Phylogeny of the Andean genus Deprea (Physalideae, Solanaceae): testing the generic circumscription

Autores
Carrizo Garcia, Carolina; Wahlert, Greg; Orozco, Clara Inés; Barboza, Gloria Estela; Bohs, Lynn
Año de publicación
2015
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
Deprea (Solanaceae) is a small South American genus of 10 species occurring in Andean areas from Venezuela to Bolivia. The circumscription of Deprea has been repeatedly modified in recent years, with new species being described and others transferred into or out of the genus. The relationships of Deprea to other genera of Solanaceae are still poorly understood, although it seems to be closely related to Larnax. A phylogenetic analysis was performed to test the monophyly of Deprea. Sequences from three molecular markers (nuclear ITS and waxy and chloroplast psbA-trnH) were analyzed by parsimony and Bayesian methods. All the species of Deprea and Larnax sampled were intermixed in a strongly supported clade in the consensus trees, and therefore the currently recognized Deprea species do not form a monophyletic group. At least four strongly supported clades could be recovered within the Deprea + Larnax assemblage, but the affinities of several species of both genera remained unresolved. Additional sampling including the majority of the Deprea + Larnax species and more representatives of genera in the Physalideae should be done to clarify relationships within the clade and to pinpoint the closest relatives of Deprea + Larnax.
Fil: Carrizo Garcia, Carolina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Córdoba. Instituto Multidisciplinario de Biología Vegetal (p); Argentina
Fil: Wahlert, Greg. University of Utah. Department of Biology; Estados Unidos
Fil: Orozco, Clara Inés. Universidad Nacional de Colombia. Instituto de Ciencias Naturales; Colombia
Fil: Barboza, Gloria Estela. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Córdoba. Instituto Multidisciplinario de Biología Vegetal (p); Argentina. Universidad Nacional de Córdoba. Facultad de Ciencias Químicas; Argentina
Fil: Bohs, Lynn. University of Utah. Department of Biology; Colombia
Materia
Larnax
Its
Psba-Trnh
Waxy
Nivel de accesibilidad
acceso abierto
Condiciones de uso
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
Repositorio
CONICET Digital (CONICET)
Institución
Consejo Nacional de Investigaciones Científicas y Técnicas
OAI Identificador
oai:ri.conicet.gov.ar:11336/15295
Acceder
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network_name_str CONICET Digital (CONICET)
spelling Phylogeny of the Andean genus Deprea (Physalideae, Solanaceae): testing the generic circumscriptionCarrizo Garcia, CarolinaWahlert, GregOrozco, Clara InésBarboza, Gloria EstelaBohs, LynnLarnaxItsPsba-TrnhWaxyhttps://purl.org/becyt/ford/1.6https://purl.org/becyt/ford/1Deprea (Solanaceae) is a small South American genus of 10 species occurring in Andean areas from Venezuela to Bolivia. The circumscription of Deprea has been repeatedly modified in recent years, with new species being described and others transferred into or out of the genus. The relationships of Deprea to other genera of Solanaceae are still poorly understood, although it seems to be closely related to Larnax. A phylogenetic analysis was performed to test the monophyly of Deprea. Sequences from three molecular markers (nuclear ITS and waxy and chloroplast psbA-trnH) were analyzed by parsimony and Bayesian methods. All the species of Deprea and Larnax sampled were intermixed in a strongly supported clade in the consensus trees, and therefore the currently recognized Deprea species do not form a monophyletic group. At least four strongly supported clades could be recovered within the Deprea + Larnax assemblage, but the affinities of several species of both genera remained unresolved. Additional sampling including the majority of the Deprea + Larnax species and more representatives of genera in the Physalideae should be done to clarify relationships within the clade and to pinpoint the closest relatives of Deprea + Larnax.Fil: Carrizo Garcia, Carolina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Córdoba. Instituto Multidisciplinario de Biología Vegetal (p); ArgentinaFil: Wahlert, Greg. University of Utah. Department of Biology; Estados UnidosFil: Orozco, Clara Inés. Universidad Nacional de Colombia. Instituto de Ciencias Naturales; ColombiaFil: Barboza, Gloria Estela. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Córdoba. Instituto Multidisciplinario de Biología Vegetal (p); Argentina. Universidad Nacional de Córdoba. Facultad de Ciencias Químicas; ArgentinaFil: Bohs, Lynn. University of Utah. Department of Biology; ColombiaMagnolia Press2015-12info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/15295Carrizo Garcia, Carolina; Wahlert, Greg; Orozco, Clara Inés; Barboza, Gloria Estela; Bohs, Lynn; Phylogeny of the Andean genus Deprea (Physalideae, Solanaceae): testing the generic circumscription; Magnolia Press; Phytotaxa; 238; 1; 12-2015; 71-811179-31551179-3163enginfo:eu-repo/semantics/altIdentifier/url/http://biotaxa.org/Phytotaxa/article/view/phytotaxa.238.1.3info:eu-repo/semantics/altIdentifier/url/http://dx.doi.org/10.11646/phytotaxa.238.1.3info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-sa/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-10-15T14:57:12Zoai:ri.conicet.gov.ar:11336/15295instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-10-15 14:57:12.942CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse
dc.title.none.fl_str_mv Phylogeny of the Andean genus Deprea (Physalideae, Solanaceae): testing the generic circumscription
title Phylogeny of the Andean genus Deprea (Physalideae, Solanaceae): testing the generic circumscription
spellingShingle Phylogeny of the Andean genus Deprea (Physalideae, Solanaceae): testing the generic circumscription
Carrizo Garcia, Carolina
Larnax
Its
Psba-Trnh
Waxy
title_short Phylogeny of the Andean genus Deprea (Physalideae, Solanaceae): testing the generic circumscription
title_full Phylogeny of the Andean genus Deprea (Physalideae, Solanaceae): testing the generic circumscription
title_fullStr Phylogeny of the Andean genus Deprea (Physalideae, Solanaceae): testing the generic circumscription
title_full_unstemmed Phylogeny of the Andean genus Deprea (Physalideae, Solanaceae): testing the generic circumscription
title_sort Phylogeny of the Andean genus Deprea (Physalideae, Solanaceae): testing the generic circumscription
dc.creator.none.fl_str_mv Carrizo Garcia, Carolina
Wahlert, Greg
Orozco, Clara Inés
Barboza, Gloria Estela
Bohs, Lynn
author Carrizo Garcia, Carolina
author_facet Carrizo Garcia, Carolina
Wahlert, Greg
Orozco, Clara Inés
Barboza, Gloria Estela
Bohs, Lynn
author_role author
author2 Wahlert, Greg
Orozco, Clara Inés
Barboza, Gloria Estela
Bohs, Lynn
author2_role author
author
author
author
dc.subject.none.fl_str_mv Larnax
Its
Psba-Trnh
Waxy
topic Larnax
Its
Psba-Trnh
Waxy
purl_subject.fl_str_mv https://purl.org/becyt/ford/1.6
https://purl.org/becyt/ford/1
dc.description.none.fl_txt_mv Deprea (Solanaceae) is a small South American genus of 10 species occurring in Andean areas from Venezuela to Bolivia. The circumscription of Deprea has been repeatedly modified in recent years, with new species being described and others transferred into or out of the genus. The relationships of Deprea to other genera of Solanaceae are still poorly understood, although it seems to be closely related to Larnax. A phylogenetic analysis was performed to test the monophyly of Deprea. Sequences from three molecular markers (nuclear ITS and waxy and chloroplast psbA-trnH) were analyzed by parsimony and Bayesian methods. All the species of Deprea and Larnax sampled were intermixed in a strongly supported clade in the consensus trees, and therefore the currently recognized Deprea species do not form a monophyletic group. At least four strongly supported clades could be recovered within the Deprea + Larnax assemblage, but the affinities of several species of both genera remained unresolved. Additional sampling including the majority of the Deprea + Larnax species and more representatives of genera in the Physalideae should be done to clarify relationships within the clade and to pinpoint the closest relatives of Deprea + Larnax.
Fil: Carrizo Garcia, Carolina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Córdoba. Instituto Multidisciplinario de Biología Vegetal (p); Argentina
Fil: Wahlert, Greg. University of Utah. Department of Biology; Estados Unidos
Fil: Orozco, Clara Inés. Universidad Nacional de Colombia. Instituto de Ciencias Naturales; Colombia
Fil: Barboza, Gloria Estela. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Córdoba. Instituto Multidisciplinario de Biología Vegetal (p); Argentina. Universidad Nacional de Córdoba. Facultad de Ciencias Químicas; Argentina
Fil: Bohs, Lynn. University of Utah. Department of Biology; Colombia
description Deprea (Solanaceae) is a small South American genus of 10 species occurring in Andean areas from Venezuela to Bolivia. The circumscription of Deprea has been repeatedly modified in recent years, with new species being described and others transferred into or out of the genus. The relationships of Deprea to other genera of Solanaceae are still poorly understood, although it seems to be closely related to Larnax. A phylogenetic analysis was performed to test the monophyly of Deprea. Sequences from three molecular markers (nuclear ITS and waxy and chloroplast psbA-trnH) were analyzed by parsimony and Bayesian methods. All the species of Deprea and Larnax sampled were intermixed in a strongly supported clade in the consensus trees, and therefore the currently recognized Deprea species do not form a monophyletic group. At least four strongly supported clades could be recovered within the Deprea + Larnax assemblage, but the affinities of several species of both genera remained unresolved. Additional sampling including the majority of the Deprea + Larnax species and more representatives of genera in the Physalideae should be done to clarify relationships within the clade and to pinpoint the closest relatives of Deprea + Larnax.
publishDate 2015
dc.date.none.fl_str_mv 2015-12
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/11336/15295
Carrizo Garcia, Carolina; Wahlert, Greg; Orozco, Clara Inés; Barboza, Gloria Estela; Bohs, Lynn; Phylogeny of the Andean genus Deprea (Physalideae, Solanaceae): testing the generic circumscription; Magnolia Press; Phytotaxa; 238; 1; 12-2015; 71-81
1179-3155
1179-3163
url http://hdl.handle.net/11336/15295
identifier_str_mv Carrizo Garcia, Carolina; Wahlert, Greg; Orozco, Clara Inés; Barboza, Gloria Estela; Bohs, Lynn; Phylogeny of the Andean genus Deprea (Physalideae, Solanaceae): testing the generic circumscription; Magnolia Press; Phytotaxa; 238; 1; 12-2015; 71-81
1179-3155
1179-3163
dc.language.none.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv info:eu-repo/semantics/altIdentifier/url/http://biotaxa.org/Phytotaxa/article/view/phytotaxa.238.1.3
info:eu-repo/semantics/altIdentifier/url/http://dx.doi.org/10.11646/phytotaxa.238.1.3
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
eu_rights_str_mv openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
dc.format.none.fl_str_mv application/pdf
application/pdf
dc.publisher.none.fl_str_mv Magnolia Press
publisher.none.fl_str_mv Magnolia Press
dc.source.none.fl_str_mv reponame:CONICET Digital (CONICET)
instname:Consejo Nacional de Investigaciones Científicas y Técnicas
reponame_str CONICET Digital (CONICET)
collection CONICET Digital (CONICET)
instname_str Consejo Nacional de Investigaciones Científicas y Técnicas
repository.name.fl_str_mv CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas
repository.mail.fl_str_mv dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar
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score 13.22299

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