First-principles molecular dynamics simulations at solid-liquid interfaces with a continuum solvent

Autores
Sánchez, V.M.; Sued, M.; Scherlis, D.A.
Año de publicación
2009
Idioma
inglés
Tipo de recurso
artículo
Estado
versión publicada
Descripción
Continuum solvent models have become a standard technique in the context of electronic structure calculations, yet no implementations have been reported capable to perform molecular dynamics at solid-liquid interfaces. We propose here such a continuum approach in a density functional theory framework using plane-wave basis sets and periodic boundary conditions. Our work stems from a recent model designed for Car-Parrinello simulations of quantum solutes in a dielectric medium [D. A. Scherlis, J. Chem. Phys. 124, 074103 (2006)], for which the permittivity of the solvent is defined as a function of the electronic density of the solute. This strategy turns out to be inadequate for systems extended in two dimensions: the dependence of the dielectric function on the electronic density introduces a new term in the Kohn-Sham potential, which becomes unphysically large at the interfacial region, seriously affecting the convergence of the self-consistent calculations. If the dielectric medium is properly redefined as a function of the atomic coordinates, a good convergence is obtained and the constant of motion is conserved during the molecular dynamics simulations. The Poisson problem is solved using a multigrid method, and in this way Car-Parrinello molecular dynamics simulations of solid-liquid interfaces can be performed at a very moderate computational cost. This scheme is employed to investigate the acid-base equilibrium at the TiO2 -water interface. The aqueous behavior of titania surfaces has stimulated a large amount of experimental research, but many open questions remain concerning the molecular mechanisms determining the chemistry of the interface. Here we make an attempt to answer some of them, putting to the test our continuum model. © 2009 American Institute of Physics.
Fil:Sánchez, V.M. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales; Argentina.
Fil:Sued, M. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales; Argentina.
Fuente
J Chem Phys 2009;131(17)
Materia
A-density
Acid-base equilibria
Atomic coordinate
Car-Parrinello molecular dynamics simulations
Car-Parrinello simulation
Computational costs
Constant of motion
Continuum model
Continuum solvents
Dielectric functions
Dielectric medium
Electronic density
Electronic structure calculations
Experimental research
First-principles
Interfacial region
Kohn-Sham potential
Molecular dynamics simulations
Molecular mechanism
Multigrid methods
Periodic boundary conditions
Plane-wave basis set
Poisson problem
Self-consistent calculation
Solid-liquid interfaces
TiO
Two-dimension
Water interface
Continuum mechanics
Density functional theory
Dynamics
Electronic structure
Liquids
Molecular dynamics
Poisson equation
Simulators
Solvents
Titanium dioxide
Titanium oxides
Phase interfaces
Nivel de accesibilidad
acceso abierto
Condiciones de uso
http://creativecommons.org/licenses/by/2.5/ar
Repositorio
Biblioteca Digital (UBA-FCEN)
Institución
Universidad Nacional de Buenos Aires. Facultad de Ciencias Exactas y Naturales
OAI Identificador
paperaa:paper_00219606_v131_n17_p_Sanchez

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oai_identifier_str paperaa:paper_00219606_v131_n17_p_Sanchez
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network_name_str Biblioteca Digital (UBA-FCEN)
spelling First-principles molecular dynamics simulations at solid-liquid interfaces with a continuum solventSánchez, V.M.Sued, M.Scherlis, D.A.A-densityAcid-base equilibriaAtomic coordinateCar-Parrinello molecular dynamics simulationsCar-Parrinello simulationComputational costsConstant of motionContinuum modelContinuum solventsDielectric functionsDielectric mediumElectronic densityElectronic structure calculationsExperimental researchFirst-principlesInterfacial regionKohn-Sham potentialMolecular dynamics simulationsMolecular mechanismMultigrid methodsPeriodic boundary conditionsPlane-wave basis setPoisson problemSelf-consistent calculationSolid-liquid interfacesTiOTwo-dimensionWater interfaceContinuum mechanicsDensity functional theoryDynamicsElectronic structureLiquidsMolecular dynamicsPoisson equationSimulatorsSolventsTitanium dioxideTitanium oxidesPhase interfacesContinuum solvent models have become a standard technique in the context of electronic structure calculations, yet no implementations have been reported capable to perform molecular dynamics at solid-liquid interfaces. We propose here such a continuum approach in a density functional theory framework using plane-wave basis sets and periodic boundary conditions. Our work stems from a recent model designed for Car-Parrinello simulations of quantum solutes in a dielectric medium [D. A. Scherlis, J. Chem. Phys. 124, 074103 (2006)], for which the permittivity of the solvent is defined as a function of the electronic density of the solute. This strategy turns out to be inadequate for systems extended in two dimensions: the dependence of the dielectric function on the electronic density introduces a new term in the Kohn-Sham potential, which becomes unphysically large at the interfacial region, seriously affecting the convergence of the self-consistent calculations. If the dielectric medium is properly redefined as a function of the atomic coordinates, a good convergence is obtained and the constant of motion is conserved during the molecular dynamics simulations. The Poisson problem is solved using a multigrid method, and in this way Car-Parrinello molecular dynamics simulations of solid-liquid interfaces can be performed at a very moderate computational cost. This scheme is employed to investigate the acid-base equilibrium at the TiO2 -water interface. The aqueous behavior of titania surfaces has stimulated a large amount of experimental research, but many open questions remain concerning the molecular mechanisms determining the chemistry of the interface. Here we make an attempt to answer some of them, putting to the test our continuum model. © 2009 American Institute of Physics.Fil:Sánchez, V.M. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales; Argentina.Fil:Sued, M. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales; Argentina.2009info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501info:ar-repo/semantics/articuloapplication/pdfhttp://hdl.handle.net/20.500.12110/paper_00219606_v131_n17_p_SanchezJ Chem Phys 2009;131(17)reponame:Biblioteca Digital (UBA-FCEN)instname:Universidad Nacional de Buenos Aires. Facultad de Ciencias Exactas y Naturalesinstacron:UBA-FCENenginfo:eu-repo/semantics/openAccesshttp://creativecommons.org/licenses/by/2.5/ar2025-12-18T09:00:19Zpaperaa:paper_00219606_v131_n17_p_SanchezInstitucionalhttps://digital.bl.fcen.uba.ar/Universidad públicaNo correspondehttps://digital.bl.fcen.uba.ar/cgi-bin/oaiserver.cgiana@bl.fcen.uba.arArgentinaNo correspondeNo correspondeNo correspondeopendoar:18962025-12-18 09:00:21.316Biblioteca Digital (UBA-FCEN) - Universidad Nacional de Buenos Aires. Facultad de Ciencias Exactas y Naturalesfalse
dc.title.none.fl_str_mv First-principles molecular dynamics simulations at solid-liquid interfaces with a continuum solvent
title First-principles molecular dynamics simulations at solid-liquid interfaces with a continuum solvent
spellingShingle First-principles molecular dynamics simulations at solid-liquid interfaces with a continuum solvent
Sánchez, V.M.
A-density
Acid-base equilibria
Atomic coordinate
Car-Parrinello molecular dynamics simulations
Car-Parrinello simulation
Computational costs
Constant of motion
Continuum model
Continuum solvents
Dielectric functions
Dielectric medium
Electronic density
Electronic structure calculations
Experimental research
First-principles
Interfacial region
Kohn-Sham potential
Molecular dynamics simulations
Molecular mechanism
Multigrid methods
Periodic boundary conditions
Plane-wave basis set
Poisson problem
Self-consistent calculation
Solid-liquid interfaces
TiO
Two-dimension
Water interface
Continuum mechanics
Density functional theory
Dynamics
Electronic structure
Liquids
Molecular dynamics
Poisson equation
Simulators
Solvents
Titanium dioxide
Titanium oxides
Phase interfaces
title_short First-principles molecular dynamics simulations at solid-liquid interfaces with a continuum solvent
title_full First-principles molecular dynamics simulations at solid-liquid interfaces with a continuum solvent
title_fullStr First-principles molecular dynamics simulations at solid-liquid interfaces with a continuum solvent
title_full_unstemmed First-principles molecular dynamics simulations at solid-liquid interfaces with a continuum solvent
title_sort First-principles molecular dynamics simulations at solid-liquid interfaces with a continuum solvent
dc.creator.none.fl_str_mv Sánchez, V.M.
Sued, M.
Scherlis, D.A.
author Sánchez, V.M.
author_facet Sánchez, V.M.
Sued, M.
Scherlis, D.A.
author_role author
author2 Sued, M.
Scherlis, D.A.
author2_role author
author
dc.subject.none.fl_str_mv A-density
Acid-base equilibria
Atomic coordinate
Car-Parrinello molecular dynamics simulations
Car-Parrinello simulation
Computational costs
Constant of motion
Continuum model
Continuum solvents
Dielectric functions
Dielectric medium
Electronic density
Electronic structure calculations
Experimental research
First-principles
Interfacial region
Kohn-Sham potential
Molecular dynamics simulations
Molecular mechanism
Multigrid methods
Periodic boundary conditions
Plane-wave basis set
Poisson problem
Self-consistent calculation
Solid-liquid interfaces
TiO
Two-dimension
Water interface
Continuum mechanics
Density functional theory
Dynamics
Electronic structure
Liquids
Molecular dynamics
Poisson equation
Simulators
Solvents
Titanium dioxide
Titanium oxides
Phase interfaces
topic A-density
Acid-base equilibria
Atomic coordinate
Car-Parrinello molecular dynamics simulations
Car-Parrinello simulation
Computational costs
Constant of motion
Continuum model
Continuum solvents
Dielectric functions
Dielectric medium
Electronic density
Electronic structure calculations
Experimental research
First-principles
Interfacial region
Kohn-Sham potential
Molecular dynamics simulations
Molecular mechanism
Multigrid methods
Periodic boundary conditions
Plane-wave basis set
Poisson problem
Self-consistent calculation
Solid-liquid interfaces
TiO
Two-dimension
Water interface
Continuum mechanics
Density functional theory
Dynamics
Electronic structure
Liquids
Molecular dynamics
Poisson equation
Simulators
Solvents
Titanium dioxide
Titanium oxides
Phase interfaces
dc.description.none.fl_txt_mv Continuum solvent models have become a standard technique in the context of electronic structure calculations, yet no implementations have been reported capable to perform molecular dynamics at solid-liquid interfaces. We propose here such a continuum approach in a density functional theory framework using plane-wave basis sets and periodic boundary conditions. Our work stems from a recent model designed for Car-Parrinello simulations of quantum solutes in a dielectric medium [D. A. Scherlis, J. Chem. Phys. 124, 074103 (2006)], for which the permittivity of the solvent is defined as a function of the electronic density of the solute. This strategy turns out to be inadequate for systems extended in two dimensions: the dependence of the dielectric function on the electronic density introduces a new term in the Kohn-Sham potential, which becomes unphysically large at the interfacial region, seriously affecting the convergence of the self-consistent calculations. If the dielectric medium is properly redefined as a function of the atomic coordinates, a good convergence is obtained and the constant of motion is conserved during the molecular dynamics simulations. The Poisson problem is solved using a multigrid method, and in this way Car-Parrinello molecular dynamics simulations of solid-liquid interfaces can be performed at a very moderate computational cost. This scheme is employed to investigate the acid-base equilibrium at the TiO2 -water interface. The aqueous behavior of titania surfaces has stimulated a large amount of experimental research, but many open questions remain concerning the molecular mechanisms determining the chemistry of the interface. Here we make an attempt to answer some of them, putting to the test our continuum model. © 2009 American Institute of Physics.
Fil:Sánchez, V.M. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales; Argentina.
Fil:Sued, M. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales; Argentina.
description Continuum solvent models have become a standard technique in the context of electronic structure calculations, yet no implementations have been reported capable to perform molecular dynamics at solid-liquid interfaces. We propose here such a continuum approach in a density functional theory framework using plane-wave basis sets and periodic boundary conditions. Our work stems from a recent model designed for Car-Parrinello simulations of quantum solutes in a dielectric medium [D. A. Scherlis, J. Chem. Phys. 124, 074103 (2006)], for which the permittivity of the solvent is defined as a function of the electronic density of the solute. This strategy turns out to be inadequate for systems extended in two dimensions: the dependence of the dielectric function on the electronic density introduces a new term in the Kohn-Sham potential, which becomes unphysically large at the interfacial region, seriously affecting the convergence of the self-consistent calculations. If the dielectric medium is properly redefined as a function of the atomic coordinates, a good convergence is obtained and the constant of motion is conserved during the molecular dynamics simulations. The Poisson problem is solved using a multigrid method, and in this way Car-Parrinello molecular dynamics simulations of solid-liquid interfaces can be performed at a very moderate computational cost. This scheme is employed to investigate the acid-base equilibrium at the TiO2 -water interface. The aqueous behavior of titania surfaces has stimulated a large amount of experimental research, but many open questions remain concerning the molecular mechanisms determining the chemistry of the interface. Here we make an attempt to answer some of them, putting to the test our continuum model. © 2009 American Institute of Physics.
publishDate 2009
dc.date.none.fl_str_mv 2009
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
http://purl.org/coar/resource_type/c_6501
info:ar-repo/semantics/articulo
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/20.500.12110/paper_00219606_v131_n17_p_Sanchez
url http://hdl.handle.net/20.500.12110/paper_00219606_v131_n17_p_Sanchez
dc.language.none.fl_str_mv eng
language eng
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
http://creativecommons.org/licenses/by/2.5/ar
eu_rights_str_mv openAccess
rights_invalid_str_mv http://creativecommons.org/licenses/by/2.5/ar
dc.format.none.fl_str_mv application/pdf
dc.source.none.fl_str_mv J Chem Phys 2009;131(17)
reponame:Biblioteca Digital (UBA-FCEN)
instname:Universidad Nacional de Buenos Aires. Facultad de Ciencias Exactas y Naturales
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instname_str Universidad Nacional de Buenos Aires. Facultad de Ciencias Exactas y Naturales
instacron_str UBA-FCEN
institution UBA-FCEN
repository.name.fl_str_mv Biblioteca Digital (UBA-FCEN) - Universidad Nacional de Buenos Aires. Facultad de Ciencias Exactas y Naturales
repository.mail.fl_str_mv ana@bl.fcen.uba.ar
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