Contribution of a specific XRE family transcriptional regulator to the oleaginous phenotype in rhodococci

Autores
Hernández, Martín Alejandro; Ledesma, A.; Alvarez, Hector Manuel
Año de publicación
2022
Idioma
inglés
Tipo de recurso
documento de conferencia
Estado
versión publicada
Descripción
Oleagenicity is a property attributed to some microorganisms capable of accumulating high levels of intracellular lipids within the so-called lipid droplets (LDs). Some species of the Rhodococcus genus, such as R. opacus and R. jostii, are able to accumulate triacylglycerols (TAG) up to 60% or more of their cellular dry weight. For this reason, oleaginous rhodococci are promising microbial cell factories for the production of lipids to be used as fuels and oleochemicals. Although several genes involved in TAG biosynthesis and accumulation have been well described, it is not clear yet how these processes are regulated. Global and specific transcriptional regulators (TRs) contribute to the oleaginous phenotype in Rhodococcus. Among specific TRs, a XRE family transcriptional regulator (TR) is associated with the lipid droplet ontogeny through regulation of a structural protein coding gene. In this work, we study the role of this specific TR on lipid metabolism in oleaginous rhodococci at the physiological and molecular level. Bioinformatic analysis revealed the occurrence of this regulator only in actinobacteria. In addition, the occurrence of putative TR boxes into the promoters regions varied between oleaginous Rhodococcus strains and non-oleaginous strains. Docking studies revealed putative interactions of this specific TR with palmitic acid. In vitro and in vivo assays confirmed that the TR binding capacity to DNA is controlled by long chain fatty acids or their acyl-CoA derivatives. Glutaraldehyde (GT) cross-linker assay and limited proteolysis analysis revealed that long chain fatty acids induce oligomerization and conformational changes of TR, respectively. Furthermore, putative binding sites for this TR within upstream regions of genes coding for a lipase, an acyl-CoA dehydrogenase and the fatty acid synthase complex (FASI) were found and validated by EMSA and RT-PCR assays. Finally, deregulation of the TR levels by overexpression of the corresponding gene was used as a strategy to improved TAG biosynthesis and lipid recovery for biotechnological purposes under rich nitrogen conditions. We propose a model in which the activity of this TR is controlled by fatty acyl-CoA pools in cells according to the nutritional conditions of the environment. In addition, this protein participates in the regulatory network controlling lipid metabolism and lipid droplet formation in oleaginous rhodococci.
Fil: Hernández, Martín Alejandro. Universidad Nacional de la Patagonia "San Juan Bosco". Instituto de Biociencias de la Patagonia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Centro Nacional Patagónico. Instituto de Biociencias de la Patagonia; Argentina
Fil: Ledesma, A.. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet Noa Sur. Centro de Investigación en Biofísica Aplicada y Alimentos. - Universidad Nacional de Santiago del Estero. Centro de Investigación en Biofísica Aplicada y Alimentos; Argentina
Fil: Alvarez, Hector Manuel. Universidad Nacional de la Patagonia "San Juan Bosco". Instituto de Biociencias de la Patagonia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Centro Nacional Patagónico. Instituto de Biociencias de la Patagonia; Argentina
LVII Annual Meeting of the Argentine Society for Biochemistry and Molecular Biology Research and XVI Annual Meeting of the Argentinean Society for General Microbiology
Argentina
Sociedad Argentina de Investigación en Bioquímica y Biología Molecular
Asociación Civil de Microbiología General
Materia
RHODOCOCCUS
REGULATION
LIPIDS
Nivel de accesibilidad
acceso abierto
Condiciones de uso
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
Repositorio
CONICET Digital (CONICET)
Institución
Consejo Nacional de Investigaciones Científicas y Técnicas
OAI Identificador
oai:ri.conicet.gov.ar:11336/152576

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network_acronym_str CONICETDig
repository_id_str 3498
network_name_str CONICET Digital (CONICET)
spelling Contribution of a specific XRE family transcriptional regulator to the oleaginous phenotype in rhodococciHernández, Martín AlejandroLedesma, A.Alvarez, Hector ManuelRHODOCOCCUSREGULATIONLIPIDShttps://purl.org/becyt/ford/1.6https://purl.org/becyt/ford/1Oleagenicity is a property attributed to some microorganisms capable of accumulating high levels of intracellular lipids within the so-called lipid droplets (LDs). Some species of the Rhodococcus genus, such as R. opacus and R. jostii, are able to accumulate triacylglycerols (TAG) up to 60% or more of their cellular dry weight. For this reason, oleaginous rhodococci are promising microbial cell factories for the production of lipids to be used as fuels and oleochemicals. Although several genes involved in TAG biosynthesis and accumulation have been well described, it is not clear yet how these processes are regulated. Global and specific transcriptional regulators (TRs) contribute to the oleaginous phenotype in Rhodococcus. Among specific TRs, a XRE family transcriptional regulator (TR) is associated with the lipid droplet ontogeny through regulation of a structural protein coding gene. In this work, we study the role of this specific TR on lipid metabolism in oleaginous rhodococci at the physiological and molecular level. Bioinformatic analysis revealed the occurrence of this regulator only in actinobacteria. In addition, the occurrence of putative TR boxes into the promoters regions varied between oleaginous Rhodococcus strains and non-oleaginous strains. Docking studies revealed putative interactions of this specific TR with palmitic acid. In vitro and in vivo assays confirmed that the TR binding capacity to DNA is controlled by long chain fatty acids or their acyl-CoA derivatives. Glutaraldehyde (GT) cross-linker assay and limited proteolysis analysis revealed that long chain fatty acids induce oligomerization and conformational changes of TR, respectively. Furthermore, putative binding sites for this TR within upstream regions of genes coding for a lipase, an acyl-CoA dehydrogenase and the fatty acid synthase complex (FASI) were found and validated by EMSA and RT-PCR assays. Finally, deregulation of the TR levels by overexpression of the corresponding gene was used as a strategy to improved TAG biosynthesis and lipid recovery for biotechnological purposes under rich nitrogen conditions. We propose a model in which the activity of this TR is controlled by fatty acyl-CoA pools in cells according to the nutritional conditions of the environment. In addition, this protein participates in the regulatory network controlling lipid metabolism and lipid droplet formation in oleaginous rhodococci.Fil: Hernández, Martín Alejandro. Universidad Nacional de la Patagonia "San Juan Bosco". Instituto de Biociencias de la Patagonia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Centro Nacional Patagónico. Instituto de Biociencias de la Patagonia; ArgentinaFil: Ledesma, A.. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet Noa Sur. Centro de Investigación en Biofísica Aplicada y Alimentos. - Universidad Nacional de Santiago del Estero. Centro de Investigación en Biofísica Aplicada y Alimentos; ArgentinaFil: Alvarez, Hector Manuel. Universidad Nacional de la Patagonia "San Juan Bosco". Instituto de Biociencias de la Patagonia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Centro Nacional Patagónico. Instituto de Biociencias de la Patagonia; ArgentinaLVII Annual Meeting of the Argentine Society for Biochemistry and Molecular Biology Research and XVI Annual Meeting of the Argentinean Society for General MicrobiologyArgentinaSociedad Argentina de Investigación en Bioquímica y Biología MolecularAsociación Civil de Microbiología GeneralTech Science Press2022info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/conferenceObjectReuniónJournalhttp://purl.org/coar/resource_type/c_5794info:ar-repo/semantics/documentoDeConferenciaapplication/pdfapplication/pdfapplication/pdfhttp://hdl.handle.net/11336/152576Contribution of a specific XRE family transcriptional regulator to the oleaginous phenotype in rhodococci; LVII Annual Meeting of the Argentine Society for Biochemistry and Molecular Biology Research and XVI Annual Meeting of the Argentinean Society for General Microbiology; Argentina; 2021; 1-30327-95451667-5746CONICET DigitalCONICETenginfo:eu-repo/semantics/altIdentifier/url/https://www.techscience.com/biocell/v46nSuppl.1Internacionalinfo:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-sa/2.5/ar/reponame:CONICET Digital (CONICET)instname:Consejo Nacional de Investigaciones Científicas y Técnicas2025-10-15T14:26:38Zoai:ri.conicet.gov.ar:11336/152576instacron:CONICETInstitucionalhttp://ri.conicet.gov.ar/Organismo científico-tecnológicoNo correspondehttp://ri.conicet.gov.ar/oai/requestdasensio@conicet.gov.ar; lcarlino@conicet.gov.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:34982025-10-15 14:26:38.554CONICET Digital (CONICET) - Consejo Nacional de Investigaciones Científicas y Técnicasfalse
dc.title.none.fl_str_mv Contribution of a specific XRE family transcriptional regulator to the oleaginous phenotype in rhodococci
title Contribution of a specific XRE family transcriptional regulator to the oleaginous phenotype in rhodococci
spellingShingle Contribution of a specific XRE family transcriptional regulator to the oleaginous phenotype in rhodococci
Hernández, Martín Alejandro
RHODOCOCCUS
REGULATION
LIPIDS
title_short Contribution of a specific XRE family transcriptional regulator to the oleaginous phenotype in rhodococci
title_full Contribution of a specific XRE family transcriptional regulator to the oleaginous phenotype in rhodococci
title_fullStr Contribution of a specific XRE family transcriptional regulator to the oleaginous phenotype in rhodococci
title_full_unstemmed Contribution of a specific XRE family transcriptional regulator to the oleaginous phenotype in rhodococci
title_sort Contribution of a specific XRE family transcriptional regulator to the oleaginous phenotype in rhodococci
dc.creator.none.fl_str_mv Hernández, Martín Alejandro
Ledesma, A.
Alvarez, Hector Manuel
author Hernández, Martín Alejandro
author_facet Hernández, Martín Alejandro
Ledesma, A.
Alvarez, Hector Manuel
author_role author
author2 Ledesma, A.
Alvarez, Hector Manuel
author2_role author
author
dc.subject.none.fl_str_mv RHODOCOCCUS
REGULATION
LIPIDS
topic RHODOCOCCUS
REGULATION
LIPIDS
purl_subject.fl_str_mv https://purl.org/becyt/ford/1.6
https://purl.org/becyt/ford/1
dc.description.none.fl_txt_mv Oleagenicity is a property attributed to some microorganisms capable of accumulating high levels of intracellular lipids within the so-called lipid droplets (LDs). Some species of the Rhodococcus genus, such as R. opacus and R. jostii, are able to accumulate triacylglycerols (TAG) up to 60% or more of their cellular dry weight. For this reason, oleaginous rhodococci are promising microbial cell factories for the production of lipids to be used as fuels and oleochemicals. Although several genes involved in TAG biosynthesis and accumulation have been well described, it is not clear yet how these processes are regulated. Global and specific transcriptional regulators (TRs) contribute to the oleaginous phenotype in Rhodococcus. Among specific TRs, a XRE family transcriptional regulator (TR) is associated with the lipid droplet ontogeny through regulation of a structural protein coding gene. In this work, we study the role of this specific TR on lipid metabolism in oleaginous rhodococci at the physiological and molecular level. Bioinformatic analysis revealed the occurrence of this regulator only in actinobacteria. In addition, the occurrence of putative TR boxes into the promoters regions varied between oleaginous Rhodococcus strains and non-oleaginous strains. Docking studies revealed putative interactions of this specific TR with palmitic acid. In vitro and in vivo assays confirmed that the TR binding capacity to DNA is controlled by long chain fatty acids or their acyl-CoA derivatives. Glutaraldehyde (GT) cross-linker assay and limited proteolysis analysis revealed that long chain fatty acids induce oligomerization and conformational changes of TR, respectively. Furthermore, putative binding sites for this TR within upstream regions of genes coding for a lipase, an acyl-CoA dehydrogenase and the fatty acid synthase complex (FASI) were found and validated by EMSA and RT-PCR assays. Finally, deregulation of the TR levels by overexpression of the corresponding gene was used as a strategy to improved TAG biosynthesis and lipid recovery for biotechnological purposes under rich nitrogen conditions. We propose a model in which the activity of this TR is controlled by fatty acyl-CoA pools in cells according to the nutritional conditions of the environment. In addition, this protein participates in the regulatory network controlling lipid metabolism and lipid droplet formation in oleaginous rhodococci.
Fil: Hernández, Martín Alejandro. Universidad Nacional de la Patagonia "San Juan Bosco". Instituto de Biociencias de la Patagonia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Centro Nacional Patagónico. Instituto de Biociencias de la Patagonia; Argentina
Fil: Ledesma, A.. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet Noa Sur. Centro de Investigación en Biofísica Aplicada y Alimentos. - Universidad Nacional de Santiago del Estero. Centro de Investigación en Biofísica Aplicada y Alimentos; Argentina
Fil: Alvarez, Hector Manuel. Universidad Nacional de la Patagonia "San Juan Bosco". Instituto de Biociencias de la Patagonia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Centro Nacional Patagónico. Instituto de Biociencias de la Patagonia; Argentina
LVII Annual Meeting of the Argentine Society for Biochemistry and Molecular Biology Research and XVI Annual Meeting of the Argentinean Society for General Microbiology
Argentina
Sociedad Argentina de Investigación en Bioquímica y Biología Molecular
Asociación Civil de Microbiología General
description Oleagenicity is a property attributed to some microorganisms capable of accumulating high levels of intracellular lipids within the so-called lipid droplets (LDs). Some species of the Rhodococcus genus, such as R. opacus and R. jostii, are able to accumulate triacylglycerols (TAG) up to 60% or more of their cellular dry weight. For this reason, oleaginous rhodococci are promising microbial cell factories for the production of lipids to be used as fuels and oleochemicals. Although several genes involved in TAG biosynthesis and accumulation have been well described, it is not clear yet how these processes are regulated. Global and specific transcriptional regulators (TRs) contribute to the oleaginous phenotype in Rhodococcus. Among specific TRs, a XRE family transcriptional regulator (TR) is associated with the lipid droplet ontogeny through regulation of a structural protein coding gene. In this work, we study the role of this specific TR on lipid metabolism in oleaginous rhodococci at the physiological and molecular level. Bioinformatic analysis revealed the occurrence of this regulator only in actinobacteria. In addition, the occurrence of putative TR boxes into the promoters regions varied between oleaginous Rhodococcus strains and non-oleaginous strains. Docking studies revealed putative interactions of this specific TR with palmitic acid. In vitro and in vivo assays confirmed that the TR binding capacity to DNA is controlled by long chain fatty acids or their acyl-CoA derivatives. Glutaraldehyde (GT) cross-linker assay and limited proteolysis analysis revealed that long chain fatty acids induce oligomerization and conformational changes of TR, respectively. Furthermore, putative binding sites for this TR within upstream regions of genes coding for a lipase, an acyl-CoA dehydrogenase and the fatty acid synthase complex (FASI) were found and validated by EMSA and RT-PCR assays. Finally, deregulation of the TR levels by overexpression of the corresponding gene was used as a strategy to improved TAG biosynthesis and lipid recovery for biotechnological purposes under rich nitrogen conditions. We propose a model in which the activity of this TR is controlled by fatty acyl-CoA pools in cells according to the nutritional conditions of the environment. In addition, this protein participates in the regulatory network controlling lipid metabolism and lipid droplet formation in oleaginous rhodococci.
publishDate 2022
dc.date.none.fl_str_mv 2022
dc.type.none.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/conferenceObject
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Journal
http://purl.org/coar/resource_type/c_5794
info:ar-repo/semantics/documentoDeConferencia
status_str publishedVersion
format conferenceObject
dc.identifier.none.fl_str_mv http://hdl.handle.net/11336/152576
Contribution of a specific XRE family transcriptional regulator to the oleaginous phenotype in rhodococci; LVII Annual Meeting of the Argentine Society for Biochemistry and Molecular Biology Research and XVI Annual Meeting of the Argentinean Society for General Microbiology; Argentina; 2021; 1-3
0327-9545
1667-5746
CONICET Digital
CONICET
url http://hdl.handle.net/11336/152576
identifier_str_mv Contribution of a specific XRE family transcriptional regulator to the oleaginous phenotype in rhodococci; LVII Annual Meeting of the Argentine Society for Biochemistry and Molecular Biology Research and XVI Annual Meeting of the Argentinean Society for General Microbiology; Argentina; 2021; 1-3
0327-9545
1667-5746
CONICET Digital
CONICET
dc.language.none.fl_str_mv eng
language eng
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dc.coverage.none.fl_str_mv Internacional
dc.publisher.none.fl_str_mv Tech Science Press
publisher.none.fl_str_mv Tech Science Press
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