Dynamic laser speckle and fuzzy mathematical morphology applied to studies of chemotaxis towards hydrocarbons
- Autores
- Nisenbaum, Melina; Bouchet, Agustina; Guzmán, Marcelo Nicolás; González, Jorge Froilán; Sendra, Gonzalo Hernán; Pastore, Juan Ignacio; Trivi, Marcelo Ricardo; Murialdo, Silvia Elena
- Año de publicación
- 2014
- Idioma
- inglés
- Tipo de recurso
- artículo
- Estado
- versión publicada
- Descripción
- The movement of the microorganisms towards a higher concentration of the chemical attractant is called positive chemotaxis and is involved in the efficiency of chemical degradation. Several studies are focused in this field related to genomics, and towards demonstrating chemotactic responses by bacteria, but there is little information related to the activity and morphology of their response. In this work, we use a recently reported dynamic speckle laser method, to process images and to distinguish motile surface patterns per area of colonisation by applying image processing techniques called fuzzy mathematical morphology (FMM). The images of bacterial colonies are usually surfaced, with vague edges and non-homogeneous grey levels. Hence, conventional image processing methods for shape analysis cannot be applied in these cases. In this paper, we propose the application FMM to solve this problem. The approach given was effective to segment, detect and also to describe colonisation patterns.
- Materia
-
Bioquímica y Biología Molecular
dynamic laser speckle
FMM
fuzzy mathematical morphology
Biodegradación Ambiental
Pseudomonas
Hidrocarburos
Ambiente
Quimiotaxis - Nivel de accesibilidad
- acceso abierto
- Condiciones de uso
- http://creativecommons.org/licenses/by-nc-nd/4.0/
- Repositorio
- Institución
- Comisión de Investigaciones Científicas de la Provincia de Buenos Aires
- OAI Identificador
- oai:digital.cic.gba.gob.ar:11746/4076
Ver los metadatos del registro completo
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Dynamic laser speckle and fuzzy mathematical morphology applied to studies of chemotaxis towards hydrocarbonsNisenbaum, MelinaBouchet, AgustinaGuzmán, Marcelo NicolásGonzález, Jorge FroilánSendra, Gonzalo HernánPastore, Juan IgnacioTrivi, Marcelo RicardoMurialdo, Silvia ElenaBioquímica y Biología Moleculardynamic laser speckleFMMfuzzy mathematical morphologyBiodegradación AmbientalPseudomonasHidrocarburosAmbienteQuimiotaxisThe movement of the microorganisms towards a higher concentration of the chemical attractant is called positive chemotaxis and is involved in the efficiency of chemical degradation. Several studies are focused in this field related to genomics, and towards demonstrating chemotactic responses by bacteria, but there is little information related to the activity and morphology of their response. In this work, we use a recently reported dynamic speckle laser method, to process images and to distinguish motile surface patterns per area of colonisation by applying image processing techniques called fuzzy mathematical morphology (FMM). The images of bacterial colonies are usually surfaced, with vague edges and non-homogeneous grey levels. Hence, conventional image processing methods for shape analysis cannot be applied in these cases. In this paper, we propose the application FMM to solve this problem. The approach given was effective to segment, detect and also to describe colonisation patterns.2014info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfhttps://digital.cic.gba.gob.ar/handle/11746/4076enginfo:eu-repo/semantics/altIdentifier/doi/10.1504/IJENVH.2014.060121info:eu-repo/semantics/openAccesshttp://creativecommons.org/licenses/by-nc-nd/4.0/reponame:CIC Digital (CICBA)instname:Comisión de Investigaciones Científicas de la Provincia de Buenos Airesinstacron:CICBA2025-09-29T13:40:19Zoai:digital.cic.gba.gob.ar:11746/4076Institucionalhttp://digital.cic.gba.gob.arOrganismo científico-tecnológicoNo correspondehttp://digital.cic.gba.gob.ar/oai/snrdmarisa.degiusti@sedici.unlp.edu.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:94412025-09-29 13:40:19.768CIC Digital (CICBA) - Comisión de Investigaciones Científicas de la Provincia de Buenos Airesfalse |
dc.title.none.fl_str_mv |
Dynamic laser speckle and fuzzy mathematical morphology applied to studies of chemotaxis towards hydrocarbons |
title |
Dynamic laser speckle and fuzzy mathematical morphology applied to studies of chemotaxis towards hydrocarbons |
spellingShingle |
Dynamic laser speckle and fuzzy mathematical morphology applied to studies of chemotaxis towards hydrocarbons Nisenbaum, Melina Bioquímica y Biología Molecular dynamic laser speckle FMM fuzzy mathematical morphology Biodegradación Ambiental Pseudomonas Hidrocarburos Ambiente Quimiotaxis |
title_short |
Dynamic laser speckle and fuzzy mathematical morphology applied to studies of chemotaxis towards hydrocarbons |
title_full |
Dynamic laser speckle and fuzzy mathematical morphology applied to studies of chemotaxis towards hydrocarbons |
title_fullStr |
Dynamic laser speckle and fuzzy mathematical morphology applied to studies of chemotaxis towards hydrocarbons |
title_full_unstemmed |
Dynamic laser speckle and fuzzy mathematical morphology applied to studies of chemotaxis towards hydrocarbons |
title_sort |
Dynamic laser speckle and fuzzy mathematical morphology applied to studies of chemotaxis towards hydrocarbons |
dc.creator.none.fl_str_mv |
Nisenbaum, Melina Bouchet, Agustina Guzmán, Marcelo Nicolás González, Jorge Froilán Sendra, Gonzalo Hernán Pastore, Juan Ignacio Trivi, Marcelo Ricardo Murialdo, Silvia Elena |
author |
Nisenbaum, Melina |
author_facet |
Nisenbaum, Melina Bouchet, Agustina Guzmán, Marcelo Nicolás González, Jorge Froilán Sendra, Gonzalo Hernán Pastore, Juan Ignacio Trivi, Marcelo Ricardo Murialdo, Silvia Elena |
author_role |
author |
author2 |
Bouchet, Agustina Guzmán, Marcelo Nicolás González, Jorge Froilán Sendra, Gonzalo Hernán Pastore, Juan Ignacio Trivi, Marcelo Ricardo Murialdo, Silvia Elena |
author2_role |
author author author author author author author |
dc.subject.none.fl_str_mv |
Bioquímica y Biología Molecular dynamic laser speckle FMM fuzzy mathematical morphology Biodegradación Ambiental Pseudomonas Hidrocarburos Ambiente Quimiotaxis |
topic |
Bioquímica y Biología Molecular dynamic laser speckle FMM fuzzy mathematical morphology Biodegradación Ambiental Pseudomonas Hidrocarburos Ambiente Quimiotaxis |
dc.description.none.fl_txt_mv |
The movement of the microorganisms towards a higher concentration of the chemical attractant is called positive chemotaxis and is involved in the efficiency of chemical degradation. Several studies are focused in this field related to genomics, and towards demonstrating chemotactic responses by bacteria, but there is little information related to the activity and morphology of their response. In this work, we use a recently reported dynamic speckle laser method, to process images and to distinguish motile surface patterns per area of colonisation by applying image processing techniques called fuzzy mathematical morphology (FMM). The images of bacterial colonies are usually surfaced, with vague edges and non-homogeneous grey levels. Hence, conventional image processing methods for shape analysis cannot be applied in these cases. In this paper, we propose the application FMM to solve this problem. The approach given was effective to segment, detect and also to describe colonisation patterns. |
description |
The movement of the microorganisms towards a higher concentration of the chemical attractant is called positive chemotaxis and is involved in the efficiency of chemical degradation. Several studies are focused in this field related to genomics, and towards demonstrating chemotactic responses by bacteria, but there is little information related to the activity and morphology of their response. In this work, we use a recently reported dynamic speckle laser method, to process images and to distinguish motile surface patterns per area of colonisation by applying image processing techniques called fuzzy mathematical morphology (FMM). The images of bacterial colonies are usually surfaced, with vague edges and non-homogeneous grey levels. Hence, conventional image processing methods for shape analysis cannot be applied in these cases. In this paper, we propose the application FMM to solve this problem. The approach given was effective to segment, detect and also to describe colonisation patterns. |
publishDate |
2014 |
dc.date.none.fl_str_mv |
2014 |
dc.type.none.fl_str_mv |
info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion http://purl.org/coar/resource_type/c_6501 info:ar-repo/semantics/articulo |
format |
article |
status_str |
publishedVersion |
dc.identifier.none.fl_str_mv |
https://digital.cic.gba.gob.ar/handle/11746/4076 |
url |
https://digital.cic.gba.gob.ar/handle/11746/4076 |
dc.language.none.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
info:eu-repo/semantics/altIdentifier/doi/10.1504/IJENVH.2014.060121 |
dc.rights.none.fl_str_mv |
info:eu-repo/semantics/openAccess http://creativecommons.org/licenses/by-nc-nd/4.0/ |
eu_rights_str_mv |
openAccess |
rights_invalid_str_mv |
http://creativecommons.org/licenses/by-nc-nd/4.0/ |
dc.format.none.fl_str_mv |
application/pdf |
dc.source.none.fl_str_mv |
reponame:CIC Digital (CICBA) instname:Comisión de Investigaciones Científicas de la Provincia de Buenos Aires instacron:CICBA |
reponame_str |
CIC Digital (CICBA) |
collection |
CIC Digital (CICBA) |
instname_str |
Comisión de Investigaciones Científicas de la Provincia de Buenos Aires |
instacron_str |
CICBA |
institution |
CICBA |
repository.name.fl_str_mv |
CIC Digital (CICBA) - Comisión de Investigaciones Científicas de la Provincia de Buenos Aires |
repository.mail.fl_str_mv |
marisa.degiusti@sedici.unlp.edu.ar |
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score |
13.070432 |