However, smut resistance has been identified in wild Arachis species and further transferred to peanut elite cultivars. To identify the genome regions conferring smut resistance within a tetraploid genetic background, this study evaluated a RIL population {susceptible Arachis hypogaea subsp. hypogaea (JS17304-7-B) × resistant synthetic amphidiploid (JS1806) [A. correntina (K 11905) × A. cardenasii (KSSc 36015)] × A. batizocoi (K 9484)4×} segregating for the trait. Results: A SNP based genetic map arranged into 21 linkage groups belonging to the 20 peanut chromosomes was constructed with 1819 markers, spanning a genetic distance of 2531.81 cM. Two consistent quantitative trait loci (QTLs) were identified qSmIA08 and qSmIA02/B02, located on chromosome A08 and A02/B02, respectively. The QTL qSmIA08 at 15.20 cM/5.03 Mbp explained 17.53% of the phenotypic variance, while qSmIA02/B02 at 4.0 cM/3.56 Mbp explained 9.06% of the phenotypic variance. The combined genotypic effects of both QTLs reduced smut incidence by 57% and were stable over the 3 years of evaluation. The genome regions containing the QTLs are rich in genes encoding proteins involved in plant defense, providing new insights into the genetic architecture of peanut smut resistance. Conclusions: A major QTL and a minor QTL identified in this study provide new insights into the genetic architecture of peanut smut resistance that may aid in breeding new varieties resistant to peanut smut.Fil: de Blas, Francisco Javier. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Instituto Multidisciplinario de Biología Vegetal. Universidad Nacional de Córdoba. Facultad de Ciencias Exactas Físicas y Naturales. Instituto Multidisciplinario de Biología Vegetal; ArgentinaFil: Bruno, Cecilia Ines. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina. Universidad Nacional de Córdoba; ArgentinaFil: Arias, Renee S.. National Peanut Research Laboratory; Estados UnidosFil: Ballén Taborda, Carolina. University of Georgia; Estados UnidosFil: Mamaní, Eva Maria Celia. Instituto Nacional de Tecnología Agropecuaria; ArgentinaFil: Oddino, Claudio Marcelo. Universidad Nacional de Río Cuarto; ArgentinaFil: Rosso, Melina. No especifíca;Fil: Costero, Beatriz. Universidad Nacional de Córdoba; ArgentinaFil: Bressano, Marina. Universidad Nacional de Córdoba; ArgentinaFil: Soave, Juan H.. No especifíca;Fil: Soave, Sara Josefina. No especifíca;Fil: Buteler, Mario I.. No especifíca;Fil: Seijo, José Guillermo. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Nordeste. Instituto de Botánica del Nordeste. Universidad Nacional del Nordeste. Facultad de Ciencias Agrarias. Instituto de Botánica del Nordeste; ArgentinaFil: Massa, Alicia N.. National Peanut Research Laboratory; Estados UnidosBioMed Central2021-07info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/169217de Blas, Francisco Javier; Bruno, Cecilia Ines; Arias, Renee S.; Ballén Taborda, Carolina; Mamaní, Eva Maria Celia; et al.; Genetic mapping and QTL analysis for peanut smut resistance; BioMed Central; BMC Plant Biology; 21; 1; 7-2021; 1-151471-2229CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/doi/10.1186/s12870-021-03023-4info:eu-repo/semantics/altIdentifier/url/https://bmcplantbiol.biomedcentral.com/articles/10.1186/s12870-021-03023-4info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-09-03T09:57:28Zoai:ri.conicet.gov.ar:11336/169217instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-09-03 09:57:28.564CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse
dc.title.none.fl_str_mv Genetic mapping and QTL analysis for peanut smut resistance
title Genetic mapping and QTL analysis for peanut smut resistance
spellingShingle Genetic mapping and QTL analysis for peanut smut resistance
de Blas, Francisco Javier
ARACHIS
DISEASE RESISTANCE
GROUNDNUT
INTROGRESSION
PEANUT
PEANUT SMUT
QTL
RIL POPULATION
title_short Genetic mapping and QTL analysis for peanut smut resistance
title_full Genetic mapping and QTL analysis for peanut smut resistance
title_fullStr Genetic mapping and QTL analysis for peanut smut resistance
title_full_unstemmed Genetic mapping and QTL analysis for peanut smut resistance
title_sort Genetic mapping and QTL analysis for peanut smut resistance
dc.creator.none.fl_str_mv de Blas, Francisco Javier
Bruno, Cecilia Ines
Arias, Renee S.
Ballén Taborda, Carolina
Mamaní, Eva Maria Celia
Oddino, Claudio Marcelo
Rosso, Melina
Costero, Beatriz
Bressano, Marina
Soave, Juan H.
Soave, Sara Josefina
Buteler, Mario I.
Seijo, José Guillermo
Massa, Alicia N.
author de Blas, Francisco Javier
author_facet de Blas, Francisco Javier
Bruno, Cecilia Ines
Arias, Renee S.
Ballén Taborda, Carolina
Mamaní, Eva Maria Celia
Oddino, Claudio Marcelo
Rosso, Melina
Costero, Beatriz
Bressano, Marina
Soave, Juan H.
Soave, Sara Josefina
Buteler, Mario I.
Seijo, José Guillermo
Massa, Alicia N.
author_role author
author2 Bruno, Cecilia Ines
Arias, Renee S.
Ballén Taborda, Carolina
Mamaní, Eva Maria Celia
Oddino, Claudio Marcelo
Rosso, Melina
Costero, Beatriz
Bressano, Marina
Soave, Juan H.
Soave, Sara Josefina
Buteler, Mario I.
Seijo, José Guillermo
Massa, Alicia N.
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
dc.subject.none.fl_str_mv ARACHIS
DISEASE RESISTANCE
GROUNDNUT
INTROGRESSION
PEANUT
PEANUT SMUT
QTL
RIL POPULATION
topic ARACHIS
DISEASE RESISTANCE
GROUNDNUT
INTROGRESSION
PEANUT
PEANUT SMUT
QTL
RIL POPULATION
purl_subject.fl_str_mv https://purl.org/becyt/ford/4.4
https://purl.org/becyt/ford/4
dc.description.none.fl_txt_mv Background: Peanut smut is a disease caused by the fungus Thecaphora frezii Carranza & Lindquist to which most commercial cultivars in South America are highly susceptible. It is responsible for severely decreased yield and no effective chemical treatment is available to date. However, smut resistance has been identified in wild Arachis species and further transferred to peanut elite cultivars. To identify the genome regions conferring smut resistance within a tetraploid genetic background, this study evaluated a RIL population {susceptible Arachis hypogaea subsp. hypogaea (JS17304-7-B) × resistant synthetic amphidiploid (JS1806) [A. correntina (K 11905) × A. cardenasii (KSSc 36015)] × A. batizocoi (K 9484)4×} segregating for the trait. Results: A SNP based genetic map arranged into 21 linkage groups belonging to the 20 peanut chromosomes was constructed with 1819 markers, spanning a genetic distance of 2531.81 cM. Two consistent quantitative trait loci (QTLs) were identified qSmIA08 and qSmIA02/B02, located on chromosome A08 and A02/B02, respectively. The QTL qSmIA08 at 15.20 cM/5.03 Mbp explained 17.53% of the phenotypic variance, while qSmIA02/B02 at 4.0 cM/3.56 Mbp explained 9.06% of the phenotypic variance. The combined genotypic effects of both QTLs reduced smut incidence by 57% and were stable over the 3 years of evaluation. The genome regions containing the QTLs are rich in genes encoding proteins involved in plant defense, providing new insights into the genetic architecture of peanut smut resistance. Conclusions: A major QTL and a minor QTL identified in this study provide new insights into the genetic architecture of peanut smut resistance that may aid in breeding new varieties resistant to peanut smut.
Fil: de Blas, Francisco Javier. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Instituto Multidisciplinario de Biología Vegetal. Universidad Nacional de Córdoba. Facultad de Ciencias Exactas Físicas y Naturales. Instituto Multidisciplinario de Biología Vegetal; Argentina
Fil: Bruno, Cecilia Ines. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina. Universidad Nacional de Córdoba; Argentina
Fil: Arias, Renee S.. National Peanut Research Laboratory; Estados Unidos
Fil: Ballén Taborda, Carolina. University of Georgia; Estados Unidos
Fil: Mamaní, Eva Maria Celia. Instituto Nacional de Tecnología Agropecuaria; Argentina
Fil: Oddino, Claudio Marcelo. Universidad Nacional de Río Cuarto; Argentina
Fil: Rosso, Melina. No especifíca;
Fil: Costero, Beatriz. Universidad Nacional de Córdoba; Argentina
Fil: Bressano, Marina. Universidad Nacional de Córdoba; Argentina
Fil: Soave, Juan H.. No especifíca;
Fil: Soave, Sara Josefina. No especifíca;
Fil: Buteler, Mario I.. No especifíca;
Fil: Seijo, José Guillermo. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Nordeste. Instituto de Botánica del Nordeste. Universidad Nacional del Nordeste. Facultad de Ciencias Agrarias. Instituto de Botánica del Nordeste; Argentina
Fil: Massa, Alicia N.. National Peanut Research Laboratory; Estados Unidos
description Background: Peanut smut is a disease caused by the fungus Thecaphora frezii Carranza & Lindquist to which most commercial cultivars in South America are highly susceptible. It is responsible for severely decreased yield and no effective chemical treatment is available to date. However, smut resistance has been identified in wild Arachis species and further transferred to peanut elite cultivars. To identify the genome regions conferring smut resistance within a tetraploid genetic background, this study evaluated a RIL population {susceptible Arachis hypogaea subsp. hypogaea (JS17304-7-B) × resistant synthetic amphidiploid (JS1806) [A. correntina (K 11905) × A. cardenasii (KSSc 36015)] × A. batizocoi (K 9484)4×} segregating for the trait. Results: A SNP based genetic map arranged into 21 linkage groups belonging to the 20 peanut chromosomes was constructed with 1819 markers, spanning a genetic distance of 2531.81 cM. Two consistent quantitative trait loci (QTLs) were identified qSmIA08 and qSmIA02/B02, located on chromosome A08 and A02/B02, respectively. The QTL qSmIA08 at 15.20 cM/5.03 Mbp explained 17.53% of the phenotypic variance, while qSmIA02/B02 at 4.0 cM/3.56 Mbp explained 9.06% of the phenotypic variance. The combined genotypic effects of both QTLs reduced smut incidence by 57% and were stable over the 3 years of evaluation. The genome regions containing the QTLs are rich in genes encoding proteins involved in plant defense, providing new insights into the genetic architecture of peanut smut resistance. Conclusions: A major QTL and a minor QTL identified in this study provide new insights into the genetic architecture of peanut smut resistance that may aid in breeding new varieties resistant to peanut smut.
publishDate 2021
dc.date.none.fl_str_mv 2021-07
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/11336/169217
de Blas, Francisco Javier; Bruno, Cecilia Ines; Arias, Renee S.; Ballén Taborda, Carolina; Mamaní, Eva Maria Celia; et al.; Genetic mapping and QTL analysis for peanut smut resistance; BioMed Central; BMC Plant Biology; 21; 1; 7-2021; 1-15
1471-2229
CONICET Digital
CONICET
url http://hdl.handle.net/11336/169217
identifier_str_mv de Blas, Francisco Javier; Bruno, Cecilia Ines; Arias, Renee S.; Ballén Taborda, Carolina; Mamaní, Eva Maria Celia; et al.; Genetic mapping and QTL analysis for peanut smut resistance; BioMed Central; BMC Plant Biology; 21; 1; 7-2021; 1-15
1471-2229
CONICET Digital
CONICET
dc.language.none.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv info:eu-repo/semantics/altIdentifier/doi/10.1186/s12870-021-03023-4
info:eu-repo/semantics/altIdentifier/url/https://bmcplantbiol.biomedcentral.com/articles/10.1186/s12870-021-03023-4
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
https://creativecommons.org/licenses/by/2.5/ar/
eu_rights_str_mv openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by/2.5/ar/
dc.format.none.fl_str_mv application/pdf
application/pdf
dc.publisher.none.fl_str_mv BioMed Central
publisher.none.fl_str_mv BioMed Central
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instname:Consejo Nacional de Investigaciones Científicas y Técnicas
reponame_str CONICET Digital (CONICET)
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instname_str Consejo Nacional de Investigaciones Científicas y Técnicas
repository.name.fl_str_mv CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas
repository.mail.fl_str_mv dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar
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