Phylogenetic analysis of 73 060 taxa corroborates major eukaryotic groups

Autores
Goloboff, Pablo Augusto; Catalano, Santiago Andres; Mirande, Juan Marcos; Szumik, Claudia Adriana; Arias, J. Salvador; Källersjö, Mari; Farris, James S.
Año de publicación
2009
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
Obtaining a well supported schema of phylogenetic relationships among the major groups of living organisms requires considering as much taxonomic diversity as possible, but the computational cost of calculating large phylogenies has so far been a major obstacle. We show here that the parsimony algorithms implemented in TNT can successfully process the largest phylogenetic data set ever analysed, consisting of molecular sequences and morphology for 73 060 eukaryotic taxa. The trees resulting from molecules alone display a high degree of congruence with the major taxonomic groups, with a small proportion of misplaced species; the combined data set retrieves these groups with even higher congruence. This shows that tree-calculation algorithms effectively retrieve phylogenetic history for very large data sets, and at the same time provides strong corroboration for the major eukaryotic lineages long recognized by taxonomists.
Fil: Goloboff, Pablo Augusto. Universidad Nacional de Tucumán. Facultad de Ciencias Naturales e Instituto Miguel Lillo. Instituto Superior de Entomología; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico - Tucumán. Unidad Ejecutora Lillo; Argentina
Fil: Catalano, Santiago Andres. Universidad Nacional de Tucumán. Facultad de Ciencias Naturales e Instituto Miguel Lillo. Instituto Superior de Entomología; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico - Tucumán. Unidad Ejecutora Lillo; Argentina
Fil: Mirande, Juan Marcos. Fundación Miguel Lillo; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico - Tucumán. Unidad Ejecutora Lillo; Argentina
Fil: Szumik, Claudia Adriana. Universidad Nacional de Tucumán. Facultad de Ciencias Naturales e Instituto Miguel Lillo. Instituto Superior de Entomología; Argentina
Fil: Arias, J. Salvador. Universidad Nacional de Tucumán. Facultad de Ciencias Naturales e Instituto Miguel Lillo. Instituto Superior de Entomología; Argentina
Fil: Källersjö, Mari. Göteborgs Botaniska Trädgård; Suecia
Fil: Farris, James S.. Molekylärsystematiska laboratoriet; Suecia
Materia
Phylogenetics
Systematics
Taxonomy
Eukarya
Nivel de accesibilidad
acceso abierto
Condiciones de uso
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
Repositorio
CONICET Digital (CONICET)
Institución
Consejo Nacional de Investigaciones Científicas y Técnicas
OAI Identificador
oai:ri.conicet.gov.ar:11336/78055
Acceder
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spelling Phylogenetic analysis of 73 060 taxa corroborates major eukaryotic groupsGoloboff, Pablo AugustoCatalano, Santiago AndresMirande, Juan MarcosSzumik, Claudia AdrianaArias, J. SalvadorKällersjö, MariFarris, James S.PhylogeneticsSystematicsTaxonomyEukaryahttps://purl.org/becyt/ford/1.6https://purl.org/becyt/ford/1Obtaining a well supported schema of phylogenetic relationships among the major groups of living organisms requires considering as much taxonomic diversity as possible, but the computational cost of calculating large phylogenies has so far been a major obstacle. We show here that the parsimony algorithms implemented in TNT can successfully process the largest phylogenetic data set ever analysed, consisting of molecular sequences and morphology for 73 060 eukaryotic taxa. The trees resulting from molecules alone display a high degree of congruence with the major taxonomic groups, with a small proportion of misplaced species; the combined data set retrieves these groups with even higher congruence. This shows that tree-calculation algorithms effectively retrieve phylogenetic history for very large data sets, and at the same time provides strong corroboration for the major eukaryotic lineages long recognized by taxonomists.Fil: Goloboff, Pablo Augusto. Universidad Nacional de Tucumán. Facultad de Ciencias Naturales e Instituto Miguel Lillo. Instituto Superior de Entomología; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico - Tucumán. Unidad Ejecutora Lillo; ArgentinaFil: Catalano, Santiago Andres. Universidad Nacional de Tucumán. Facultad de Ciencias Naturales e Instituto Miguel Lillo. Instituto Superior de Entomología; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico - Tucumán. Unidad Ejecutora Lillo; ArgentinaFil: Mirande, Juan Marcos. Fundación Miguel Lillo; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico - Tucumán. Unidad Ejecutora Lillo; ArgentinaFil: Szumik, Claudia Adriana. Universidad Nacional de Tucumán. Facultad de Ciencias Naturales e Instituto Miguel Lillo. Instituto Superior de Entomología; ArgentinaFil: Arias, J. Salvador. Universidad Nacional de Tucumán. Facultad de Ciencias Naturales e Instituto Miguel Lillo. Instituto Superior de Entomología; ArgentinaFil: Källersjö, Mari. Göteborgs Botaniska Trädgård; SueciaFil: Farris, James S.. Molekylärsystematiska laboratoriet; SueciaWiley Blackwell Publishing, Inc2009-06info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfapplication/pdfapplication/pdfapplication/pdfapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/78055Goloboff, Pablo Augusto; Catalano, Santiago Andres; Mirande, Juan Marcos; Szumik, Claudia Adriana; Arias, J. Salvador; et al.; Phylogenetic analysis of 73 060 taxa corroborates major eukaryotic groups; Wiley Blackwell Publishing, Inc; Cladistics; 25; 3; 6-2009; 211-2300748-3007CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/doi/10.1111/j.1096-0031.2009.00255.xinfo:eu-repo/semantics/altIdentifier/url/https://onlinelibrary.wiley.com/doi/full/10.1111/j.1096-0031.2009.00255.xinfo:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-sa/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-09-03T10:04:31Zoai:ri.conicet.gov.ar:11336/78055instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-09-03 10:04:31.403CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse
dc.title.none.fl_str_mv Phylogenetic analysis of 73 060 taxa corroborates major eukaryotic groups
title Phylogenetic analysis of 73 060 taxa corroborates major eukaryotic groups
spellingShingle Phylogenetic analysis of 73 060 taxa corroborates major eukaryotic groups
Goloboff, Pablo Augusto
Phylogenetics
Systematics
Taxonomy
Eukarya
title_short Phylogenetic analysis of 73 060 taxa corroborates major eukaryotic groups
title_full Phylogenetic analysis of 73 060 taxa corroborates major eukaryotic groups
title_fullStr Phylogenetic analysis of 73 060 taxa corroborates major eukaryotic groups
title_full_unstemmed Phylogenetic analysis of 73 060 taxa corroborates major eukaryotic groups
title_sort Phylogenetic analysis of 73 060 taxa corroborates major eukaryotic groups
dc.creator.none.fl_str_mv Goloboff, Pablo Augusto
Catalano, Santiago Andres
Mirande, Juan Marcos
Szumik, Claudia Adriana
Arias, J. Salvador
Källersjö, Mari
Farris, James S.
author Goloboff, Pablo Augusto
author_facet Goloboff, Pablo Augusto
Catalano, Santiago Andres
Mirande, Juan Marcos
Szumik, Claudia Adriana
Arias, J. Salvador
Källersjö, Mari
Farris, James S.
author_role author
author2 Catalano, Santiago Andres
Mirande, Juan Marcos
Szumik, Claudia Adriana
Arias, J. Salvador
Källersjö, Mari
Farris, James S.
author2_role author
author
author
author
author
author
dc.subject.none.fl_str_mv Phylogenetics
Systematics
Taxonomy
Eukarya
topic Phylogenetics
Systematics
Taxonomy
Eukarya
purl_subject.fl_str_mv https://purl.org/becyt/ford/1.6
https://purl.org/becyt/ford/1
dc.description.none.fl_txt_mv Obtaining a well supported schema of phylogenetic relationships among the major groups of living organisms requires considering as much taxonomic diversity as possible, but the computational cost of calculating large phylogenies has so far been a major obstacle. We show here that the parsimony algorithms implemented in TNT can successfully process the largest phylogenetic data set ever analysed, consisting of molecular sequences and morphology for 73 060 eukaryotic taxa. The trees resulting from molecules alone display a high degree of congruence with the major taxonomic groups, with a small proportion of misplaced species; the combined data set retrieves these groups with even higher congruence. This shows that tree-calculation algorithms effectively retrieve phylogenetic history for very large data sets, and at the same time provides strong corroboration for the major eukaryotic lineages long recognized by taxonomists.
Fil: Goloboff, Pablo Augusto. Universidad Nacional de Tucumán. Facultad de Ciencias Naturales e Instituto Miguel Lillo. Instituto Superior de Entomología; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico - Tucumán. Unidad Ejecutora Lillo; Argentina
Fil: Catalano, Santiago Andres. Universidad Nacional de Tucumán. Facultad de Ciencias Naturales e Instituto Miguel Lillo. Instituto Superior de Entomología; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico - Tucumán. Unidad Ejecutora Lillo; Argentina
Fil: Mirande, Juan Marcos. Fundación Miguel Lillo; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico - Tucumán. Unidad Ejecutora Lillo; Argentina
Fil: Szumik, Claudia Adriana. Universidad Nacional de Tucumán. Facultad de Ciencias Naturales e Instituto Miguel Lillo. Instituto Superior de Entomología; Argentina
Fil: Arias, J. Salvador. Universidad Nacional de Tucumán. Facultad de Ciencias Naturales e Instituto Miguel Lillo. Instituto Superior de Entomología; Argentina
Fil: Källersjö, Mari. Göteborgs Botaniska Trädgård; Suecia
Fil: Farris, James S.. Molekylärsystematiska laboratoriet; Suecia
description Obtaining a well supported schema of phylogenetic relationships among the major groups of living organisms requires considering as much taxonomic diversity as possible, but the computational cost of calculating large phylogenies has so far been a major obstacle. We show here that the parsimony algorithms implemented in TNT can successfully process the largest phylogenetic data set ever analysed, consisting of molecular sequences and morphology for 73 060 eukaryotic taxa. The trees resulting from molecules alone display a high degree of congruence with the major taxonomic groups, with a small proportion of misplaced species; the combined data set retrieves these groups with even higher congruence. This shows that tree-calculation algorithms effectively retrieve phylogenetic history for very large data sets, and at the same time provides strong corroboration for the major eukaryotic lineages long recognized by taxonomists.
publishDate 2009
dc.date.none.fl_str_mv 2009-06
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/11336/78055
Goloboff, Pablo Augusto; Catalano, Santiago Andres; Mirande, Juan Marcos; Szumik, Claudia Adriana; Arias, J. Salvador; et al.; Phylogenetic analysis of 73 060 taxa corroborates major eukaryotic groups; Wiley Blackwell Publishing, Inc; Cladistics; 25; 3; 6-2009; 211-230
0748-3007
CONICET Digital
CONICET
url http://hdl.handle.net/11336/78055
identifier_str_mv Goloboff, Pablo Augusto; Catalano, Santiago Andres; Mirande, Juan Marcos; Szumik, Claudia Adriana; Arias, J. Salvador; et al.; Phylogenetic analysis of 73 060 taxa corroborates major eukaryotic groups; Wiley Blackwell Publishing, Inc; Cladistics; 25; 3; 6-2009; 211-230
0748-3007
CONICET Digital
CONICET
dc.language.none.fl_str_mv eng
language eng
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info:eu-repo/semantics/altIdentifier/url/https://onlinelibrary.wiley.com/doi/full/10.1111/j.1096-0031.2009.00255.x
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
eu_rights_str_mv openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
dc.format.none.fl_str_mv application/pdf
application/pdf
application/pdf
application/pdf
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dc.publisher.none.fl_str_mv Wiley Blackwell Publishing, Inc
publisher.none.fl_str_mv Wiley Blackwell Publishing, Inc
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instname:Consejo Nacional de Investigaciones Científicas y Técnicas
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repository.name.fl_str_mv CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicas
repository.mail.fl_str_mv dasensio@conicet.gov.ar; lcarlino@conicet.gov.ar
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