Estimation of genetic parameters for height using spatial analysis in Tsuga heterophylla full-sibling family trials in British Columbia
- Autores
- Cappa, Eduardo Pablo; Yanchuk, A. D.; Cartwright, C. V.
- Año de publicación
- 2015
- Idioma
- inglés
- Tipo de recurso
- artículo
- Estado
- versión publicada
- Descripción
- Non-spatial and spatial analyses were carried out to study the effects on genetic parameters in ten-year height growth data across two series of 10 large second-generation full-sib progeny trials of western hemlock [Tsuga heterophylla (Raf.) Sarg.] in British Columbia. To account for different and complex patterns of environmental heterogeneity, spatial single trial analyses were conducted using an individual-tree mixed model with a two-dimensional smoothing surface with tensor product of B-spline bases. The spatial single trial analysis, in all cases, showed sizeable lower Deviance Information Criterion values relative to the non-spatial analysis. Also, fitting a surface displayed a consistent reduction in the posterior mean as well as a decrease in the standard deviations of error variance, no appreciable changes in the additive variance, an increase of individual narrow-sense heritability, and accuracy of breeding values. The tensor product of cubic basis functions of B-spline based on a mixed model framework does provide a useful new alternative to model different and complex patterns of spatial variability within sites in forest genetic trials. Individual narrow-sense heritabilities estimates from the spatial single trial analyses were low (average of 0.06), but typical of this species. Estimated dominance relative to additive variances were unstable across sites (from 0.00 to 1.59). The implications of these estimations will be discussed with respect to the western hemlock genetic improvement program in British Columbia.
Fil: Cappa, Eduardo Pablo. British Columbia Ministry of Forests and Range; Canadá. University of British Columbia; Canadá. Instituto Nacional de Tecnología Agropecuaria. Centro de Investigación de Recursos Naturales. Instituto de Recursos Biológicos; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina
Fil: Yanchuk, A. D.. British Columbia Ministry of Forests and Range; Canadá
Fil: Cartwright, C. V.. British Columbia Ministry of Forests and Range; Canadá - Materia
-
TSUGA HETEROPHYLLA
NON-SPATIAL AND SPATIAL SINGLE TRIAL ANALYSIS
SPATIAL MULTI-ENVIRONMENT TRIAL ANALYSES
HERITABILITY and GENOTYPE BY ENVIRONMENTAL INTERACTIONS - Nivel de accesibilidad
- acceso abierto
- Condiciones de uso
- https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
- Repositorio
.jpg)
- Institución
- Consejo Nacional de Investigaciones Científicas y Técnicas
- OAI Identificador
- oai:ri.conicet.gov.ar:11336/42327
Ver los metadatos del registro completo
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Estimation of genetic parameters for height using spatial analysis in Tsuga heterophylla full-sibling family trials in British ColumbiaCappa, Eduardo PabloYanchuk, A. D.Cartwright, C. V.TSUGA HETEROPHYLLANON-SPATIAL AND SPATIAL SINGLE TRIAL ANALYSISSPATIAL MULTI-ENVIRONMENT TRIAL ANALYSESHERITABILITY and GENOTYPE BY ENVIRONMENTAL INTERACTIONShttps://purl.org/becyt/ford/1.6https://purl.org/becyt/ford/1Non-spatial and spatial analyses were carried out to study the effects on genetic parameters in ten-year height growth data across two series of 10 large second-generation full-sib progeny trials of western hemlock [Tsuga heterophylla (Raf.) Sarg.] in British Columbia. To account for different and complex patterns of environmental heterogeneity, spatial single trial analyses were conducted using an individual-tree mixed model with a two-dimensional smoothing surface with tensor product of B-spline bases. The spatial single trial analysis, in all cases, showed sizeable lower Deviance Information Criterion values relative to the non-spatial analysis. Also, fitting a surface displayed a consistent reduction in the posterior mean as well as a decrease in the standard deviations of error variance, no appreciable changes in the additive variance, an increase of individual narrow-sense heritability, and accuracy of breeding values. The tensor product of cubic basis functions of B-spline based on a mixed model framework does provide a useful new alternative to model different and complex patterns of spatial variability within sites in forest genetic trials. Individual narrow-sense heritabilities estimates from the spatial single trial analyses were low (average of 0.06), but typical of this species. Estimated dominance relative to additive variances were unstable across sites (from 0.00 to 1.59). The implications of these estimations will be discussed with respect to the western hemlock genetic improvement program in British Columbia.Fil: Cappa, Eduardo Pablo. British Columbia Ministry of Forests and Range; Canadá. University of British Columbia; Canadá. Instituto Nacional de Tecnología Agropecuaria. Centro de Investigación de Recursos Naturales. Instituto de Recursos Biológicos; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; ArgentinaFil: Yanchuk, A. D.. British Columbia Ministry of Forests and Range; CanadáFil: Cartwright, C. V.. British Columbia Ministry of Forests and Range; CanadáDe Gruyter2015-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/42327Cappa, Eduardo Pablo; Yanchuk, A. D.; Cartwright, C. V.; Estimation of genetic parameters for height using spatial analysis in Tsuga heterophylla full-sibling family trials in British Columbia; De Gruyter; Silvae Genetica; 64; 1-6; 1-2015; 59-732509-8934CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/doi/10.1515/sg-2015-0005info:eu-repo/semantics/altIdentifier/url/https://www.degruyter.com/view/j/sg.2015.64.issue-1-6/sg-2015-0005/sg-2015-0005.xmlinfo:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-sa/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-10-22T11:20:18Zoai:ri.conicet.gov.ar:11336/42327instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-10-22 11:20:18.6CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse |
| dc.title.none.fl_str_mv |
Estimation of genetic parameters for height using spatial analysis in Tsuga heterophylla full-sibling family trials in British Columbia |
| title |
Estimation of genetic parameters for height using spatial analysis in Tsuga heterophylla full-sibling family trials in British Columbia |
| spellingShingle |
Estimation of genetic parameters for height using spatial analysis in Tsuga heterophylla full-sibling family trials in British Columbia Cappa, Eduardo Pablo TSUGA HETEROPHYLLA NON-SPATIAL AND SPATIAL SINGLE TRIAL ANALYSIS SPATIAL MULTI-ENVIRONMENT TRIAL ANALYSES HERITABILITY and GENOTYPE BY ENVIRONMENTAL INTERACTIONS |
| title_short |
Estimation of genetic parameters for height using spatial analysis in Tsuga heterophylla full-sibling family trials in British Columbia |
| title_full |
Estimation of genetic parameters for height using spatial analysis in Tsuga heterophylla full-sibling family trials in British Columbia |
| title_fullStr |
Estimation of genetic parameters for height using spatial analysis in Tsuga heterophylla full-sibling family trials in British Columbia |
| title_full_unstemmed |
Estimation of genetic parameters for height using spatial analysis in Tsuga heterophylla full-sibling family trials in British Columbia |
| title_sort |
Estimation of genetic parameters for height using spatial analysis in Tsuga heterophylla full-sibling family trials in British Columbia |
| dc.creator.none.fl_str_mv |
Cappa, Eduardo Pablo Yanchuk, A. D. Cartwright, C. V. |
| author |
Cappa, Eduardo Pablo |
| author_facet |
Cappa, Eduardo Pablo Yanchuk, A. D. Cartwright, C. V. |
| author_role |
author |
| author2 |
Yanchuk, A. D. Cartwright, C. V. |
| author2_role |
author author |
| dc.subject.none.fl_str_mv |
TSUGA HETEROPHYLLA NON-SPATIAL AND SPATIAL SINGLE TRIAL ANALYSIS SPATIAL MULTI-ENVIRONMENT TRIAL ANALYSES HERITABILITY and GENOTYPE BY ENVIRONMENTAL INTERACTIONS |
| topic |
TSUGA HETEROPHYLLA NON-SPATIAL AND SPATIAL SINGLE TRIAL ANALYSIS SPATIAL MULTI-ENVIRONMENT TRIAL ANALYSES HERITABILITY and GENOTYPE BY ENVIRONMENTAL INTERACTIONS |
| purl_subject.fl_str_mv |
https://purl.org/becyt/ford/1.6 https://purl.org/becyt/ford/1 |
| dc.description.none.fl_txt_mv |
Non-spatial and spatial analyses were carried out to study the effects on genetic parameters in ten-year height growth data across two series of 10 large second-generation full-sib progeny trials of western hemlock [Tsuga heterophylla (Raf.) Sarg.] in British Columbia. To account for different and complex patterns of environmental heterogeneity, spatial single trial analyses were conducted using an individual-tree mixed model with a two-dimensional smoothing surface with tensor product of B-spline bases. The spatial single trial analysis, in all cases, showed sizeable lower Deviance Information Criterion values relative to the non-spatial analysis. Also, fitting a surface displayed a consistent reduction in the posterior mean as well as a decrease in the standard deviations of error variance, no appreciable changes in the additive variance, an increase of individual narrow-sense heritability, and accuracy of breeding values. The tensor product of cubic basis functions of B-spline based on a mixed model framework does provide a useful new alternative to model different and complex patterns of spatial variability within sites in forest genetic trials. Individual narrow-sense heritabilities estimates from the spatial single trial analyses were low (average of 0.06), but typical of this species. Estimated dominance relative to additive variances were unstable across sites (from 0.00 to 1.59). The implications of these estimations will be discussed with respect to the western hemlock genetic improvement program in British Columbia. Fil: Cappa, Eduardo Pablo. British Columbia Ministry of Forests and Range; Canadá. University of British Columbia; Canadá. Instituto Nacional de Tecnología Agropecuaria. Centro de Investigación de Recursos Naturales. Instituto de Recursos Biológicos; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina Fil: Yanchuk, A. D.. British Columbia Ministry of Forests and Range; Canadá Fil: Cartwright, C. V.. British Columbia Ministry of Forests and Range; Canadá |
| description |
Non-spatial and spatial analyses were carried out to study the effects on genetic parameters in ten-year height growth data across two series of 10 large second-generation full-sib progeny trials of western hemlock [Tsuga heterophylla (Raf.) Sarg.] in British Columbia. To account for different and complex patterns of environmental heterogeneity, spatial single trial analyses were conducted using an individual-tree mixed model with a two-dimensional smoothing surface with tensor product of B-spline bases. The spatial single trial analysis, in all cases, showed sizeable lower Deviance Information Criterion values relative to the non-spatial analysis. Also, fitting a surface displayed a consistent reduction in the posterior mean as well as a decrease in the standard deviations of error variance, no appreciable changes in the additive variance, an increase of individual narrow-sense heritability, and accuracy of breeding values. The tensor product of cubic basis functions of B-spline based on a mixed model framework does provide a useful new alternative to model different and complex patterns of spatial variability within sites in forest genetic trials. Individual narrow-sense heritabilities estimates from the spatial single trial analyses were low (average of 0.06), but typical of this species. Estimated dominance relative to additive variances were unstable across sites (from 0.00 to 1.59). The implications of these estimations will be discussed with respect to the western hemlock genetic improvement program in British Columbia. |
| publishDate |
2015 |
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2015-01 |
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info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion http://purl.org/coar/resource_type/c_6501 info:ar-repo/semantics/articulo |
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article |
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publishedVersion |
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http://hdl.handle.net/11336/42327 Cappa, Eduardo Pablo; Yanchuk, A. D.; Cartwright, C. V.; Estimation of genetic parameters for height using spatial analysis in Tsuga heterophylla full-sibling family trials in British Columbia; De Gruyter; Silvae Genetica; 64; 1-6; 1-2015; 59-73 2509-8934 CONICET Digital CONICET |
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http://hdl.handle.net/11336/42327 |
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Cappa, Eduardo Pablo; Yanchuk, A. D.; Cartwright, C. V.; Estimation of genetic parameters for height using spatial analysis in Tsuga heterophylla full-sibling family trials in British Columbia; De Gruyter; Silvae Genetica; 64; 1-6; 1-2015; 59-73 2509-8934 CONICET Digital CONICET |
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eng |
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eng |
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De Gruyter |
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CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas |
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